RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 GLI3P10071 1580 aa31.57■■■□□ 2.64
VEGFC-202ENST00000618562 DISP2A7MBM2 1401 aa31.56■■■□□ 2.64
VEGFC-202ENST00000618562 ERVV-2B6SEH9 535 aa31.56■■■□□ 2.64
VEGFC-202ENST00000618562 CHD1LQ86WJ1 897 aa31.55■■■□□ 2.64
VEGFC-202ENST00000618562 ADCY9O60503 1353 aa31.55■■■□□ 2.64
VEGFC-202ENST00000618562 TOGARAM1Q9Y4F4 1720 aa31.54■■■□□ 2.64
VEGFC-202ENST00000618562 PI4KAP2A4QPH2 592 aa31.54■■■□□ 2.64
VEGFC-202ENST00000618562 PI4KAP1Q8N8J0 262 aa31.54■■■□□ 2.64
VEGFC-202ENST00000618562 ADAMTS2O95450 1211 aa31.53■■■□□ 2.64
VEGFC-202ENST00000618562 PDIA6Q15084 440 aa31.53■■■□□ 2.64
VEGFC-202ENST00000618562 DDX21Q9NR30 783 aaKnown RBP eCLIP31.53■■■□□ 2.64
VEGFC-202ENST00000618562 DNAAF4Q8WXU2 420 aa31.53■■■□□ 2.64
VEGFC-202ENST00000618562 FMNL2Q96PY5 1086 aa31.53■■■□□ 2.64
VEGFC-202ENST00000618562 LNPKQ9C0E8 428 aa31.53■■■□□ 2.64
VEGFC-202ENST00000618562 NRAPQ86VF7 1730 aa31.52■■■□□ 2.64
VEGFC-202ENST00000618562 UBR2Q8IWV8 1755 aa31.52■■■□□ 2.64
VEGFC-202ENST00000618562 HYPKQ9NX55 129 aa31.52■■■□□ 2.64
VEGFC-202ENST00000618562 PAPPAQ13219 1627 aa31.52■■■□□ 2.64
VEGFC-202ENST00000618562 WNK3Q9BYP7 1800 aa31.52■■■□□ 2.64
VEGFC-202ENST00000618562 GNAI3P08754 354 aa31.52■■■□□ 2.64
VEGFC-202ENST00000618562 SNRPA1P09661 255 aaKnown RBP31.52■■■□□ 2.64
VEGFC-202ENST00000618562 DCTPP1Q9H773 170 aa31.52■■■□□ 2.64
VEGFC-202ENST00000618562 GNAI2P04899 355 aa31.51■■■□□ 2.63
VEGFC-202ENST00000618562 ANKRD45Q5TZF3 282 aa31.51■■■□□ 2.63
VEGFC-202ENST00000618562 UBAP1LF5GYI3 381 aa31.5■■■□□ 2.63
VEGFC-202ENST00000618562 USP44Q9H0E7 712 aa31.5■■■□□ 2.63
VEGFC-202ENST00000618562 SRCIN1Q9C0H9 1055 aa31.5■■■□□ 2.63
VEGFC-202ENST00000618562 LAMB4A4D0S4 1761 aa31.49■■■□□ 2.63
VEGFC-202ENST00000618562 BEND3Q5T5X7 828 aa31.49■■■□□ 2.63
VEGFC-202ENST00000618562 C22orf23Q9BZE7 217 aa31.49■■■□□ 2.63
VEGFC-202ENST00000618562 USP16Q9Y5T5 823 aa31.48■■■□□ 2.63
VEGFC-202ENST00000618562 NUTM2BA6NNL0 878 aaPredicted RBP31.46■■■□□ 2.63
VEGFC-202ENST00000618562 NUTM2EB1AL46 878 aaPredicted RBP31.46■■■□□ 2.63
VEGFC-202ENST00000618562 KSR2Q6VAB6 950 aa31.46■■■□□ 2.63
VEGFC-202ENST00000618562 NUTM2AQ8IVF1 878 aaPredicted RBP31.46■■■□□ 2.63
VEGFC-202ENST00000618562 KCPQ6ZWJ8 1503 aa31.46■■■□□ 2.63
VEGFC-202ENST00000618562 BMP2KLQ5H9B9 411 aa31.45■■■□□ 2.63
VEGFC-202ENST00000618562 TBC1D2Q9BYX2 928 aa31.45■■■□□ 2.63
VEGFC-202ENST00000618562 MAP3K2Q9Y2U5 619 aa31.45■■■□□ 2.63
VEGFC-202ENST00000618562 MFAP1P55081 439 aaKnown RBP31.45■■■□□ 2.62
VEGFC-202ENST00000618562 TNS2Q63HR2 1409 aa31.43■■■□□ 2.62
VEGFC-202ENST00000618562 HMMRO75330 724 aa31.42■■■□□ 2.62
VEGFC-202ENST00000618562 FRAT2O75474 233 aaPredicted RBP31.42■■■□□ 2.62
VEGFC-202ENST00000618562 UBTFL1P0CB47 393 aaPredicted RBP31.42■■■□□ 2.62
VEGFC-202ENST00000618562 LRRFIP2Q9Y608 721 aaKnown RBP31.42■■■□□ 2.62
VEGFC-202ENST00000618562 MYL6BP14649 208 aa31.42■■■□□ 2.62
VEGFC-202ENST00000618562 GSE1Q14687 1217 aa31.42■■■□□ 2.62
VEGFC-202ENST00000618562 LRP10Q7Z4F1 713 aa31.42■■■□□ 2.62
VEGFC-202ENST00000618562 ANTXR1Q9H6X2 564 aa31.42■■■□□ 2.62
VEGFC-202ENST00000618562 NWD2Q9ULI1 1742 aa31.41■■■□□ 2.62
VEGFC-202ENST00000618562 ITGB4P16144 1822 aa31.41■■■□□ 2.62
VEGFC-202ENST00000618562 AIMP1Q12904 312 aaKnown RBP31.4■■■□□ 2.62
VEGFC-202ENST00000618562 SPATA31A1Q5TZJ5 1347 aa31.4■■■□□ 2.62
VEGFC-202ENST00000618562 DDX58O95786 925 aaKnown RBP31.39■■■□□ 2.62
VEGFC-202ENST00000618562 ATP8B2P98198 1209 aa31.39■■■□□ 2.62
VEGFC-202ENST00000618562 TMOD3Q9NYL9 352 aa31.39■■■□□ 2.62
VEGFC-202ENST00000618562 SLIT2O94813 1529 aa31.38■■■□□ 2.61
VEGFC-202ENST00000618562 NBPF7P0C2Y1 421 aaPredicted RBP31.38■■■□□ 2.61
VEGFC-202ENST00000618562 PNMA6EA0A0J9YXQ4 647 aa31.37■■■□□ 2.61
VEGFC-202ENST00000618562 PIP4K2AP48426 406 aaPredicted RBP31.37■■■□□ 2.61
VEGFC-202ENST00000618562 XAGE3Q8WTP9 111 aa31.37■■■□□ 2.61
VEGFC-202ENST00000618562 ALDH1L1O75891 902 aa31.37■■■□□ 2.61
VEGFC-202ENST00000618562 EXOC5O00471 708 aa31.36■■■□□ 2.61
VEGFC-202ENST00000618562 COPS6Q7L5N1 327 aa31.36■■■□□ 2.61
VEGFC-202ENST00000618562 SLKQ9H2G2 1235 aaPredicted RBP31.36■■■□□ 2.61
VEGFC-202ENST00000618562 LRP6O75581 1613 aa31.36■■■□□ 2.61
VEGFC-202ENST00000618562 RBM25P49756 843 aaKnown RBP31.36■■■□□ 2.61
VEGFC-202ENST00000618562 PTCD1O75127 700 aaKnown RBP31.35■■■□□ 2.61
VEGFC-202ENST00000618562 THRAP3Q9Y2W1 955 aaKnown RBP31.34■■■□□ 2.61
VEGFC-202ENST00000618562 CWF19L2Q2TBE0 894 aaKnown RBP31.34■■■□□ 2.61
VEGFC-202ENST00000618562 PIGBQ92521 554 aa31.34■■■□□ 2.61
VEGFC-202ENST00000618562 LINS1Q8NG48 757 aa31.33■■■□□ 2.61
VEGFC-202ENST00000618562 RIC3Q7Z5B4 369 aa31.33■■■□□ 2.61
VEGFC-202ENST00000618562 CDCA7Q9BWT1 371 aaPredicted RBP31.33■■■□□ 2.61
VEGFC-202ENST00000618562 ERBB4Q15303 1308 aa31.32■■■□□ 2.6
VEGFC-202ENST00000618562 SPATA31A5Q5VU36 1347 aa31.32■■■□□ 2.6
VEGFC-202ENST00000618562 SPATA31A7Q8IWB4 1347 aa31.32■■■□□ 2.6
VEGFC-202ENST00000618562 JCADQ9P266 1359 aa31.31■■■□□ 2.6
VEGFC-202ENST00000618562 NBPF26B4DH59 902 aa31.31■■■□□ 2.6
VEGFC-202ENST00000618562 NBPF14Q5TI25 921 aa31.31■■■□□ 2.6
VEGFC-202ENST00000618562 NBPF10Q6P3W6 841 aaKnown RBP31.31■■■□□ 2.6
VEGFC-202ENST00000618562 NBPF15Q8N660 670 aa31.31■■■□□ 2.6
VEGFC-202ENST00000618562 APBB1O00213 710 aa31.3■■■□□ 2.6
VEGFC-202ENST00000618562 ASAP1Q9ULH1 1129 aa31.3■■■□□ 2.6
VEGFC-202ENST00000618562 SMARCA5O60264 1052 aaPredicted RBP31.29■■■□□ 2.6
VEGFC-202ENST00000618562 ARFGEF2Q9Y6D5 1785 aa31.29■■■□□ 2.6
VEGFC-202ENST00000618562 ANKRD13DQ6ZTN6 518 aa31.29■■■□□ 2.6
VEGFC-202ENST00000618562 PLEKHM2Q8IWE5 1019 aa31.29■■■□□ 2.6
VEGFC-202ENST00000618562 C16orf71Q8IYS4 520 aaPredicted RBP31.29■■■□□ 2.6
VEGFC-202ENST00000618562 SSH3Q8TE77 659 aa31.29■■■□□ 2.6
VEGFC-202ENST00000618562 EXOC6BQ9Y2D4 811 aa31.29■■■□□ 2.6
VEGFC-202ENST00000618562 BCL9O00512 1426 aa31.28■■■□□ 2.6
VEGFC-202ENST00000618562 IGKV5-2P06315 115 aa31.28■■■□□ 2.6
VEGFC-202ENST00000618562 KAT6BQ8WYB5 2073 aa31.28■■■□□ 2.6
VEGFC-202ENST00000618562 C9orf78Q9NZ63 289 aaPredicted RBP31.28■■■□□ 2.6
VEGFC-202ENST00000618562 PPP1R42Q7Z4L9 355 aa31.27■■■□□ 2.6
VEGFC-202ENST00000618562 METTL22Q9BUU2 404 aaPredicted RBP31.27■■■□□ 2.6
VEGFC-202ENST00000618562 ATG3Q9NT62 314 aa31.27■■■□□ 2.6
VEGFC-202ENST00000618562 DOT1LQ8TEK3 1739 aa31.26■■■□□ 2.6
VEGFC-202ENST00000618562 POLA2Q14181 598 aa31.26■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms