RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 STK11IPQ8N1F8 1099 aa9.82□□□□□ -0.84
ALMS1-208ENST00000620466 CCDC8Q9H0W5 538 aaPredicted RBP9.82□□□□□ -0.84
ALMS1-208ENST00000620466 ZRANB1Q9UGI0 708 aa9.82□□□□□ -0.84
ALMS1-208ENST00000620466 USP25Q9UHP3 1055 aa9.82□□□□□ -0.84
ALMS1-208ENST00000620466 VAMP4O75379 141 aa9.82□□□□□ -0.84
ALMS1-208ENST00000620466 LRSAM1Q6UWE0 723 aa9.82□□□□□ -0.84
ALMS1-208ENST00000620466 PUS7Q96PZ0 661 aaKnown RBP9.82□□□□□ -0.84
ALMS1-208ENST00000620466 MYD88Q99836 296 aa9.82□□□□□ -0.84
ALMS1-208ENST00000620466 PIK3R4Q99570 1358 aa9.82□□□□□ -0.84
ALMS1-208ENST00000620466 PDIA4P13667 645 aaKnown RBP9.82□□□□□ -0.84
ALMS1-208ENST00000620466 CDR1P51861 262 aa9.82□□□□□ -0.84
ALMS1-208ENST00000620466 ATP2B2Q01814 1243 aa9.82□□□□□ -0.84
ALMS1-208ENST00000620466 TTLL5Q6EMB2 1281 aa9.82□□□□□ -0.84
ALMS1-208ENST00000620466 MAGEC2Q9UBF1 373 aaPredicted RBP9.82□□□□□ -0.84
ALMS1-208ENST00000620466 ATP7AQ04656 1500 aa9.81□□□□□ -0.84
ALMS1-208ENST00000620466 STX6O43752 255 aa9.81□□□□□ -0.84
ALMS1-208ENST00000620466 MPRIPQ6WCQ1 1025 aa9.81□□□□□ -0.84
ALMS1-208ENST00000620466 KCNH5Q8NCM2 988 aa9.81□□□□□ -0.84
ALMS1-208ENST00000620466 PDE1AP54750 535 aa9.81□□□□□ -0.84
ALMS1-208ENST00000620466 KRT18P05783 430 aaKnown RBP9.81□□□□□ -0.84
ALMS1-208ENST00000620466 CLCN1P35523 988 aa9.81□□□□□ -0.84
ALMS1-208ENST00000620466 PPP1R42Q7Z4L9 355 aa9.81□□□□□ -0.84
ALMS1-208ENST00000620466 GNL3LQ9NVN8 582 aaKnown RBP9.81□□□□□ -0.84
ALMS1-208ENST00000620466 CEP57L1Q8IYX8 460 aa9.81□□□□□ -0.84
ALMS1-208ENST00000620466 JMYQ8N9B5 988 aa9.81□□□□□ -0.84
ALMS1-208ENST00000620466 ESYT1Q9BSJ8 1104 aa9.81□□□□□ -0.84
ALMS1-208ENST00000620466 AMOTL2Q9Y2J4 779 aa9.81□□□□□ -0.84
ALMS1-208ENST00000620466 MAGI2Q86UL8 1455 aa9.81□□□□□ -0.84
ALMS1-208ENST00000620466 OFD1O75665 1012 aa9.8□□□□□ -0.84
ALMS1-208ENST00000620466 CCDC57Q2TAC2 916 aa9.8□□□□□ -0.84
ALMS1-208ENST00000620466 MAP3K2Q9Y2U5 619 aa9.8□□□□□ -0.84
ALMS1-208ENST00000620466 SYNMO15061 1565 aa9.8□□□□□ -0.84
ALMS1-208ENST00000620466 CCDC69A6NI79 296 aa9.8□□□□□ -0.84
ALMS1-208ENST00000620466 RBM5P52756 815 aaKnown RBP eCLIP9.8□□□□□ -0.84
ALMS1-208ENST00000620466 EVI5LQ96CN4 794 aa9.8□□□□□ -0.84
ALMS1-208ENST00000620466 PHACTR3Q96KR7 559 aa9.8□□□□□ -0.84
ALMS1-208ENST00000620466 ADCY5O95622 1261 aa9.8□□□□□ -0.84
ALMS1-208ENST00000620466 CEP85Q6P2H3 762 aa9.8□□□□□ -0.84
ALMS1-208ENST00000620466 ACBD3Q9H3P7 528 aa9.8□□□□□ -0.84
ALMS1-208ENST00000620466 SAMD9LQ8IVG5 1584 aa9.8□□□□□ -0.84
ALMS1-208ENST00000620466 EIF4A2Q14240 407 aaKnown RBP9.8□□□□□ -0.84
ALMS1-208ENST00000620466 PLEKHM2Q8IWE5 1019 aa9.8□□□□□ -0.84
ALMS1-208ENST00000620466 LARP1Q6PKG0 1096 aaKnown RBP9.79□□□□□ -0.84
ALMS1-208ENST00000620466 MBD5Q9P267 1494 aa9.79□□□□□ -0.84
ALMS1-208ENST00000620466 POGZQ7Z3K3 1410 aa9.79□□□□□ -0.84
ALMS1-208ENST00000620466 SYCP1Q15431 976 aa9.79□□□□□ -0.84
ALMS1-208ENST00000620466 DCTPP1Q9H773 170 aa9.79□□□□□ -0.84
ALMS1-208ENST00000620466 ZBTB7BO15156 539 aaPredicted RBP9.79□□□□□ -0.84
ALMS1-208ENST00000620466 CBFA2T2O43439 604 aa9.79□□□□□ -0.84
ALMS1-208ENST00000620466 RDXP35241 583 aaKnown RBP9.79□□□□□ -0.84
ALMS1-208ENST00000620466 FILIP1Q7Z7B0 1213 aa9.79□□□□□ -0.84
ALMS1-208ENST00000620466 SCAND2PQ9GZW5 306 aaPredicted RBP9.79□□□□□ -0.84
ALMS1-208ENST00000620466 CTNNA3Q9UI47 895 aa9.79□□□□□ -0.84
ALMS1-208ENST00000620466 RIMS2Q9UQ26 1411 aa9.79□□□□□ -0.84
ALMS1-208ENST00000620466 MSH6P52701 1360 aa9.79□□□□□ -0.84
ALMS1-208ENST00000620466 DHX8Q14562 1220 aaKnown RBP9.79□□□□□ -0.84
ALMS1-208ENST00000620466 ZSCAN25Q6NSZ9 544 aa9.79□□□□□ -0.84
ALMS1-208ENST00000620466 TXLNAP40222 546 aa9.79□□□□□ -0.84
ALMS1-208ENST00000620466 BRPF1P55201 1214 aaPredicted RBP9.79□□□□□ -0.84
ALMS1-208ENST00000620466 SKIDA1Q1XH10 827 aa9.79□□□□□ -0.84
ALMS1-208ENST00000620466 FILIP1LQ4L180 1135 aa9.79□□□□□ -0.84
ALMS1-208ENST00000620466 AMOTQ4VCS5 1084 aa9.79□□□□□ -0.84
ALMS1-208ENST00000620466 ANKLE2Q86XL3 938 aa9.79□□□□□ -0.84
ALMS1-208ENST00000620466 CKAP2LQ8IYA6 745 aa9.79□□□□□ -0.84
ALMS1-208ENST00000620466 MYO6Q9UM54 1294 aa9.79□□□□□ -0.84
ALMS1-208ENST00000620466 TRIM35Q9UPQ4 493 aa9.79□□□□□ -0.84
ALMS1-208ENST00000620466 CALRP27797 417 aaKnown RBP9.78□□□□□ -0.84
ALMS1-208ENST00000620466 PIP4K2BP78356 416 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 TOM1L2Q6ZVM7 507 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 ECHDC1Q9NTX5 307 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 MYO5CQ9NQX4 1742 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 PDCL2Q8N4E4 241 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 MCM5P33992 734 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 IMMTQ16891 758 aaKnown RBP9.78□□□□□ -0.84
ALMS1-208ENST00000620466 DBF4Q9UBU7 674 aaPredicted RBP9.78□□□□□ -0.84
ALMS1-208ENST00000620466 DACH1Q9UI36 760 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 CNPY2Q9Y2B0 182 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 PLXNC1O60486 1568 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 ZSCAN22P10073 491 aaPredicted RBP9.78□□□□□ -0.84
ALMS1-208ENST00000620466 ZC3H6P61129 1189 aaKnown RBP9.78□□□□□ -0.84
ALMS1-208ENST00000620466 USP48Q86UV5 1035 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 SMARCE1Q969G3 411 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 HYPKQ9NX55 129 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 UBE2HP62256 183 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 KRT24Q2M2I5 525 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 UVSSAQ2YD98 709 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 RHPN1Q8TCX5 695 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 CDKL5O76039 1030 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 RBM25P49756 843 aaKnown RBP9.78□□□□□ -0.84
ALMS1-208ENST00000620466 ATP8B2P98198 1209 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 CLIP2Q9UDT6 1046 aa9.78□□□□□ -0.84
ALMS1-208ENST00000620466 PAF1Q8N7H5 531 aa9.77□□□□□ -0.84
ALMS1-208ENST00000620466 USP26Q9BXU7 913 aa9.77□□□□□ -0.84
ALMS1-208ENST00000620466 NPATQ14207 1427 aa9.77□□□□□ -0.85
ALMS1-208ENST00000620466 SMTNL1A8MU46 457 aa9.77□□□□□ -0.85
ALMS1-208ENST00000620466 CEP126Q9P2H0 1117 aa9.77□□□□□ -0.85
ALMS1-208ENST00000620466 YTHDC2Q9H6S0 1430 aaKnown RBP9.77□□□□□ -0.85
ALMS1-208ENST00000620466 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.77□□□□□ -0.85
ALMS1-208ENST00000620466 TRIM22Q8IYM9 498 aa9.77□□□□□ -0.85
ALMS1-208ENST00000620466 ZGPATQ8N5A5 531 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms