RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 CLUAP1Q96AJ1 413 aa5.98□□□□□ -1.45
SYCP1-210ENST00000618516 PNNQ9H307 717 aaKnown RBP5.98□□□□□ -1.45
SYCP1-210ENST00000618516 NWD2Q9ULI1 1742 aa5.98□□□□□ -1.45
SYCP1-210ENST00000618516 NPC1L1Q9UHC9 1359 aa5.97□□□□□ -1.45
SYCP1-210ENST00000618516 PLSCR1O15162 318 aa5.97□□□□□ -1.45
SYCP1-210ENST00000618516 EXOSC9Q06265 439 aaKnown RBP5.97□□□□□ -1.45
SYCP1-210ENST00000618516 TTLL7Q6ZT98 887 aa5.97□□□□□ -1.45
SYCP1-210ENST00000618516 NUTM1Q86Y26 1132 aa5.97□□□□□ -1.45
SYCP1-210ENST00000618516 WWC1Q8IX03 1113 aa5.97□□□□□ -1.45
SYCP1-210ENST00000618516 SPON1Q9HCB6 807 aa5.97□□□□□ -1.45
SYCP1-210ENST00000618516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.97□□□□□ -1.45
SYCP1-210ENST00000618516 CHPF2Q9P2E5 772 aa5.97□□□□□ -1.45
SYCP1-210ENST00000618516 LRRC37A3O60309 1634 aa5.97□□□□□ -1.45
SYCP1-210ENST00000618516 KDRP35968 1356 aa5.97□□□□□ -1.45
SYCP1-210ENST00000618516 KIF24Q5T7B8 1368 aa5.97□□□□□ -1.45
SYCP1-210ENST00000618516 DUSP27Q5VZP5 1158 aa5.97□□□□□ -1.45
SYCP1-210ENST00000618516 FHDC1Q9C0D6 1143 aaPredicted RBP5.97□□□□□ -1.45
SYCP1-210ENST00000618516 BCL9O00512 1426 aa5.97□□□□□ -1.45
SYCP1-210ENST00000618516 NCBP3Q53F19 620 aaKnown RBP5.96□□□□□ -1.45
SYCP1-210ENST00000618516 PHAXQ9H814 394 aaKnown RBP5.96□□□□□ -1.45
SYCP1-210ENST00000618516 CCDC87Q9NVE4 849 aa5.96□□□□□ -1.45
SYCP1-210ENST00000618516 F6X3S4 739 aa5.96□□□□□ -1.46
SYCP1-210ENST00000618516 SNRPA1P09661 255 aaKnown RBP5.96□□□□□ -1.46
SYCP1-210ENST00000618516 GPR162Q16538 588 aa5.96□□□□□ -1.46
SYCP1-210ENST00000618516 DZIP3Q86Y13 1208 aaKnown RBP5.96□□□□□ -1.46
SYCP1-210ENST00000618516 SYNE4Q8N205 404 aa5.96□□□□□ -1.46
SYCP1-210ENST00000618516 NLGN2Q8NFZ4 835 aa5.96□□□□□ -1.46
SYCP1-210ENST00000618516 PNPLA7Q6ZV29 1317 aa5.96□□□□□ -1.46
SYCP1-210ENST00000618516 A0A0G2JLW4 131 aa5.96□□□□□ -1.46
SYCP1-210ENST00000618516 POLD1P28340 1107 aa5.96□□□□□ -1.46
SYCP1-210ENST00000618516 COPS6Q7L5N1 327 aa5.96□□□□□ -1.46
SYCP1-210ENST00000618516 COL3A1P02461 1466 aaPredicted RBP5.95□□□□□ -1.46
SYCP1-210ENST00000618516 CHRNA5P30532 468 aa5.95□□□□□ -1.46
SYCP1-210ENST00000618516 LMOD3Q0VAK6 560 aa5.95□□□□□ -1.46
SYCP1-210ENST00000618516 NKX1-1Q15270 411 aaPredicted RBP5.95□□□□□ -1.46
SYCP1-210ENST00000618516 HLFQ16534 295 aa5.95□□□□□ -1.46
SYCP1-210ENST00000618516 ZNF622Q969S3 477 aaKnown RBP eCLIP5.95□□□□□ -1.46
SYCP1-210ENST00000618516 NBPF26B4DH59 902 aa5.95□□□□□ -1.46
SYCP1-210ENST00000618516 SLC4A2P04920 1241 aa5.95□□□□□ -1.46
SYCP1-210ENST00000618516 CYP19A1P11511 503 aaPredicted RBP5.95□□□□□ -1.46
SYCP1-210ENST00000618516 EIF4A1P60842 406 aaKnown RBP5.95□□□□□ -1.46
SYCP1-210ENST00000618516 IRX6P78412 446 aaPredicted RBP5.95□□□□□ -1.46
SYCP1-210ENST00000618516 FKBP5Q13451 457 aaPredicted RBP5.95□□□□□ -1.46
SYCP1-210ENST00000618516 NBPF10Q6P3W6 841 aaKnown RBP5.95□□□□□ -1.46
SYCP1-210ENST00000618516 SLC51AQ86UW1 340 aa5.95□□□□□ -1.46
SYCP1-210ENST00000618516 NBPF15Q8N660 670 aa5.95□□□□□ -1.46
SYCP1-210ENST00000618516 SP7Q8TDD2 431 aaPredicted RBP5.95□□□□□ -1.46
SYCP1-210ENST00000618516 XAGE3Q8WTP9 111 aa5.95□□□□□ -1.46
SYCP1-210ENST00000618516 NIP7Q9Y221 180 aaKnown RBP eCLIP5.95□□□□□ -1.46
SYCP1-210ENST00000618516 BCS1LQ9Y276 419 aa5.95□□□□□ -1.46
SYCP1-210ENST00000618516 CHMP3Q9Y3E7 222 aa5.95□□□□□ -1.46
SYCP1-210ENST00000618516 GIGYF1O75420 1035 aaPredicted RBP5.94□□□□□ -1.46
SYCP1-210ENST00000618516 TWISTNBQ3B726 338 aaPredicted RBP5.94□□□□□ -1.46
SYCP1-210ENST00000618516 RIC3Q7Z5B4 369 aa5.94□□□□□ -1.46
SYCP1-210ENST00000618516 DOT1LQ8TEK3 1739 aa5.94□□□□□ -1.46
SYCP1-210ENST00000618516 SLC27A3Q5K4L6 730 aa5.94□□□□□ -1.46
SYCP1-210ENST00000618516 INTS5Q6P9B9 1019 aaKnown RBP5.94□□□□□ -1.46
SYCP1-210ENST00000618516 G2E3Q7L622 706 aa5.94□□□□□ -1.46
SYCP1-210ENST00000618516 PLIN1O60240 522 aa5.94□□□□□ -1.46
SYCP1-210ENST00000618516 GOLGA2Q08379 1002 aa5.94□□□□□ -1.46
SYCP1-210ENST00000618516 TBC1D9BQ66K14 1250 aa5.94□□□□□ -1.46
SYCP1-210ENST00000618516 STK31Q9BXU1 1019 aa5.94□□□□□ -1.46
SYCP1-210ENST00000618516 FAM208AQ9UK61 1670 aaKnown RBP5.93□□□□□ -1.46
SYCP1-210ENST00000618516 THSD7AQ9UPZ6 1657 aa5.93□□□□□ -1.46
SYCP1-210ENST00000618516 HCLS1P14317 486 aaPredicted RBP5.93□□□□□ -1.46
SYCP1-210ENST00000618516 OLFM4Q6UX06 510 aa5.93□□□□□ -1.46
SYCP1-210ENST00000618516 NBPF5PQ86XG9 351 aaPredicted RBP5.93□□□□□ -1.46
SYCP1-210ENST00000618516 FANCIQ9NVI1 1328 aa5.93□□□□□ -1.46
SYCP1-210ENST00000618516 CENPFP49454 3210 aa5.93□□□□□ -1.46
SYCP1-210ENST00000618516 HEG1Q9ULI3 1381 aa5.93□□□□□ -1.46
SYCP1-210ENST00000618516 GNAI1P63096 354 aa5.93□□□□□ -1.46
SYCP1-210ENST00000618516 KIF6Q6ZMV9 814 aa5.93□□□□□ -1.46
SYCP1-210ENST00000618516 AKT1S1Q96B36 256 aa5.93□□□□□ -1.46
SYCP1-210ENST00000618516 CFAP44Q96MT7 982 aa5.93□□□□□ -1.46
SYCP1-210ENST00000618516 PARP3Q9Y6F1 533 aa5.93□□□□□ -1.46
SYCP1-210ENST00000618516 GYS1P13807 737 aa5.92□□□□□ -1.46
SYCP1-210ENST00000618516 NFIXQ14938 502 aa5.92□□□□□ -1.46
SYCP1-210ENST00000618516 CWF19L2Q2TBE0 894 aaKnown RBP5.92□□□□□ -1.46
SYCP1-210ENST00000618516 FAM89AQ96GI7 184 aa5.92□□□□□ -1.46
SYCP1-210ENST00000618516 SETDB2Q96T68 719 aa5.92□□□□□ -1.46
SYCP1-210ENST00000618516 MTFR1LQ9H019 292 aa5.92□□□□□ -1.46
SYCP1-210ENST00000618516 SMC4Q9NTJ3 1288 aa5.92□□□□□ -1.46
SYCP1-210ENST00000618516 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.92□□□□□ -1.46
SYCP1-210ENST00000618516 RPS6KA4O75676 772 aa5.92□□□□□ -1.46
SYCP1-210ENST00000618516 MYD88Q99836 296 aa5.92□□□□□ -1.46
SYCP1-210ENST00000618516 SYT17Q9BSW7 474 aa5.92□□□□□ -1.46
SYCP1-210ENST00000618516 TNNQ9UQP3 1299 aa5.92□□□□□ -1.46
SYCP1-210ENST00000618516 BTAF1O14981 1849 aa5.92□□□□□ -1.46
SYCP1-210ENST00000618516 COL15A1P39059 1388 aa5.92□□□□□ -1.46
SYCP1-210ENST00000618516 ANKRD26Q9UPS8 1709 aa5.92□□□□□ -1.46
SYCP1-210ENST00000618516 PI4KAP2A4QPH2 592 aa5.92□□□□□ -1.46
SYCP1-210ENST00000618516 BCAR3O75815 825 aa5.92□□□□□ -1.46
SYCP1-210ENST00000618516 PI4KAP1Q8N8J0 262 aa5.92□□□□□ -1.46
SYCP1-210ENST00000618516 CHL1O00533 1208 aa5.91□□□□□ -1.46
SYCP1-210ENST00000618516 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.91□□□□□ -1.46
SYCP1-210ENST00000618516 CAPN15O75808 1086 aa5.91□□□□□ -1.46
SYCP1-210ENST00000618516 SERPINB2P05120 415 aa5.91□□□□□ -1.46
SYCP1-210ENST00000618516 DDR1Q08345 913 aa5.91□□□□□ -1.46
SYCP1-210ENST00000618516 TRMT112Q9UI30 125 aaKnown RBP5.91□□□□□ -1.46
SYCP1-210ENST00000618516 ABCC6O95255 1503 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms