RNA–Protein interactions for RNA: ENST00000622308.4

SPPL2B-214, Transcript of signal peptide peptidase like 2B, humanhuman

TSL 1 (best)

Gene SPPL2B, Length 749 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2B-214ENST00000622308 ZBTB1Q9Y2K1 713 aa23.36■■□□□ 1.33
SPPL2B-214ENST00000622308 SCN11AQ9UI33 1791 aa23.36■■□□□ 1.33
SPPL2B-214ENST00000622308 ARFGEF1Q9Y6D6 1849 aa23.36■■□□□ 1.33
SPPL2B-214ENST00000622308 HTRA3P83110 453 aa23.35■■□□□ 1.33
SPPL2B-214ENST00000622308 MTHFSDQ2M296 383 aaKnown RBP23.35■■□□□ 1.33
SPPL2B-214ENST00000622308 KDM2BQ8NHM5 1336 aa23.33■■□□□ 1.33
SPPL2B-214ENST00000622308 COL15A1P39059 1388 aa23.33■■□□□ 1.33
SPPL2B-214ENST00000622308 PRELPP51888 382 aa23.33■■□□□ 1.33
SPPL2B-214ENST00000622308 RRAGCQ9HB90 399 aa23.33■■□□□ 1.33
SPPL2B-214ENST00000622308 RASSF7Q02833 373 aa23.32■■□□□ 1.32
SPPL2B-214ENST00000622308 FSTL1Q12841 308 aa23.32■■□□□ 1.32
SPPL2B-214ENST00000622308 KIF7Q2M1P5 1343 aa23.32■■□□□ 1.32
SPPL2B-214ENST00000622308 PER1O15534 1290 aaPredicted RBP23.31■■□□□ 1.32
SPPL2B-214ENST00000622308 SERPINB2P05120 415 aa23.31■■□□□ 1.32
SPPL2B-214ENST00000622308 C16orf71Q8IYS4 520 aaPredicted RBP23.31■■□□□ 1.32
SPPL2B-214ENST00000622308 VSIG10Q8N0Z9 540 aa23.31■■□□□ 1.32
SPPL2B-214ENST00000622308 KLRG1Q96E93 195 aa23.28■■□□□ 1.32
SPPL2B-214ENST00000622308 CARMIL3Q8ND23 1372 aa23.27■■□□□ 1.32
SPPL2B-214ENST00000622308 DIAPH1O60610 1272 aaKnown RBP23.27■■□□□ 1.32
SPPL2B-214ENST00000622308 CANXP27824 592 aaKnown RBP23.27■■□□□ 1.32
SPPL2B-214ENST00000622308 EIF5P55010 431 aaKnown RBP23.27■■□□□ 1.32
SPPL2B-214ENST00000622308 JMYQ8N9B5 988 aa23.27■■□□□ 1.32
SPPL2B-214ENST00000622308 NRXN2Q9P2S2 1712 aa23.26■■□□□ 1.31
SPPL2B-214ENST00000622308 LMNB1P20700 586 aa23.26■■□□□ 1.31
SPPL2B-214ENST00000622308 TTLL6Q8N841 843 aa23.26■■□□□ 1.31
SPPL2B-214ENST00000622308 ZC3H4Q9UPT8 1303 aaKnown RBP23.26■■□□□ 1.31
SPPL2B-214ENST00000622308 WDR90Q96KV7 1748 aa23.25■■□□□ 1.31
SPPL2B-214ENST00000622308 C2CD5Q86YS7 1000 aa23.25■■□□□ 1.31
SPPL2B-214ENST00000622308 CC2D1BQ5T0F9 858 aaKnown RBP23.24■■□□□ 1.31
SPPL2B-214ENST00000622308 GLTPD2A6NH11 291 aa23.23■■□□□ 1.31
SPPL2B-214ENST00000622308 NFKBIEO00221 500 aa23.23■■□□□ 1.31
SPPL2B-214ENST00000622308 BICDL1Q6ZP65 573 aa23.23■■□□□ 1.31
SPPL2B-214ENST00000622308 IL17REQ8NFR9 667 aa23.23■■□□□ 1.31
SPPL2B-214ENST00000622308 CCER1Q8TC90 406 aaPredicted RBP23.23■■□□□ 1.31
SPPL2B-214ENST00000622308 ZNF496Q96IT1 587 aaPredicted RBP23.23■■□□□ 1.31
SPPL2B-214ENST00000622308 AFDNP55196 1824 aaKnown RBP23.22■■□□□ 1.31
SPPL2B-214ENST00000622308 SBF1O95248 1867 aa23.22■■□□□ 1.31
SPPL2B-214ENST00000622308 STARD3NLO95772 234 aa23.22■■□□□ 1.31
SPPL2B-214ENST00000622308 SMC1BQ8NDV3 1235 aa23.22■■□□□ 1.31
SPPL2B-214ENST00000622308 H0YIN7 160 aa23.21■■□□□ 1.31
SPPL2B-214ENST00000622308 TBC1D9BQ66K14 1250 aa23.21■■□□□ 1.31
SPPL2B-214ENST00000622308 TTC5Q8N0Z6 440 aa23.21■■□□□ 1.31
SPPL2B-214ENST00000622308 COL3A1P02461 1466 aaPredicted RBP23.21■■□□□ 1.31
SPPL2B-214ENST00000622308 ZNF790Q6PG37 636 aa23.2■■□□□ 1.3
SPPL2B-214ENST00000622308 TNRC6CQ9HCJ0 1690 aaKnown RBP23.19■■□□□ 1.3
SPPL2B-214ENST00000622308 HEG1Q9ULI3 1381 aa23.19■■□□□ 1.3
SPPL2B-214ENST00000622308 A0A087WZG4 1122 aa23.19■■□□□ 1.3
SPPL2B-214ENST00000622308 VEGFAP15692 232 aaPredicted RBP23.19■■□□□ 1.3
SPPL2B-214ENST00000622308 PCNTO95613 3336 aa23.19■■□□□ 1.3
SPPL2B-214ENST00000622308 UBR2Q8IWV8 1755 aa23.19■■□□□ 1.3
SPPL2B-214ENST00000622308 POTECB2RU33 542 aa23.18■■□□□ 1.3
SPPL2B-214ENST00000622308 COL13A1Q5TAT6 717 aaPredicted RBP23.18■■□□□ 1.3
SPPL2B-214ENST00000622308 GNAT3A8MTJ3 354 aa23.17■■□□□ 1.3
SPPL2B-214ENST00000622308 PRR5LQ6MZQ0 368 aa23.17■■□□□ 1.3
SPPL2B-214ENST00000622308 CCDC24Q8N4L8 307 aa23.17■■□□□ 1.3
SPPL2B-214ENST00000622308 BRIP1Q9BX63 1249 aa23.17■■□□□ 1.3
SPPL2B-214ENST00000622308 TBC1D2BQ9UPU7 963 aa23.17■■□□□ 1.3
SPPL2B-214ENST00000622308 DLEC1Q9Y238 1755 aa23.16■■□□□ 1.3
SPPL2B-214ENST00000622308 NPC1L1Q9UHC9 1359 aa23.15■■□□□ 1.3
SPPL2B-214ENST00000622308 U2SURPO15042 1029 aaKnown RBP23.15■■□□□ 1.3
SPPL2B-214ENST00000622308 IL6STP40189 918 aaPredicted RBP23.15■■□□□ 1.3
SPPL2B-214ENST00000622308 TEFQ10587 303 aa23.15■■□□□ 1.3
SPPL2B-214ENST00000622308 GAS2L2Q8NHY3 880 aa23.15■■□□□ 1.3
SPPL2B-214ENST00000622308 TEX13AQ9BXU3 409 aaPredicted RBP23.15■■□□□ 1.3
SPPL2B-214ENST00000622308 KCNQ3O43525 872 aa23.14■■□□□ 1.29
SPPL2B-214ENST00000622308 C21orf2O43822 256 aa23.14■■□□□ 1.29
SPPL2B-214ENST00000622308 A1BGP04217 495 aa23.14■■□□□ 1.29
SPPL2B-214ENST00000622308 ZNF622Q969S3 477 aaKnown RBP eCLIP23.14■■□□□ 1.29
SPPL2B-214ENST00000622308 CEMIPQ8WUJ3 1361 aa23.14■■□□□ 1.29
SPPL2B-214ENST00000622308 CAMTA2O94983 1202 aa23.13■■□□□ 1.29
SPPL2B-214ENST00000622308 PDE6BP35913 854 aa23.13■■□□□ 1.29
SPPL2B-214ENST00000622308 PHACTR3Q96KR7 559 aa23.12■■□□□ 1.29
SPPL2B-214ENST00000622308 FMNL2Q96PY5 1086 aa23.12■■□□□ 1.29
SPPL2B-214ENST00000622308 ZNF219Q9P2Y4 722 aaPredicted RBP23.12■■□□□ 1.29
SPPL2B-214ENST00000622308 PDZRN3Q9UPQ7 1066 aa23.12■■□□□ 1.29
SPPL2B-214ENST00000622308 ZNF330Q9Y3S2 320 aaPredicted RBP23.12■■□□□ 1.29
SPPL2B-214ENST00000622308 VIRMAQ69YN4 1812 aaKnown RBP23.12■■□□□ 1.29
SPPL2B-214ENST00000622308 CNGB1Q14028 1251 aaPredicted RBP23.11■■□□□ 1.29
SPPL2B-214ENST00000622308 ANKRD31Q8N7Z5 1873 aa23.09■■□□□ 1.29
SPPL2B-214ENST00000622308 ERFEQ4G0M1 354 aa23.09■■□□□ 1.29
SPPL2B-214ENST00000622308 SCN7AQ01118 1682 aa23.09■■□□□ 1.29
SPPL2B-214ENST00000622308 DPY19L2Q6NUT2 758 aa23.08■■□□□ 1.29
SPPL2B-214ENST00000622308 SETDB2Q96T68 719 aa23.08■■□□□ 1.29
SPPL2B-214ENST00000622308 RSPH6AQ9H0K4 717 aa23.08■■□□□ 1.29
SPPL2B-214ENST00000622308 USP16Q9Y5T5 823 aa23.08■■□□□ 1.29
SPPL2B-214ENST00000622308 LTBP3Q9NS15 1303 aa23.08■■□□□ 1.28
SPPL2B-214ENST00000622308 BTBD11A6QL63 1104 aa23.07■■□□□ 1.28
SPPL2B-214ENST00000622308 SRGNP10124 158 aa23.07■■□□□ 1.28
SPPL2B-214ENST00000622308 CNBD1Q8NA66 436 aa23.07■■□□□ 1.28
SPPL2B-214ENST00000622308 TIAM2Q8IVF5 1701 aa23.07■■□□□ 1.28
SPPL2B-214ENST00000622308 SIPA1L3O60292 1781 aaPredicted RBP23.06■■□□□ 1.28
SPPL2B-214ENST00000622308 COL11A2P13942 1736 aaPredicted RBP23.06■■□□□ 1.28
SPPL2B-214ENST00000622308 PRAMEF22A3QJZ6 481 aa23.06■■□□□ 1.28
SPPL2B-214ENST00000622308 PRKAR2BP31323 418 aa23.06■■□□□ 1.28
SPPL2B-214ENST00000622308 PIP4K2AP48426 406 aaPredicted RBP23.06■■□□□ 1.28
SPPL2B-214ENST00000622308 STYK1Q6J9G0 422 aa23.06■■□□□ 1.28
SPPL2B-214ENST00000622308 DZIP3Q86Y13 1208 aaKnown RBP23.06■■□□□ 1.28
SPPL2B-214ENST00000622308 PRPF40BQ6NWY9 871 aaKnown RBP23.05■■□□□ 1.28
SPPL2B-214ENST00000622308 CNKSR1Q969H4 720 aa23.05■■□□□ 1.28
SPPL2B-214ENST00000622308 TAOK3Q9H2K8 898 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms