RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 ARHGEF1Q92888 912 aaKnown RBP7.62□□□□□ -1.19
FMR1-217ENST00000620828 ZNF521Q96K83 1311 aa7.62□□□□□ -1.19
FMR1-217ENST00000620828 COL15A1P39059 1388 aa7.62□□□□□ -1.19
FMR1-217ENST00000620828 ZNF316A6NFI3 1004 aaPredicted RBP7.62□□□□□ -1.19
FMR1-217ENST00000620828 ATP6V1AP38606 617 aa7.62□□□□□ -1.19
FMR1-217ENST00000620828 ZNF496Q96IT1 587 aaPredicted RBP7.62□□□□□ -1.19
FMR1-217ENST00000620828 CFAP53Q96M91 514 aa7.62□□□□□ -1.19
FMR1-217ENST00000620828 ADAMTSL1Q8N6G6 1762 aa7.62□□□□□ -1.19
FMR1-217ENST00000620828 CCDC88AQ3V6T2 1871 aa7.61□□□□□ -1.19
FMR1-217ENST00000620828 ATP10DQ9P241 1426 aa7.61□□□□□ -1.19
FMR1-217ENST00000620828 IBTKQ9P2D0 1353 aaPredicted RBP7.61□□□□□ -1.19
FMR1-217ENST00000620828 CCDC27Q2M243 656 aa7.61□□□□□ -1.19
FMR1-217ENST00000620828 SYT17Q9BSW7 474 aa7.61□□□□□ -1.19
FMR1-217ENST00000620828 PSME4Q14997 1843 aa7.61□□□□□ -1.19
FMR1-217ENST00000620828 NBPF26B4DH59 902 aa7.61□□□□□ -1.19
FMR1-217ENST00000620828 ZBTB7AO95365 584 aa7.61□□□□□ -1.19
FMR1-217ENST00000620828 NBPF10Q6P3W6 841 aaKnown RBP7.61□□□□□ -1.19
FMR1-217ENST00000620828 NBPF15Q8N660 670 aa7.61□□□□□ -1.19
FMR1-217ENST00000620828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.61□□□□□ -1.19
FMR1-217ENST00000620828 TMPOP42166 694 aaKnown RBP7.61□□□□□ -1.19
FMR1-217ENST00000620828 EIF4A1P60842 406 aaKnown RBP7.61□□□□□ -1.19
FMR1-217ENST00000620828 CHL1O00533 1208 aa7.6□□□□□ -1.19
FMR1-217ENST00000620828 DDR1Q08345 913 aa7.6□□□□□ -1.19
FMR1-217ENST00000620828 SLC39A6Q13433 755 aa7.6□□□□□ -1.19
FMR1-217ENST00000620828 DNAJC10Q8IXB1 793 aa7.6□□□□□ -1.19
FMR1-217ENST00000620828 ADAMTS8Q9UP79 889 aa7.6□□□□□ -1.19
FMR1-217ENST00000620828 CD2APQ9Y5K6 639 aa7.6□□□□□ -1.19
FMR1-217ENST00000620828 SLX4Q8IY92 1834 aa7.6□□□□□ -1.19
FMR1-217ENST00000620828 PRAMEF22A3QJZ6 481 aa7.6□□□□□ -1.19
FMR1-217ENST00000620828 POLRMTO00411 1230 aaKnown RBP7.6□□□□□ -1.19
FMR1-217ENST00000620828 KLRG2A4D1S0 409 aaPredicted RBP7.6□□□□□ -1.19
FMR1-217ENST00000620828 FHDC1Q9C0D6 1143 aaPredicted RBP7.6□□□□□ -1.19
FMR1-217ENST00000620828 MCM10Q7L590 875 aa7.59□□□□□ -1.19
FMR1-217ENST00000620828 CCDC87Q9NVE4 849 aa7.59□□□□□ -1.19
FMR1-217ENST00000620828 MYH3P11055 1940 aa7.59□□□□□ -1.19
FMR1-217ENST00000620828 CAMTA2O94983 1202 aa7.59□□□□□ -1.19
FMR1-217ENST00000620828 SYTL4Q96C24 671 aaPredicted RBP7.59□□□□□ -1.19
FMR1-217ENST00000620828 ARXQ96QS3 562 aa7.59□□□□□ -1.19
FMR1-217ENST00000620828 NUDCQ9Y266 331 aa7.59□□□□□ -1.19
FMR1-217ENST00000620828 NARFQ9UHQ1 456 aa7.59□□□□□ -1.19
FMR1-217ENST00000620828 GIGYF1O75420 1035 aaPredicted RBP7.59□□□□□ -1.19
FMR1-217ENST00000620828 NLGN2Q8NFZ4 835 aa7.59□□□□□ -1.19
FMR1-217ENST00000620828 WDR90Q96KV7 1748 aa7.59□□□□□ -1.2
FMR1-217ENST00000620828 U2AF1L5P0DN76 240 aaPredicted RBP7.58□□□□□ -1.2
FMR1-217ENST00000620828 IL6STP40189 918 aaPredicted RBP7.58□□□□□ -1.2
FMR1-217ENST00000620828 U2AF1Q01081 240 aaKnown RBP eCLIP7.58□□□□□ -1.2
FMR1-217ENST00000620828 RUNDC1Q96C34 613 aa7.58□□□□□ -1.2
FMR1-217ENST00000620828 TFCP2L1Q9NZI6 479 aa7.58□□□□□ -1.2
FMR1-217ENST00000620828 ZBTB1Q9Y2K1 713 aa7.58□□□□□ -1.2
FMR1-217ENST00000620828 CARMIL3Q8ND23 1372 aa7.58□□□□□ -1.2
FMR1-217ENST00000620828 TAF7Q15545 349 aaPredicted RBP7.58□□□□□ -1.2
FMR1-217ENST00000620828 DCTN1Q14203 1278 aa7.58□□□□□ -1.2
FMR1-217ENST00000620828 DUOX1Q9NRD9 1551 aa7.58□□□□□ -1.2
FMR1-217ENST00000620828 U2SURPO15042 1029 aaKnown RBP7.58□□□□□ -1.2
FMR1-217ENST00000620828 ATF5Q9Y2D1 282 aaPredicted RBP7.58□□□□□ -1.2
FMR1-217ENST00000620828 YBX3P16989 372 aaKnown RBP eCLIP7.57□□□□□ -1.2
FMR1-217ENST00000620828 ERBB4Q15303 1308 aa7.57□□□□□ -1.2
FMR1-217ENST00000620828 GNPATO15228 680 aa7.57□□□□□ -1.2
FMR1-217ENST00000620828 USP16Q9Y5T5 823 aa7.57□□□□□ -1.2
FMR1-217ENST00000620828 FKBP8Q14318 412 aa7.57□□□□□ -1.2
FMR1-217ENST00000620828 TEX13AQ9BXU3 409 aaPredicted RBP7.57□□□□□ -1.2
FMR1-217ENST00000620828 BTBD11A6QL63 1104 aa7.56□□□□□ -1.2
FMR1-217ENST00000620828 AK7Q96M32 723 aa7.56□□□□□ -1.2
FMR1-217ENST00000620828 FMNL2Q96PY5 1086 aa7.56□□□□□ -1.2
FMR1-217ENST00000620828 TAF1P21675 1872 aa7.56□□□□□ -1.2
FMR1-217ENST00000620828 COL4A5P29400 1685 aa7.55□□□□□ -1.2
FMR1-217ENST00000620828 TRAPPC3LQ5T215 181 aa7.55□□□□□ -1.2
FMR1-217ENST00000620828 SRP68Q9UHB9 627 aaKnown RBP7.55□□□□□ -1.2
FMR1-217ENST00000620828 RTCBQ9Y3I0 505 aaKnown RBP7.55□□□□□ -1.2
FMR1-217ENST00000620828 PNNQ9H307 717 aaKnown RBP7.55□□□□□ -1.2
FMR1-217ENST00000620828 LAMB1P07942 1786 aa7.55□□□□□ -1.2
FMR1-217ENST00000620828 HOXB7P09629 217 aa7.55□□□□□ -1.2
FMR1-217ENST00000620828 IL16Q14005 1332 aa7.55□□□□□ -1.2
FMR1-217ENST00000620828 TGFB2P61812 414 aa7.55□□□□□ -1.2
FMR1-217ENST00000620828 SNRPA1P09661 255 aaKnown RBP7.54□□□□□ -1.2
FMR1-217ENST00000620828 NLGN1Q8N2Q7 840 aa7.54□□□□□ -1.2
FMR1-217ENST00000620828 PTCD1O75127 700 aaKnown RBP7.54□□□□□ -1.2
FMR1-217ENST00000620828 THUMPD2Q9BTF0 503 aaKnown RBP7.54□□□□□ -1.2
FMR1-217ENST00000620828 NFIXQ14938 502 aa7.54□□□□□ -1.2
FMR1-217ENST00000620828 CLEC4GQ6UXB4 293 aa7.54□□□□□ -1.2
FMR1-217ENST00000620828 TRMT2AQ8IZ69 625 aaKnown RBP7.54□□□□□ -1.2
FMR1-217ENST00000620828 CFAP44Q96MT7 982 aa7.54□□□□□ -1.2
FMR1-217ENST00000620828 SPEF2Q9C093 1822 aa7.53□□□□□ -1.2
FMR1-217ENST00000620828 PRELPP51888 382 aa7.53□□□□□ -1.2
FMR1-217ENST00000620828 RBM42Q9BTD8 480 aaKnown RBP7.53□□□□□ -1.2
FMR1-217ENST00000620828 ERVV-1B6SEH8 477 aa7.53□□□□□ -1.2
FMR1-217ENST00000620828 A1BGP04217 495 aa7.53□□□□□ -1.2
FMR1-217ENST00000620828 C7orf43Q8WVR3 580 aa7.53□□□□□ -1.2
FMR1-217ENST00000620828 RIPK4P57078 832 aa7.53□□□□□ -1.2
FMR1-217ENST00000620828 USPL1Q5W0Q7 1092 aa7.53□□□□□ -1.2
FMR1-217ENST00000620828 TBC1D9BQ66K14 1250 aa7.53□□□□□ -1.2
FMR1-217ENST00000620828 ZNF34Q8IZ26 560 aa7.53□□□□□ -1.2
FMR1-217ENST00000620828 IFT57Q9NWB7 429 aa7.53□□□□□ -1.2
FMR1-217ENST00000620828 MMP10P09238 476 aa7.52□□□□□ -1.21
FMR1-217ENST00000620828 UBN2Q6ZU65 1347 aa7.52□□□□□ -1.21
FMR1-217ENST00000620828 MSL1Q68DK7 614 aa7.52□□□□□ -1.21
FMR1-217ENST00000620828 CRY2Q49AN0 593 aa7.52□□□□□ -1.21
FMR1-217ENST00000620828 MBIPQ9NS73 344 aa7.52□□□□□ -1.21
FMR1-217ENST00000620828 MIS18AQ9NYP9 233 aa7.52□□□□□ -1.21
FMR1-217ENST00000620828 ARAP2Q8WZ64 1704 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms