RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 TTC5Q8N0Z6 440 aa26.46■■□□□ 1.83
R3HCC1-210ENST00000625275 IL17REQ8NFR9 667 aa26.46■■□□□ 1.83
R3HCC1-210ENST00000625275 TGFB2P61812 414 aa26.45■■□□□ 1.82
R3HCC1-210ENST00000625275 COL15A1P39059 1388 aa26.44■■□□□ 1.82
R3HCC1-210ENST00000625275 CEMIPQ8WUJ3 1361 aa26.44■■□□□ 1.82
R3HCC1-210ENST00000625275 CCER2I3L3R5 266 aa26.44■■□□□ 1.82
R3HCC1-210ENST00000625275 FKBP8Q14318 412 aa26.44■■□□□ 1.82
R3HCC1-210ENST00000625275 PHACTR3Q96KR7 559 aa26.44■■□□□ 1.82
R3HCC1-210ENST00000625275 NRXN2Q9P2S2 1712 aa26.44■■□□□ 1.82
R3HCC1-210ENST00000625275 SCN7AQ01118 1682 aa26.43■■□□□ 1.82
R3HCC1-210ENST00000625275 U2AF1L5P0DN76 240 aaPredicted RBP26.42■■□□□ 1.82
R3HCC1-210ENST00000625275 U2AF1Q01081 240 aaKnown RBP eCLIP26.42■■□□□ 1.82
R3HCC1-210ENST00000625275 ZBTB1Q9Y2K1 713 aa26.42■■□□□ 1.82
R3HCC1-210ENST00000625275 ATP10DQ9P241 1426 aa26.42■■□□□ 1.82
R3HCC1-210ENST00000625275 ZPR1O75312 459 aa26.42■■□□□ 1.82
R3HCC1-210ENST00000625275 DDR1Q08345 913 aa26.42■■□□□ 1.82
R3HCC1-210ENST00000625275 ADCY9O60503 1353 aa26.41■■□□□ 1.82
R3HCC1-210ENST00000625275 HEG1Q9ULI3 1381 aa26.4■■□□□ 1.82
R3HCC1-210ENST00000625275 DLEC1Q9Y238 1755 aa26.4■■□□□ 1.82
R3HCC1-210ENST00000625275 A0A0G2JLW4 131 aa26.4■■□□□ 1.82
R3HCC1-210ENST00000625275 ZNF790Q6PG37 636 aa26.4■■□□□ 1.82
R3HCC1-210ENST00000625275 USPL1Q5W0Q7 1092 aa26.39■■□□□ 1.82
R3HCC1-210ENST00000625275 ZNF496Q96IT1 587 aaPredicted RBP26.39■■□□□ 1.82
R3HCC1-210ENST00000625275 STARD3NLO95772 234 aa26.38■■□□□ 1.81
R3HCC1-210ENST00000625275 DPEP1P16444 411 aa26.38■■□□□ 1.81
R3HCC1-210ENST00000625275 NARFQ9UHQ1 456 aa26.38■■□□□ 1.81
R3HCC1-210ENST00000625275 GIGYF1O75420 1035 aaPredicted RBP26.37■■□□□ 1.81
R3HCC1-210ENST00000625275 FCHSD2O94868 740 aa26.37■■□□□ 1.81
R3HCC1-210ENST00000625275 PNISRQ8TF01 805 aaKnown RBP26.37■■□□□ 1.81
R3HCC1-210ENST00000625275 WDR43Q15061 677 aaKnown RBP eCLIP26.36■■□□□ 1.81
R3HCC1-210ENST00000625275 BCS1LQ9Y276 419 aa26.36■■□□□ 1.81
R3HCC1-210ENST00000625275 BCORQ6W2J9 1755 aa26.36■■□□□ 1.81
R3HCC1-210ENST00000625275 POLRMTO00411 1230 aaKnown RBP26.36■■□□□ 1.81
R3HCC1-210ENST00000625275 TM4SF1P30408 202 aa26.36■■□□□ 1.81
R3HCC1-210ENST00000625275 CANXP27824 592 aaKnown RBP26.35■■□□□ 1.81
R3HCC1-210ENST00000625275 C1QTNF8P60827 252 aa26.35■■□□□ 1.81
R3HCC1-210ENST00000625275 TEX13AQ9BXU3 409 aaPredicted RBP26.35■■□□□ 1.81
R3HCC1-210ENST00000625275 FMNL2Q96PY5 1086 aa26.34■■□□□ 1.81
R3HCC1-210ENST00000625275 ADAMTS8Q9UP79 889 aa26.33■■□□□ 1.81
R3HCC1-210ENST00000625275 LAMB4A4D0S4 1761 aa26.33■■□□□ 1.81
R3HCC1-210ENST00000625275 SBF1O95248 1867 aa26.32■■□□□ 1.8
R3HCC1-210ENST00000625275 BTBD11A6QL63 1104 aa26.32■■□□□ 1.8
R3HCC1-210ENST00000625275 EIF5P55010 431 aaKnown RBP26.32■■□□□ 1.8
R3HCC1-210ENST00000625275 RTF1Q92541 710 aaKnown RBP26.32■■□□□ 1.8
R3HCC1-210ENST00000625275 ANKRD31Q8N7Z5 1873 aa26.32■■□□□ 1.8
R3HCC1-210ENST00000625275 KCNA3P22001 575 aa26.31■■□□□ 1.8
R3HCC1-210ENST00000625275 NFIXQ14938 502 aa26.31■■□□□ 1.8
R3HCC1-210ENST00000625275 BCL2L12Q9HB09 334 aa26.31■■□□□ 1.8
R3HCC1-210ENST00000625275 KDM3BQ7LBC6 1761 aa26.31■■□□□ 1.8
R3HCC1-210ENST00000625275 A0A087WZG4 1122 aa26.3■■□□□ 1.8
R3HCC1-210ENST00000625275 KCNQ3O43525 872 aa26.3■■□□□ 1.8
R3HCC1-210ENST00000625275 MCM10Q7L590 875 aa26.3■■□□□ 1.8
R3HCC1-210ENST00000625275 PIM2Q9P1W9 311 aa26.29■■□□□ 1.8
R3HCC1-210ENST00000625275 HTATSF1O43719 755 aaKnown RBP26.28■■□□□ 1.8
R3HCC1-210ENST00000625275 GPBP1L1Q9HC44 474 aaPredicted RBP26.28■■□□□ 1.8
R3HCC1-210ENST00000625275 FAM9BQ8IZU0 186 aa26.27■■□□□ 1.8
R3HCC1-210ENST00000625275 CHRNA5P30532 468 aa26.26■■□□□ 1.79
R3HCC1-210ENST00000625275 IL6STP40189 918 aaPredicted RBP26.26■■□□□ 1.79
R3HCC1-210ENST00000625275 ZNF330Q9Y3S2 320 aaPredicted RBP26.26■■□□□ 1.79
R3HCC1-210ENST00000625275 CCDC88AQ3V6T2 1871 aa26.26■■□□□ 1.79
R3HCC1-210ENST00000625275 DCTN1Q14203 1278 aa26.25■■□□□ 1.79
R3HCC1-210ENST00000625275 ARHGAP27Q6ZUM4 889 aa26.25■■□□□ 1.79
R3HCC1-210ENST00000625275 ZNF526Q8TF50 670 aaPredicted RBP26.25■■□□□ 1.79
R3HCC1-210ENST00000625275 PLEKHF1Q96S99 279 aa26.25■■□□□ 1.79
R3HCC1-210ENST00000625275 CACNA1SQ13698 1873 aa26.25■■□□□ 1.79
R3HCC1-210ENST00000625275 SERPINB2P05120 415 aa26.24■■□□□ 1.79
R3HCC1-210ENST00000625275 NEFMP07197 916 aa26.24■■□□□ 1.79
R3HCC1-210ENST00000625275 DALRD3Q5D0E6 543 aaKnown RBP26.24■■□□□ 1.79
R3HCC1-210ENST00000625275 COL11A2P13942 1736 aaPredicted RBP26.24■■□□□ 1.79
R3HCC1-210ENST00000625275 A1BGP04217 495 aa26.23■■□□□ 1.79
R3HCC1-210ENST00000625275 SENP3-EIF4A1A0A087X0R7 540 aa26.23■■□□□ 1.79
R3HCC1-210ENST00000625275 CCDC146Q8IYE0 955 aa26.23■■□□□ 1.79
R3HCC1-210ENST00000625275 CARMIL3Q8ND23 1372 aa26.22■■□□□ 1.79
R3HCC1-210ENST00000625275 BICDL1Q6ZP65 573 aa26.22■■□□□ 1.79
R3HCC1-210ENST00000625275 NPM2Q86SE8 214 aaKnown RBP26.22■■□□□ 1.79
R3HCC1-210ENST00000625275 PNNQ9H307 717 aaKnown RBP26.22■■□□□ 1.79
R3HCC1-210ENST00000625275 TBC1D2BQ9UPU7 963 aa26.22■■□□□ 1.79
R3HCC1-210ENST00000625275 SNRPA1P09661 255 aaKnown RBP26.2■■□□□ 1.78
R3HCC1-210ENST00000625275 TBC1D9BQ66K14 1250 aa26.2■■□□□ 1.78
R3HCC1-210ENST00000625275 USP16Q9Y5T5 823 aa26.2■■□□□ 1.78
R3HCC1-210ENST00000625275 PRAMEF22A3QJZ6 481 aa26.18■■□□□ 1.78
R3HCC1-210ENST00000625275 TAF7Q15545 349 aaPredicted RBP26.18■■□□□ 1.78
R3HCC1-210ENST00000625275 RUNDC1Q96C34 613 aa26.18■■□□□ 1.78
R3HCC1-210ENST00000625275 ARFGEF2Q9Y6D5 1785 aa26.18■■□□□ 1.78
R3HCC1-210ENST00000625275 MAPK8IP3Q9UPT6 1336 aa26.18■■□□□ 1.78
R3HCC1-210ENST00000625275 CAMTA2O94983 1202 aa26.17■■□□□ 1.78
R3HCC1-210ENST00000625275 DZIP3Q86Y13 1208 aaKnown RBP26.17■■□□□ 1.78
R3HCC1-210ENST00000625275 PIP4K2AP48426 406 aaPredicted RBP26.16■■□□□ 1.78
R3HCC1-210ENST00000625275 NFE2L2Q16236 605 aa26.16■■□□□ 1.78
R3HCC1-210ENST00000625275 NUP98P52948 1817 aa26.15■■□□□ 1.78
R3HCC1-210ENST00000625275 TIAM2Q8IVF5 1701 aa26.15■■□□□ 1.78
R3HCC1-210ENST00000625275 C9orf131Q5VYM1 1079 aa26.14■■□□□ 1.78
R3HCC1-210ENST00000625275 C2CD5Q86YS7 1000 aa26.14■■□□□ 1.78
R3HCC1-210ENST00000625275 DICER1Q9UPY3 1922 aaKnown RBP26.14■■□□□ 1.77
R3HCC1-210ENST00000625275 FER1L6Q2WGJ9 1857 aa26.13■■□□□ 1.77
R3HCC1-210ENST00000625275 TNRC6CQ9HCJ0 1690 aaKnown RBP26.13■■□□□ 1.77
R3HCC1-210ENST00000625275 H0YIN7 160 aa26.12■■□□□ 1.77
R3HCC1-210ENST00000625275 PRR5LQ6MZQ0 368 aa26.12■■□□□ 1.77
R3HCC1-210ENST00000625275 MIS18AQ9NYP9 233 aa26.12■■□□□ 1.77
R3HCC1-210ENST00000625275 SETDB2Q96T68 719 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms