RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 HTATSF1O43719 755 aaKnown RBP10.49□□□□□ -0.73
VCL-207ENST00000624354 AMPHP49418 695 aa10.49□□□□□ -0.73
VCL-207ENST00000624354 IL17RAQ96F46 866 aa10.49□□□□□ -0.73
VCL-207ENST00000624354 BCL11BQ9C0K0 894 aaPredicted RBP10.49□□□□□ -0.73
VCL-207ENST00000624354 AOX1Q06278 1338 aa10.49□□□□□ -0.73
VCL-207ENST00000624354 FOXD4L6Q3SYB3 417 aaPredicted RBP10.48□□□□□ -0.73
VCL-207ENST00000624354 FOXD4L3Q6VB84 417 aaPredicted RBP10.48□□□□□ -0.73
VCL-207ENST00000624354 NECTIN2Q92692 538 aa10.48□□□□□ -0.73
VCL-207ENST00000624354 LETM1O95202 739 aaPredicted RBP10.48□□□□□ -0.73
VCL-207ENST00000624354 UBTFL1P0CB47 393 aaPredicted RBP10.48□□□□□ -0.73
VCL-207ENST00000624354 CBX1P83916 185 aa10.48□□□□□ -0.73
VCL-207ENST00000624354 UNC5CLQ8IV45 518 aa10.48□□□□□ -0.73
VCL-207ENST00000624354 EYA1Q99502 592 aa10.48□□□□□ -0.73
VCL-207ENST00000624354 TTC21AQ8NDW8 1320 aa10.48□□□□□ -0.73
VCL-207ENST00000624354 SBNO1A3KN83 1393 aa10.48□□□□□ -0.73
VCL-207ENST00000624354 KDRP35968 1356 aa10.48□□□□□ -0.73
VCL-207ENST00000624354 EID1Q9Y6B2 187 aa10.48□□□□□ -0.73
VCL-207ENST00000624354 LMOD2Q6P5Q4 547 aa10.47□□□□□ -0.73
VCL-207ENST00000624354 GDPD2Q9HCC8 539 aa10.47□□□□□ -0.73
VCL-207ENST00000624354 IL1RAPL2Q9NP60 686 aa10.47□□□□□ -0.73
VCL-207ENST00000624354 IGSF1Q8N6C5 1336 aa10.47□□□□□ -0.73
VCL-207ENST00000624354 GNAT3A8MTJ3 354 aa10.47□□□□□ -0.73
VCL-207ENST00000624354 HSPA4P34932 840 aa10.47□□□□□ -0.73
VCL-207ENST00000624354 DNTTIP2Q5QJE6 756 aaKnown RBP10.47□□□□□ -0.73
VCL-207ENST00000624354 FAM184AQ8NB25 1140 aa10.47□□□□□ -0.73
VCL-207ENST00000624354 SOS1Q07889 1333 aaPredicted RBP10.47□□□□□ -0.73
VCL-207ENST00000624354 USP48Q86UV5 1035 aa10.46□□□□□ -0.73
VCL-207ENST00000624354 USP44Q9H0E7 712 aa10.46□□□□□ -0.73
VCL-207ENST00000624354 NAP1L2Q9ULW6 460 aaPredicted RBP10.46□□□□□ -0.73
VCL-207ENST00000624354 RGPD1P0DJD0 1748 aa10.46□□□□□ -0.73
VCL-207ENST00000624354 PEAK1Q9H792 1746 aa10.46□□□□□ -0.73
VCL-207ENST00000624354 TMEM2Q9UHN6 1383 aa10.46□□□□□ -0.73
VCL-207ENST00000624354 RAB11FIP3O75154 756 aa10.46□□□□□ -0.73
VCL-207ENST00000624354 MYRIPQ8NFW9 859 aa10.46□□□□□ -0.73
VCL-207ENST00000624354 GADD45BO75293 160 aaPredicted RBP10.46□□□□□ -0.74
VCL-207ENST00000624354 SSH3Q8TE77 659 aa10.46□□□□□ -0.74
VCL-207ENST00000624354 SURF6O75683 361 aaKnown RBP10.45□□□□□ -0.74
VCL-207ENST00000624354 PDIA4P13667 645 aaKnown RBP10.45□□□□□ -0.74
VCL-207ENST00000624354 NUTM1Q86Y26 1132 aa10.45□□□□□ -0.74
VCL-207ENST00000624354 NGDNQ8NEJ9 315 aaKnown RBP10.45□□□□□ -0.74
VCL-207ENST00000624354 KIAA2012Q0VF49 1180 aa10.45□□□□□ -0.74
VCL-207ENST00000624354 UVSSAQ2YD98 709 aa10.45□□□□□ -0.74
VCL-207ENST00000624354 IL25Q9H293 177 aa10.45□□□□□ -0.74
VCL-207ENST00000624354 AMOTL2Q9Y2J4 779 aa10.45□□□□□ -0.74
VCL-207ENST00000624354 RAD50Q92878 1312 aa10.44□□□□□ -0.74
VCL-207ENST00000624354 SGSM2O43147 1006 aa10.44□□□□□ -0.74
VCL-207ENST00000624354 TAF7Q15545 349 aaPredicted RBP10.44□□□□□ -0.74
VCL-207ENST00000624354 HDGFL1Q5TGJ6 251 aa10.44□□□□□ -0.74
VCL-207ENST00000624354 TMEM87AQ8NBN3 555 aa10.44□□□□□ -0.74
VCL-207ENST00000624354 BABAM1Q9NWV8 329 aa10.44□□□□□ -0.74
VCL-207ENST00000624354 ADAMTS13Q76LX8 1427 aa10.44□□□□□ -0.74
VCL-207ENST00000624354 MAP4K4O95819 1239 aaPredicted RBP10.44□□□□□ -0.74
VCL-207ENST00000624354 CCDC183Q5T5S1 534 aa10.44□□□□□ -0.74
VCL-207ENST00000624354 PPP1R42Q7Z4L9 355 aa10.44□□□□□ -0.74
VCL-207ENST00000624354 CNTROBQ8N137 903 aa10.44□□□□□ -0.74
VCL-207ENST00000624354 MPNDQ8N594 471 aa10.44□□□□□ -0.74
VCL-207ENST00000624354 RHPN1Q8TCX5 695 aa10.44□□□□□ -0.74
VCL-207ENST00000624354 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.44□□□□□ -0.74
VCL-207ENST00000624354 KIF1BPQ96EK5 621 aa10.43□□□□□ -0.74
VCL-207ENST00000624354 ATP6V1DQ9Y5K8 247 aa10.43□□□□□ -0.74
VCL-207ENST00000624354 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.43□□□□□ -0.74
VCL-207ENST00000624354 ZSCAN22P10073 491 aaPredicted RBP10.43□□□□□ -0.74
VCL-207ENST00000624354 HMGN5P82970 282 aaKnown RBP10.43□□□□□ -0.74
VCL-207ENST00000624354 NALCNQ8IZF0 1738 aa10.43□□□□□ -0.74
VCL-207ENST00000624354 THEMISQ8N1K5 641 aaPredicted RBP10.43□□□□□ -0.74
VCL-207ENST00000624354 PRIMPOLQ96LW4 560 aa10.43□□□□□ -0.74
VCL-207ENST00000624354 SNX14Q9Y5W7 946 aa10.43□□□□□ -0.74
VCL-207ENST00000624354 PXDNLA1KZ92 1463 aa10.43□□□□□ -0.74
VCL-207ENST00000624354 KCNA6P17658 529 aa10.43□□□□□ -0.74
VCL-207ENST00000624354 IL17REQ8NFR9 667 aa10.43□□□□□ -0.74
VCL-207ENST00000624354 PI4K2BQ8TCG2 481 aa10.43□□□□□ -0.74
VCL-207ENST00000624354 LIMCH1Q9UPQ0 1083 aa10.43□□□□□ -0.74
VCL-207ENST00000624354 CEP170BQ9Y4F5 1589 aaPredicted RBP10.42□□□□□ -0.74
VCL-207ENST00000624354 SRGAP3O43295 1099 aa10.42□□□□□ -0.74
VCL-207ENST00000624354 STX6O43752 255 aa10.42□□□□□ -0.74
VCL-207ENST00000624354 AK2P54819 239 aa10.42□□□□□ -0.74
VCL-207ENST00000624354 UBE2HP62256 183 aa10.42□□□□□ -0.74
VCL-207ENST00000624354 TAF3Q5VWG9 929 aa10.42□□□□□ -0.74
VCL-207ENST00000624354 SMC3Q9UQE7 1217 aa10.42□□□□□ -0.74
VCL-207ENST00000624354 CNPY2Q9Y2B0 182 aa10.42□□□□□ -0.74
VCL-207ENST00000624354 MAP3K5Q99683 1374 aa10.42□□□□□ -0.74
VCL-207ENST00000624354 NLRP6P59044 892 aa10.42□□□□□ -0.74
VCL-207ENST00000624354 POLA2Q14181 598 aa10.42□□□□□ -0.74
VCL-207ENST00000624354 ZNF710Q8N1W2 664 aa10.42□□□□□ -0.74
VCL-207ENST00000624354 TSC1Q92574 1164 aa10.42□□□□□ -0.74
VCL-207ENST00000624354 DDX17Q92841 729 aaKnown RBP10.42□□□□□ -0.74
VCL-207ENST00000624354 TTC14Q96N46 770 aa10.42□□□□□ -0.74
VCL-207ENST00000624354 PHAXQ9H814 394 aaKnown RBP10.42□□□□□ -0.74
VCL-207ENST00000624354 USP25Q9UHP3 1055 aa10.42□□□□□ -0.74
VCL-207ENST00000624354 RPAP1Q9BWH6 1393 aaPredicted RBP10.42□□□□□ -0.74
VCL-207ENST00000624354 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.42□□□□□ -0.74
VCL-207ENST00000624354 HSP90AB4PQ58FF6 505 aa10.41□□□□□ -0.74
VCL-207ENST00000624354 LSG1Q9H089 658 aaKnown RBP10.41□□□□□ -0.74
VCL-207ENST00000624354 TOPAZ1Q8N9V7 1692 aa10.41□□□□□ -0.74
VCL-207ENST00000624354 PLEKHG1Q9ULL1 1385 aa10.41□□□□□ -0.74
VCL-207ENST00000624354 KDM4FA0A1W2PPD8 638 aa10.41□□□□□ -0.74
VCL-207ENST00000624354 SYT1P21579 422 aa10.41□□□□□ -0.74
VCL-207ENST00000624354 ATP2B3Q16720 1220 aa10.41□□□□□ -0.74
VCL-207ENST00000624354 JARID2Q92833 1246 aaPredicted RBP10.41□□□□□ -0.74
VCL-207ENST00000624354 TMEM51Q9NW97 253 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms