RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 HEG1Q9ULI3 1381 aa22.88■■□□□ 1.25
HMGN3-203ENST00000620514 CANXP27824 592 aaKnown RBP22.87■■□□□ 1.25
HMGN3-203ENST00000620514 DCTN1Q14203 1278 aa22.87■■□□□ 1.25
HMGN3-203ENST00000620514 KIAA1551Q9HCM1 1747 aa22.87■■□□□ 1.25
HMGN3-203ENST00000620514 BTBD11A6QL63 1104 aa22.86■■□□□ 1.25
HMGN3-203ENST00000620514 ZPR1O75312 459 aa22.86■■□□□ 1.25
HMGN3-203ENST00000620514 A0A0G2JLW4 131 aa22.85■■□□□ 1.25
HMGN3-203ENST00000620514 STARD3NLO95772 234 aa22.85■■□□□ 1.25
HMGN3-203ENST00000620514 RTF1Q92541 710 aaKnown RBP22.85■■□□□ 1.25
HMGN3-203ENST00000620514 FMNL2Q96PY5 1086 aa22.85■■□□□ 1.25
HMGN3-203ENST00000620514 N4BP2Q86UW6 1770 aaPredicted RBP22.84■■□□□ 1.25
HMGN3-203ENST00000620514 TM4SF1P30408 202 aa22.84■■□□□ 1.25
HMGN3-203ENST00000620514 TGFB2P61812 414 aa22.84■■□□□ 1.25
HMGN3-203ENST00000620514 NARFQ9UHQ1 456 aa22.84■■□□□ 1.25
HMGN3-203ENST00000620514 POLRMTO00411 1230 aaKnown RBP22.82■■□□□ 1.24
HMGN3-203ENST00000620514 DPEP1P16444 411 aa22.82■■□□□ 1.24
HMGN3-203ENST00000620514 EIF5P55010 431 aaKnown RBP22.82■■□□□ 1.24
HMGN3-203ENST00000620514 PLEKHF1Q96S99 279 aa22.82■■□□□ 1.24
HMGN3-203ENST00000620514 TEX13AQ9BXU3 409 aaPredicted RBP22.82■■□□□ 1.24
HMGN3-203ENST00000620514 BCL2L12Q9HB09 334 aa22.82■■□□□ 1.24
HMGN3-203ENST00000620514 HTATSF1O43719 755 aaKnown RBP22.81■■□□□ 1.24
HMGN3-203ENST00000620514 RALBP1Q15311 655 aa22.81■■□□□ 1.24
HMGN3-203ENST00000620514 A1BGP04217 495 aa22.8■■□□□ 1.24
HMGN3-203ENST00000620514 NFIXQ14938 502 aa22.8■■□□□ 1.24
HMGN3-203ENST00000620514 PRAMEF22A3QJZ6 481 aa22.79■■□□□ 1.24
HMGN3-203ENST00000620514 NEFMP07197 916 aa22.78■■□□□ 1.24
HMGN3-203ENST00000620514 BCS1LQ9Y276 419 aa22.78■■□□□ 1.24
HMGN3-203ENST00000620514 ZNF330Q9Y3S2 320 aaPredicted RBP22.78■■□□□ 1.24
HMGN3-203ENST00000620514 USP16Q9Y5T5 823 aa22.78■■□□□ 1.24
HMGN3-203ENST00000620514 DLG5Q8TDM6 1919 aa22.77■■□□□ 1.24
HMGN3-203ENST00000620514 KCNA3P22001 575 aa22.77■■□□□ 1.24
HMGN3-203ENST00000620514 A0A087WZG4 1122 aa22.76■■□□□ 1.23
HMGN3-203ENST00000620514 PIP4K2AP48426 406 aaPredicted RBP22.76■■□□□ 1.23
HMGN3-203ENST00000620514 NFE2L2Q16236 605 aa22.76■■□□□ 1.23
HMGN3-203ENST00000620514 MIS18AQ9NYP9 233 aa22.76■■□□□ 1.23
HMGN3-203ENST00000620514 TBC1D2BQ9UPU7 963 aa22.76■■□□□ 1.23
HMGN3-203ENST00000620514 IL6STP40189 918 aaPredicted RBP22.75■■□□□ 1.23
HMGN3-203ENST00000620514 TAF7Q15545 349 aaPredicted RBP22.75■■□□□ 1.23
HMGN3-203ENST00000620514 THUMPD2Q9BTF0 503 aaKnown RBP22.75■■□□□ 1.23
HMGN3-203ENST00000620514 CHRNA5P30532 468 aa22.74■■□□□ 1.23
HMGN3-203ENST00000620514 BICDL1Q6ZP65 573 aa22.74■■□□□ 1.23
HMGN3-203ENST00000620514 BRCA1P38398 1863 aaKnown RBP22.74■■□□□ 1.23
HMGN3-203ENST00000620514 ATP10DQ9P241 1426 aa22.74■■□□□ 1.23
HMGN3-203ENST00000620514 AFDNP55196 1824 aaKnown RBP22.73■■□□□ 1.23
HMGN3-203ENST00000620514 SERPINB2P05120 415 aa22.73■■□□□ 1.23
HMGN3-203ENST00000620514 SNRPA1P09661 255 aaKnown RBP22.73■■□□□ 1.23
HMGN3-203ENST00000620514 MYBBP1AQ9BQG0 1328 aaKnown RBP22.73■■□□□ 1.23
HMGN3-203ENST00000620514 MAPK8IP3Q9UPT6 1336 aa22.73■■□□□ 1.23
HMGN3-203ENST00000620514 TBC1D9BQ66K14 1250 aa22.72■■□□□ 1.23
HMGN3-203ENST00000620514 PNNQ9H307 717 aaKnown RBP22.72■■□□□ 1.23
HMGN3-203ENST00000620514 ADCY9O60503 1353 aa22.72■■□□□ 1.23
HMGN3-203ENST00000620514 SCN7AQ01118 1682 aa22.71■■□□□ 1.23
HMGN3-203ENST00000620514 NRXN2Q9P2S2 1712 aa22.71■■□□□ 1.23
HMGN3-203ENST00000620514 PIM2Q9P1W9 311 aa22.71■■□□□ 1.23
HMGN3-203ENST00000620514 CAMTA2O94983 1202 aa22.7■■□□□ 1.22
HMGN3-203ENST00000620514 CARMIL3Q8ND23 1372 aa22.69■■□□□ 1.22
HMGN3-203ENST00000620514 ARHGAP27Q6ZUM4 889 aa22.69■■□□□ 1.22
HMGN3-203ENST00000620514 NPM2Q86SE8 214 aaKnown RBP22.69■■□□□ 1.22
HMGN3-203ENST00000620514 NBPF26B4DH59 902 aa22.68■■□□□ 1.22
HMGN3-203ENST00000620514 NBPF10Q6P3W6 841 aaKnown RBP22.68■■□□□ 1.22
HMGN3-203ENST00000620514 DZIP3Q86Y13 1208 aaKnown RBP22.68■■□□□ 1.22
HMGN3-203ENST00000620514 NBPF15Q8N660 670 aa22.68■■□□□ 1.22
HMGN3-203ENST00000620514 KDM3BQ7LBC6 1761 aa22.68■■□□□ 1.22
HMGN3-203ENST00000620514 DALRD3Q5D0E6 543 aaKnown RBP22.67■■□□□ 1.22
HMGN3-203ENST00000620514 PNISRQ8TF01 805 aaKnown RBP22.67■■□□□ 1.22
HMGN3-203ENST00000620514 ZNF526Q8TF50 670 aaPredicted RBP22.66■■□□□ 1.22
HMGN3-203ENST00000620514 GIGYF1O75420 1035 aaPredicted RBP22.65■■□□□ 1.22
HMGN3-203ENST00000620514 RIPK4P57078 832 aa22.65■■□□□ 1.22
HMGN3-203ENST00000620514 CCDC146Q8IYE0 955 aa22.65■■□□□ 1.22
HMGN3-203ENST00000620514 CCDC24Q8N4L8 307 aa22.65■■□□□ 1.22
HMGN3-203ENST00000620514 ARFGEF1Q9Y6D6 1849 aa22.65■■□□□ 1.22
HMGN3-203ENST00000620514 BCORQ6W2J9 1755 aa22.65■■□□□ 1.22
HMGN3-203ENST00000620514 C1QTNF8P60827 252 aa22.64■■□□□ 1.21
HMGN3-203ENST00000620514 EIF4A1P60842 406 aaKnown RBP22.64■■□□□ 1.21
HMGN3-203ENST00000620514 PRKRIP1Q9H875 184 aaPredicted RBP22.64■■□□□ 1.21
HMGN3-203ENST00000620514 TMPOP42166 694 aaKnown RBP22.63■■□□□ 1.21
HMGN3-203ENST00000620514 PRR5LQ6MZQ0 368 aa22.63■■□□□ 1.21
HMGN3-203ENST00000620514 C2CD5Q86YS7 1000 aa22.63■■□□□ 1.21
HMGN3-203ENST00000620514 RRP7AQ9Y3A4 280 aaKnown RBP22.63■■□□□ 1.21
HMGN3-203ENST00000620514 SETDB2Q96T68 719 aa22.62■■□□□ 1.21
HMGN3-203ENST00000620514 GPBP1L1Q9HC44 474 aaPredicted RBP22.62■■□□□ 1.21
HMGN3-203ENST00000620514 LAMB4A4D0S4 1761 aa22.62■■□□□ 1.21
HMGN3-203ENST00000620514 ANKRD31Q8N7Z5 1873 aa22.61■■□□□ 1.21
HMGN3-203ENST00000620514 WDR43Q15061 677 aaKnown RBP eCLIP22.6■■□□□ 1.21
HMGN3-203ENST00000620514 NEUROD2Q15784 382 aa22.6■■□□□ 1.21
HMGN3-203ENST00000620514 DLEC1Q9Y238 1755 aa22.6■■□□□ 1.21
HMGN3-203ENST00000620514 H0YIN7 160 aa22.59■■□□□ 1.21
HMGN3-203ENST00000620514 BRIP1Q9BX63 1249 aa22.59■■□□□ 1.21
HMGN3-203ENST00000620514 TSPYL4Q9UJ04 414 aa22.59■■□□□ 1.21
HMGN3-203ENST00000620514 ADAMTS8Q9UP79 889 aa22.59■■□□□ 1.21
HMGN3-203ENST00000620514 C9orf131Q5VYM1 1079 aa22.58■■□□□ 1.21
HMGN3-203ENST00000620514 CLEC4GQ6UXB4 293 aa22.58■■□□□ 1.21
HMGN3-203ENST00000620514 NGEFQ8N5V2 710 aa22.58■■□□□ 1.21
HMGN3-203ENST00000620514 CNBD1Q8NA66 436 aa22.58■■□□□ 1.21
HMGN3-203ENST00000620514 TTLL6Q8N841 843 aa22.57■■□□□ 1.2
HMGN3-203ENST00000620514 RUNDC1Q96C34 613 aa22.57■■□□□ 1.2
HMGN3-203ENST00000620514 LMOD3Q0VAK6 560 aa22.56■■□□□ 1.2
HMGN3-203ENST00000620514 HLFQ16534 295 aa22.56■■□□□ 1.2
HMGN3-203ENST00000620514 ZNF652Q9Y2D9 606 aa22.56■■□□□ 1.2
HMGN3-203ENST00000620514 COL11A2P13942 1736 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms