RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 SLKQ9H2G2 1235 aaPredicted RBP24.36■■□□□ 1.49
PCDHB11-202ENST00000624887 SALL3Q9BXA9 1300 aa24.36■■□□□ 1.49
PCDHB11-202ENST00000624887 PDE1AP54750 535 aa24.36■■□□□ 1.49
PCDHB11-202ENST00000624887 ZNF790Q6PG37 636 aa24.36■■□□□ 1.49
PCDHB11-202ENST00000624887 PRAMEF22A3QJZ6 481 aa24.35■■□□□ 1.49
PCDHB11-202ENST00000624887 SNX21Q969T3 373 aa24.35■■□□□ 1.49
PCDHB11-202ENST00000624887 HYPKQ9NX55 129 aa24.35■■□□□ 1.49
PCDHB11-202ENST00000624887 PROSER3Q2NL68 480 aa24.34■■□□□ 1.49
PCDHB11-202ENST00000624887 KIF2CQ99661 725 aa24.34■■□□□ 1.49
PCDHB11-202ENST00000624887 HSCBQ8IWL3 235 aa24.34■■□□□ 1.49
PCDHB11-202ENST00000624887 MRC1P22897 1456 aa24.34■■□□□ 1.49
PCDHB11-202ENST00000624887 NBPF7P0C2Y1 421 aaPredicted RBP24.33■■□□□ 1.49
PCDHB11-202ENST00000624887 POLA2Q14181 598 aa24.33■■□□□ 1.49
PCDHB11-202ENST00000624887 KSR2Q6VAB6 950 aa24.33■■□□□ 1.48
PCDHB11-202ENST00000624887 NFATC2IPQ8NCF5 419 aa24.33■■□□□ 1.48
PCDHB11-202ENST00000624887 DCAF5Q96JK2 942 aa24.33■■□□□ 1.48
PCDHB11-202ENST00000624887 DDX21Q9NR30 783 aaKnown RBP eCLIP24.33■■□□□ 1.48
PCDHB11-202ENST00000624887 CASC1Q6TDU7 716 aa24.32■■□□□ 1.48
PCDHB11-202ENST00000624887 PPP1R42Q7Z4L9 355 aa24.32■■□□□ 1.48
PCDHB11-202ENST00000624887 CYP27B1O15528 508 aa24.31■■□□□ 1.48
PCDHB11-202ENST00000624887 ALDH1L1O75891 902 aa24.31■■□□□ 1.48
PCDHB11-202ENST00000624887 SLC39A6Q13433 755 aa24.31■■□□□ 1.48
PCDHB11-202ENST00000624887 MAP3K2Q9Y2U5 619 aa24.31■■□□□ 1.48
PCDHB11-202ENST00000624887 C5P01031 1676 aa24.3■■□□□ 1.48
PCDHB11-202ENST00000624887 HSP90AB1P08238 724 aaKnown RBP24.3■■□□□ 1.48
PCDHB11-202ENST00000624887 TUBGCP6Q96RT7 1819 aa24.3■■□□□ 1.48
PCDHB11-202ENST00000624887 ROBO1Q9Y6N7 1651 aa24.3■■□□□ 1.48
PCDHB11-202ENST00000624887 RAB11FIP3O75154 756 aa24.29■■□□□ 1.48
PCDHB11-202ENST00000624887 FRAT2O75474 233 aaPredicted RBP24.29■■□□□ 1.48
PCDHB11-202ENST00000624887 MX1P20591 662 aa24.29■■□□□ 1.48
PCDHB11-202ENST00000624887 PDIA6Q15084 440 aa24.29■■□□□ 1.48
PCDHB11-202ENST00000624887 PRDM11Q9NQV5 511 aa24.29■■□□□ 1.48
PCDHB11-202ENST00000624887 STAP2Q9UGK3 403 aa24.28■■□□□ 1.48
PCDHB11-202ENST00000624887 WDR17Q8IZU2 1322 aa24.28■■□□□ 1.48
PCDHB11-202ENST00000624887 SRGAP3O43295 1099 aa24.27■■□□□ 1.48
PCDHB11-202ENST00000624887 DDX58O95786 925 aaKnown RBP24.27■■□□□ 1.48
PCDHB11-202ENST00000624887 PARP4Q9UKK3 1724 aaKnown RBP24.27■■□□□ 1.48
PCDHB11-202ENST00000624887 USP26Q9BXU7 913 aa24.27■■□□□ 1.48
PCDHB11-202ENST00000624887 ABCA3Q99758 1704 aa24.26■■□□□ 1.47
PCDHB11-202ENST00000624887 AHDC1Q5TGY3 1603 aaPredicted RBP24.26■■□□□ 1.47
PCDHB11-202ENST00000624887 SURF6O75683 361 aaKnown RBP24.25■■□□□ 1.47
PCDHB11-202ENST00000624887 MTX1Q13505 466 aa24.25■■□□□ 1.47
PCDHB11-202ENST00000624887 AOX1Q06278 1338 aa24.25■■□□□ 1.47
PCDHB11-202ENST00000624887 SPRYD3Q8NCJ5 442 aa24.25■■□□□ 1.47
PCDHB11-202ENST00000624887 LINS1Q8NG48 757 aa24.25■■□□□ 1.47
PCDHB11-202ENST00000624887 ZNF496Q96IT1 587 aaPredicted RBP24.25■■□□□ 1.47
PCDHB11-202ENST00000624887 HDAC5Q9UQL6 1122 aa24.25■■□□□ 1.47
PCDHB11-202ENST00000624887 C9orf78Q9NZ63 289 aaPredicted RBP24.24■■□□□ 1.47
PCDHB11-202ENST00000624887 COL5A2P05997 1499 aaPredicted RBP24.24■■□□□ 1.47
PCDHB11-202ENST00000624887 TTC5Q8N0Z6 440 aa24.23■■□□□ 1.47
PCDHB11-202ENST00000624887 TSHZ3Q63HK5 1081 aa24.23■■□□□ 1.47
PCDHB11-202ENST00000624887 RHPN1Q8TCX5 695 aa24.23■■□□□ 1.47
PCDHB11-202ENST00000624887 REC8O95072 547 aa24.22■■□□□ 1.47
PCDHB11-202ENST00000624887 SNRPA1P09661 255 aaKnown RBP24.22■■□□□ 1.47
PCDHB11-202ENST00000624887 CWF19L2Q2TBE0 894 aaKnown RBP24.22■■□□□ 1.47
PCDHB11-202ENST00000624887 HSP90AB4PQ58FF6 505 aa24.22■■□□□ 1.47
PCDHB11-202ENST00000624887 KIF1BPQ96EK5 621 aa24.22■■□□□ 1.47
PCDHB11-202ENST00000624887 TOM1L2Q6ZVM7 507 aa24.22■■□□□ 1.47
PCDHB11-202ENST00000624887 FMNL2Q96PY5 1086 aa24.22■■□□□ 1.47
PCDHB11-202ENST00000624887 CHMP5Q9NZZ3 219 aa24.22■■□□□ 1.47
PCDHB11-202ENST00000624887 UTYO14607 1347 aa24.21■■□□□ 1.47
PCDHB11-202ENST00000624887 ERC2O15083 957 aa24.21■■□□□ 1.47
PCDHB11-202ENST00000624887 CABP4P57796 275 aa24.21■■□□□ 1.47
PCDHB11-202ENST00000624887 AIMP1Q12904 312 aaKnown RBP24.21■■□□□ 1.47
PCDHB11-202ENST00000624887 IL1RAPL2Q9NP60 686 aa24.21■■□□□ 1.47
PCDHB11-202ENST00000624887 PCDH11XQ9BZA7 1347 aa24.2■■□□□ 1.46
PCDHB11-202ENST00000624887 PCDH11YQ9BZA8 1340 aa24.2■■□□□ 1.46
PCDHB11-202ENST00000624887 RBM42Q9BTD8 480 aaKnown RBP24.2■■□□□ 1.46
PCDHB11-202ENST00000624887 GRM8O00222 908 aa24.19■■□□□ 1.46
PCDHB11-202ENST00000624887 RABEP1Q15276 862 aa24.19■■□□□ 1.46
PCDHB11-202ENST00000624887 LARP1Q6PKG0 1096 aaKnown RBP24.19■■□□□ 1.46
PCDHB11-202ENST00000624887 ZCRB1Q8TBF4 217 aaKnown RBP24.19■■□□□ 1.46
PCDHB11-202ENST00000624887 CD2BP2O95400 341 aaKnown RBP24.18■■□□□ 1.46
PCDHB11-202ENST00000624887 RIC3Q7Z5B4 369 aa24.18■■□□□ 1.46
PCDHB11-202ENST00000624887 USP16Q9Y5T5 823 aa24.18■■□□□ 1.46
PCDHB11-202ENST00000624887 MYL6BP14649 208 aa24.18■■□□□ 1.46
PCDHB11-202ENST00000624887 DDIT3P35638 169 aa24.18■■□□□ 1.46
PCDHB11-202ENST00000624887 LRP10Q7Z4F1 713 aa24.18■■□□□ 1.46
PCDHB11-202ENST00000624887 XAGE3Q8WTP9 111 aa24.18■■□□□ 1.46
PCDHB11-202ENST00000624887 CARD10Q9BWT7 1032 aa24.18■■□□□ 1.46
PCDHB11-202ENST00000624887 K7ELQ4 463 aaPredicted RBP24.17■■□□□ 1.46
PCDHB11-202ENST00000624887 TOM1O60784 492 aa24.17■■□□□ 1.46
PCDHB11-202ENST00000624887 GLI3P10071 1580 aa24.17■■□□□ 1.46
PCDHB11-202ENST00000624887 IGKV5-2P06315 115 aa24.16■■□□□ 1.46
PCDHB11-202ENST00000624887 COPS6Q7L5N1 327 aa24.16■■□□□ 1.46
PCDHB11-202ENST00000624887 NUTM1Q86Y26 1132 aa24.16■■□□□ 1.46
PCDHB11-202ENST00000624887 LAMB4A4D0S4 1761 aa24.16■■□□□ 1.46
PCDHB11-202ENST00000624887 TRIM6-TRIM34B2RNG4 842 aa24.15■■□□□ 1.46
PCDHB11-202ENST00000624887 NEXNQ0ZGT2 675 aa24.15■■□□□ 1.46
PCDHB11-202ENST00000624887 IL2RBP14784 551 aa24.14■■□□□ 1.46
PCDHB11-202ENST00000624887 RILPL2Q969X0 211 aa24.14■■□□□ 1.46
PCDHB11-202ENST00000624887 ESYT1Q9BSJ8 1104 aa24.14■■□□□ 1.46
PCDHB11-202ENST00000624887 METTL22Q9BUU2 404 aaPredicted RBP24.14■■□□□ 1.46
PCDHB11-202ENST00000624887 ERVV-2B6SEH9 535 aa24.14■■□□□ 1.45
PCDHB11-202ENST00000624887 CHMLP26374 656 aa24.14■■□□□ 1.45
PCDHB11-202ENST00000624887 NKX1-1Q15270 411 aaPredicted RBP24.14■■□□□ 1.45
PCDHB11-202ENST00000624887 KAZALD1Q96I82 304 aa24.14■■□□□ 1.45
PCDHB11-202ENST00000624887 SUCLG2Q96I99 432 aa24.14■■□□□ 1.45
PCDHB11-202ENST00000624887 PI4K2BQ8TCG2 481 aa24.13■■□□□ 1.45
PCDHB11-202ENST00000624887 COL22A1Q8NFW1 1626 aaPredicted RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms