RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 HEG1Q9ULI3 1381 aa29.08■■■□□ 2.25
TRAF4-217ENST00000618771 NEFMP07197 916 aa29.07■■■□□ 2.24
TRAF4-217ENST00000618771 SRP68Q9UHB9 627 aaKnown RBP29.07■■■□□ 2.24
TRAF4-217ENST00000618771 MCM10Q7L590 875 aa29.06■■■□□ 2.24
TRAF4-217ENST00000618771 ZBTB1Q9Y2K1 713 aa29.06■■■□□ 2.24
TRAF4-217ENST00000618771 BTBD11A6QL63 1104 aa29.05■■■□□ 2.24
TRAF4-217ENST00000618771 COL15A1P39059 1388 aa29.04■■■□□ 2.24
TRAF4-217ENST00000618771 KIAA1551Q9HCM1 1747 aa29.04■■■□□ 2.24
TRAF4-217ENST00000618771 HTATSF1O43719 755 aaKnown RBP29.04■■■□□ 2.24
TRAF4-217ENST00000618771 STARD3NLO95772 234 aa29.04■■■□□ 2.24
TRAF4-217ENST00000618771 PXDNLA1KZ92 1463 aa29.04■■■□□ 2.24
TRAF4-217ENST00000618771 N4BP2Q86UW6 1770 aaPredicted RBP29.03■■■□□ 2.24
TRAF4-217ENST00000618771 HSPA6P17066 643 aa29.03■■■□□ 2.24
TRAF4-217ENST00000618771 FMNL2Q96PY5 1086 aa29.03■■■□□ 2.24
TRAF4-217ENST00000618771 PARP3Q9Y6F1 533 aa29.03■■■□□ 2.24
TRAF4-217ENST00000618771 C10orf71Q711Q0 1435 aa29.03■■■□□ 2.24
TRAF4-217ENST00000618771 ZPR1O75312 459 aa29.02■■■□□ 2.24
TRAF4-217ENST00000618771 DCTN1Q14203 1278 aa29.02■■■□□ 2.24
TRAF4-217ENST00000618771 FKBP8Q14318 412 aa29.02■■■□□ 2.24
TRAF4-217ENST00000618771 A0A0G2JLW4 131 aa29.01■■■□□ 2.23
TRAF4-217ENST00000618771 KCNQ3O43525 872 aa29.01■■■□□ 2.23
TRAF4-217ENST00000618771 TGFB2P61812 414 aa29.01■■■□□ 2.23
TRAF4-217ENST00000618771 PLEKHF1Q96S99 279 aa29.01■■■□□ 2.23
TRAF4-217ENST00000618771 TEX13AQ9BXU3 409 aaPredicted RBP29.01■■■□□ 2.23
TRAF4-217ENST00000618771 BCS1LQ9Y276 419 aa29.01■■■□□ 2.23
TRAF4-217ENST00000618771 MYBBP1AQ9BQG0 1328 aaKnown RBP29■■■□□ 2.23
TRAF4-217ENST00000618771 CANXP27824 592 aaKnown RBP29■■■□□ 2.23
TRAF4-217ENST00000618771 PNNQ9H307 717 aaKnown RBP29■■■□□ 2.23
TRAF4-217ENST00000618771 USPL1Q5W0Q7 1092 aa28.99■■■□□ 2.23
TRAF4-217ENST00000618771 NARFQ9UHQ1 456 aa28.99■■■□□ 2.23
TRAF4-217ENST00000618771 MAPK8IP3Q9UPT6 1336 aa28.98■■■□□ 2.23
TRAF4-217ENST00000618771 KIF3CO14782 793 aa28.98■■■□□ 2.23
TRAF4-217ENST00000618771 ZEB1P37275 1124 aaPredicted RBP28.97■■■□□ 2.23
TRAF4-217ENST00000618771 AFDNP55196 1824 aaKnown RBP28.97■■■□□ 2.23
TRAF4-217ENST00000618771 BRCA1P38398 1863 aaKnown RBP28.96■■■□□ 2.23
TRAF4-217ENST00000618771 DDR1Q08345 913 aa28.96■■■□□ 2.23
TRAF4-217ENST00000618771 NFE2L2Q16236 605 aa28.96■■■□□ 2.23
TRAF4-217ENST00000618771 IFFO2Q5TF58 517 aa28.96■■■□□ 2.23
TRAF4-217ENST00000618771 DPEP1P16444 411 aa28.95■■■□□ 2.22
TRAF4-217ENST00000618771 EIF5P55010 431 aaKnown RBP28.95■■■□□ 2.22
TRAF4-217ENST00000618771 SCN7AQ01118 1682 aa28.95■■■□□ 2.22
TRAF4-217ENST00000618771 KDM3BQ7LBC6 1761 aa28.95■■■□□ 2.22
TRAF4-217ENST00000618771 ARHGAP27Q6ZUM4 889 aa28.94■■■□□ 2.22
TRAF4-217ENST00000618771 TAF7Q15545 349 aaPredicted RBP28.93■■■□□ 2.22
TRAF4-217ENST00000618771 A0A087WZG4 1122 aa28.92■■■□□ 2.22
TRAF4-217ENST00000618771 TM4SF1P30408 202 aa28.92■■■□□ 2.22
TRAF4-217ENST00000618771 LAMB4A4D0S4 1761 aa28.91■■■□□ 2.22
TRAF4-217ENST00000618771 POLRMTO00411 1230 aaKnown RBP28.91■■■□□ 2.22
TRAF4-217ENST00000618771 ZNF330Q9Y3S2 320 aaPredicted RBP28.91■■■□□ 2.22
TRAF4-217ENST00000618771 NRXN2Q9P2S2 1712 aa28.91■■■□□ 2.22
TRAF4-217ENST00000618771 A1BGP04217 495 aa28.9■■■□□ 2.22
TRAF4-217ENST00000618771 SNRPA1P09661 255 aaKnown RBP28.9■■■□□ 2.22
TRAF4-217ENST00000618771 IL6STP40189 918 aaPredicted RBP28.9■■■□□ 2.22
TRAF4-217ENST00000618771 BCL2L12Q9HB09 334 aa28.9■■■□□ 2.22
TRAF4-217ENST00000618771 NFIXQ14938 502 aa28.89■■■□□ 2.22
TRAF4-217ENST00000618771 BCORQ6W2J9 1755 aa28.88■■■□□ 2.21
TRAF4-217ENST00000618771 PRAMEF22A3QJZ6 481 aa28.88■■■□□ 2.21
TRAF4-217ENST00000618771 THUMPD2Q9BTF0 503 aaKnown RBP28.88■■■□□ 2.21
TRAF4-217ENST00000618771 USP16Q9Y5T5 823 aa28.88■■■□□ 2.21
TRAF4-217ENST00000618771 NPM2Q86SE8 214 aaKnown RBP28.87■■■□□ 2.21
TRAF4-217ENST00000618771 PRKRIP1Q9H875 184 aaPredicted RBP28.87■■■□□ 2.21
TRAF4-217ENST00000618771 MIS18AQ9NYP9 233 aa28.87■■■□□ 2.21
TRAF4-217ENST00000618771 KCNA3P22001 575 aa28.86■■■□□ 2.21
TRAF4-217ENST00000618771 PNISRQ8TF01 805 aaKnown RBP28.86■■■□□ 2.21
TRAF4-217ENST00000618771 ARFGEF1Q9Y6D6 1849 aa28.85■■■□□ 2.21
TRAF4-217ENST00000618771 TBC1D2BQ9UPU7 963 aa28.85■■■□□ 2.21
TRAF4-217ENST00000618771 WDR43Q15061 677 aaKnown RBP eCLIP28.83■■■□□ 2.21
TRAF4-217ENST00000618771 PIM2Q9P1W9 311 aa28.83■■■□□ 2.21
TRAF4-217ENST00000618771 TOMM70O94826 608 aa28.82■■■□□ 2.2
TRAF4-217ENST00000618771 PIP4K2AP48426 406 aaPredicted RBP28.82■■■□□ 2.2
TRAF4-217ENST00000618771 RIPK4P57078 832 aa28.82■■■□□ 2.2
TRAF4-217ENST00000618771 NMRK2Q9NPI5 230 aa28.82■■■□□ 2.2
TRAF4-217ENST00000618771 SERPINB2P05120 415 aa28.81■■■□□ 2.2
TRAF4-217ENST00000618771 C9orf131Q5VYM1 1079 aa28.81■■■□□ 2.2
TRAF4-217ENST00000618771 BICDL1Q6ZP65 573 aa28.81■■■□□ 2.2
TRAF4-217ENST00000618771 DLEC1Q9Y238 1755 aa28.8■■■□□ 2.2
TRAF4-217ENST00000618771 TMPOP42166 694 aaKnown RBP28.8■■■□□ 2.2
TRAF4-217ENST00000618771 APLP1P51693 650 aa28.8■■■□□ 2.2
TRAF4-217ENST00000618771 CCDC146Q8IYE0 955 aa28.8■■■□□ 2.2
TRAF4-217ENST00000618771 CAMTA2O94983 1202 aa28.79■■■□□ 2.2
TRAF4-217ENST00000618771 DALRD3Q5D0E6 543 aaKnown RBP28.79■■■□□ 2.2
TRAF4-217ENST00000618771 TBC1D9BQ66K14 1250 aa28.79■■■□□ 2.2
TRAF4-217ENST00000618771 DZIP3Q86Y13 1208 aaKnown RBP28.79■■■□□ 2.2
TRAF4-217ENST00000618771 LMOD3Q0VAK6 560 aa28.78■■■□□ 2.2
TRAF4-217ENST00000618771 ANKRD31Q8N7Z5 1873 aa28.77■■■□□ 2.2
TRAF4-217ENST00000618771 CHRNA5P30532 468 aa28.77■■■□□ 2.2
TRAF4-217ENST00000618771 EIF4A1P60842 406 aaKnown RBP28.77■■■□□ 2.2
TRAF4-217ENST00000618771 NBPF26B4DH59 902 aa28.76■■■□□ 2.19
TRAF4-217ENST00000618771 NBPF10Q6P3W6 841 aaKnown RBP28.76■■■□□ 2.19
TRAF4-217ENST00000618771 NBPF15Q8N660 670 aa28.76■■■□□ 2.19
TRAF4-217ENST00000618771 CARMIL3Q8ND23 1372 aa28.75■■■□□ 2.19
TRAF4-217ENST00000618771 RUNDC1Q96C34 613 aa28.75■■■□□ 2.19
TRAF4-217ENST00000618771 ADAMTS8Q9UP79 889 aa28.75■■■□□ 2.19
TRAF4-217ENST00000618771 RRP7AQ9Y3A4 280 aaKnown RBP28.75■■■□□ 2.19
TRAF4-217ENST00000618771 NEUROD2Q15784 382 aa28.73■■■□□ 2.19
TRAF4-217ENST00000618771 TSPYL4Q9UJ04 414 aa28.73■■■□□ 2.19
TRAF4-217ENST00000618771 C16orf71Q8IYS4 520 aaPredicted RBP28.72■■■□□ 2.19
TRAF4-217ENST00000618771 RNF181Q9P0P0 153 aa28.72■■■□□ 2.19
TRAF4-217ENST00000618771 SETDB2Q96T68 719 aa28.71■■■□□ 2.19
TRAF4-217ENST00000618771 DNAJC5GQ8N7S2 189 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms