RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 C4BP0C0L5 1744 aa29.35■■■□□ 2.29
CBWD3-213ENST00000618217 ELL2O00472 640 aaPredicted RBP29.34■■■□□ 2.29
CBWD3-213ENST00000618217 SOS1Q07889 1333 aaPredicted RBP29.33■■■□□ 2.29
CBWD3-213ENST00000618217 STARD3NLO95772 234 aa29.32■■■□□ 2.28
CBWD3-213ENST00000618217 TWISTNBQ3B726 338 aaPredicted RBP29.32■■■□□ 2.28
CBWD3-213ENST00000618217 RC3H1Q5TC82 1133 aaKnown RBP29.31■■■□□ 2.28
CBWD3-213ENST00000618217 INTS5Q6P9B9 1019 aaKnown RBP29.31■■■□□ 2.28
CBWD3-213ENST00000618217 CNTNAP4Q9C0A0 1308 aa29.31■■■□□ 2.28
CBWD3-213ENST00000618217 VAMP4O75379 141 aa29.31■■■□□ 2.28
CBWD3-213ENST00000618217 HMGB2P26583 209 aaKnown RBP29.31■■■□□ 2.28
CBWD3-213ENST00000618217 CRKLP46109 303 aaKnown RBP29.31■■■□□ 2.28
CBWD3-213ENST00000618217 AKT1S1Q96B36 256 aa29.3■■■□□ 2.28
CBWD3-213ENST00000618217 A1BGP04217 495 aa29.28■■■□□ 2.28
CBWD3-213ENST00000618217 EIF2S2P20042 333 aaKnown RBP29.27■■■□□ 2.28
CBWD3-213ENST00000618217 ZNF827Q17R98 1081 aa29.27■■■□□ 2.28
CBWD3-213ENST00000618217 ANO8Q9HCE9 1232 aaPredicted RBP29.27■■■□□ 2.28
CBWD3-213ENST00000618217 CCDC87Q9NVE4 849 aa29.27■■■□□ 2.28
CBWD3-213ENST00000618217 UBR3Q6ZT12 1888 aa29.26■■■□□ 2.28
CBWD3-213ENST00000618217 NBPF26B4DH59 902 aa29.26■■■□□ 2.27
CBWD3-213ENST00000618217 HDGFL1Q5TGJ6 251 aa29.26■■■□□ 2.27
CBWD3-213ENST00000618217 NBPF14Q5TI25 921 aa29.26■■■□□ 2.27
CBWD3-213ENST00000618217 NBPF10Q6P3W6 841 aaKnown RBP29.26■■■□□ 2.27
CBWD3-213ENST00000618217 NBPF15Q8N660 670 aa29.26■■■□□ 2.27
CBWD3-213ENST00000618217 TUBGCP6Q96RT7 1819 aa29.24■■■□□ 2.27
CBWD3-213ENST00000618217 PDIA6Q15084 440 aa29.24■■■□□ 2.27
CBWD3-213ENST00000618217 NECTIN2Q92692 538 aa29.24■■■□□ 2.27
CBWD3-213ENST00000618217 ZBTB1Q9Y2K1 713 aa29.24■■■□□ 2.27
CBWD3-213ENST00000618217 AMIGO3Q86WK7 504 aa29.23■■■□□ 2.27
CBWD3-213ENST00000618217 ERBB4Q15303 1308 aa29.23■■■□□ 2.27
CBWD3-213ENST00000618217 RPS6KA4O75676 772 aa29.22■■■□□ 2.27
CBWD3-213ENST00000618217 SLC15A2Q16348 729 aa29.22■■■□□ 2.27
CBWD3-213ENST00000618217 CT47B1P0C2W7 299 aaPredicted RBP29.21■■■□□ 2.27
CBWD3-213ENST00000618217 PIP4K2AP48426 406 aaPredicted RBP29.21■■■□□ 2.27
CBWD3-213ENST00000618217 LRP10Q7Z4F1 713 aa29.21■■■□□ 2.27
CBWD3-213ENST00000618217 AK7Q96M32 723 aa29.21■■■□□ 2.27
CBWD3-213ENST00000618217 GNPATO15228 680 aa29.2■■■□□ 2.27
CBWD3-213ENST00000618217 CCDC30Q5VVM6 783 aa29.2■■■□□ 2.27
CBWD3-213ENST00000618217 CHMP4AQ9BY43 222 aa29.2■■■□□ 2.27
CBWD3-213ENST00000618217 CACNA1FO60840 1977 aa29.2■■■□□ 2.27
CBWD3-213ENST00000618217 QSER1Q2KHR3 1735 aa29.2■■■□□ 2.26
CBWD3-213ENST00000618217 CANXP27824 592 aaKnown RBP29.2■■■□□ 2.26
CBWD3-213ENST00000618217 EIF5P55010 431 aaKnown RBP29.2■■■□□ 2.26
CBWD3-213ENST00000618217 PROSER3Q2NL68 480 aa29.2■■■□□ 2.26
CBWD3-213ENST00000618217 DDX21Q9NR30 783 aaKnown RBP eCLIP29.2■■■□□ 2.26
CBWD3-213ENST00000618217 CHPF2Q9P2E5 772 aa29.2■■■□□ 2.26
CBWD3-213ENST00000618217 IL6STP40189 918 aaPredicted RBP29.19■■■□□ 2.26
CBWD3-213ENST00000618217 STK32BQ9NY57 414 aa29.19■■■□□ 2.26
CBWD3-213ENST00000618217 SMIM5Q71RC9 77 aa29.18■■■□□ 2.26
CBWD3-213ENST00000618217 ZNF428Q96B54 188 aa29.18■■■□□ 2.26
CBWD3-213ENST00000618217 DBF4Q9UBU7 674 aaPredicted RBP29.18■■■□□ 2.26
CBWD3-213ENST00000618217 TFCP2L1Q9NZI6 479 aa29.17■■■□□ 2.26
CBWD3-213ENST00000618217 RTCBQ9Y3I0 505 aaKnown RBP29.17■■■□□ 2.26
CBWD3-213ENST00000618217 TCERG1O14776 1098 aaKnown RBP29.16■■■□□ 2.26
CBWD3-213ENST00000618217 ANXA1P04083 346 aa29.16■■■□□ 2.26
CBWD3-213ENST00000618217 MYL6BP14649 208 aa29.15■■■□□ 2.26
CBWD3-213ENST00000618217 SSFA2P28290 1259 aa29.15■■■□□ 2.26
CBWD3-213ENST00000618217 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.14■■■□□ 2.26
CBWD3-213ENST00000618217 PNPLA7Q6ZV29 1317 aa29.14■■■□□ 2.25
CBWD3-213ENST00000618217 ADRA2BP18089 450 aa29.13■■■□□ 2.25
CBWD3-213ENST00000618217 SSH1Q8WYL5 1049 aa29.12■■■□□ 2.25
CBWD3-213ENST00000618217 STK31Q9BXU1 1019 aa29.12■■■□□ 2.25
CBWD3-213ENST00000618217 HYPKQ9NX55 129 aa29.12■■■□□ 2.25
CBWD3-213ENST00000618217 C4AP0C0L4 1744 aa29.12■■■□□ 2.25
CBWD3-213ENST00000618217 COL15A1P39059 1388 aa29.12■■■□□ 2.25
CBWD3-213ENST00000618217 SLC4A2P04920 1241 aa29.12■■■□□ 2.25
CBWD3-213ENST00000618217 ARHGEF1Q92888 912 aaKnown RBP29.12■■■□□ 2.25
CBWD3-213ENST00000618217 RARSP54136 660 aaKnown RBP29.11■■■□□ 2.25
CBWD3-213ENST00000618217 ALDH1L2Q3SY69 923 aa29.11■■■□□ 2.25
CBWD3-213ENST00000618217 PHF14O94880 888 aa29.1■■■□□ 2.25
CBWD3-213ENST00000618217 TRAPPC3LQ5T215 181 aa29.1■■■□□ 2.25
CBWD3-213ENST00000618217 COL23A1Q86Y22 540 aaPredicted RBP29.1■■■□□ 2.25
CBWD3-213ENST00000618217 FLAD1Q8NFF5 587 aa29.09■■■□□ 2.25
CBWD3-213ENST00000618217 PHAXQ9H814 394 aaKnown RBP29.09■■■□□ 2.25
CBWD3-213ENST00000618217 ZNF330Q9Y3S2 320 aaPredicted RBP29.09■■■□□ 2.25
CBWD3-213ENST00000618217 G2E3Q7L622 706 aa29.08■■■□□ 2.25
CBWD3-213ENST00000618217 MRPL50Q8N5N7 158 aaKnown RBP29.08■■■□□ 2.25
CBWD3-213ENST00000618217 R3HDM1Q15032 1099 aaKnown RBP29.07■■■□□ 2.24
CBWD3-213ENST00000618217 COPS6Q7L5N1 327 aa29.07■■■□□ 2.24
CBWD3-213ENST00000618217 XAGE3Q8WTP9 111 aa29.07■■■□□ 2.24
CBWD3-213ENST00000618217 A0A087WZG4 1122 aa29.06■■■□□ 2.24
CBWD3-213ENST00000618217 BRPF1P55201 1214 aaPredicted RBP29.06■■■□□ 2.24
CBWD3-213ENST00000618217 TTLL7Q6ZT98 887 aa29.06■■■□□ 2.24
CBWD3-213ENST00000618217 PDGFDQ9GZP0 370 aaPredicted RBP29.06■■■□□ 2.24
CBWD3-213ENST00000618217 BCL2L13Q9BXK5 485 aa29.05■■■□□ 2.24
CBWD3-213ENST00000618217 TBC1D2BQ9UPU7 963 aa29.05■■■□□ 2.24
CBWD3-213ENST00000618217 CASZ1Q86V15 1759 aa29.05■■■□□ 2.24
CBWD3-213ENST00000618217 DZIP3Q86Y13 1208 aaKnown RBP29.05■■■□□ 2.24
CBWD3-213ENST00000618217 NARFQ9UHQ1 456 aa29.05■■■□□ 2.24
CBWD3-213ENST00000618217 RFC4P35249 363 aa29.04■■■□□ 2.24
CBWD3-213ENST00000618217 SMC4Q9NTJ3 1288 aa29.04■■■□□ 2.24
CBWD3-213ENST00000618217 USP42Q9H9J4 1324 aaKnown RBP29.04■■■□□ 2.24
CBWD3-213ENST00000618217 BCORQ6W2J9 1755 aa29.03■■■□□ 2.24
CBWD3-213ENST00000618217 CAMTA2O94983 1202 aa29.03■■■□□ 2.24
CBWD3-213ENST00000618217 AIMP1Q12904 312 aaKnown RBP29.03■■■□□ 2.24
CBWD3-213ENST00000618217 NPM2Q86SE8 214 aaKnown RBP29.03■■■□□ 2.24
CBWD3-213ENST00000618217 BCAR3O75815 825 aa29.02■■■□□ 2.24
CBWD3-213ENST00000618217 FLIIQ13045 1269 aa29.02■■■□□ 2.24
CBWD3-213ENST00000618217 SRP68Q9UHB9 627 aaKnown RBP29.02■■■□□ 2.24
CBWD3-213ENST00000618217 PSDA5PKW4 1024 aaPredicted RBP29.02■■■□□ 2.24
CBWD3-213ENST00000618217 SCN7AQ01118 1682 aa29.01■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms