RNA–Protein interactions for RNA: ENST00000617753.4

LTBP4-235, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-235ENST00000617753 C10orf71Q711Q0 1435 aa22.43■■□□□ 1.18
LTBP4-235ENST00000617753 MCM10Q7L590 875 aa22.43■■□□□ 1.18
LTBP4-235ENST00000617753 ZNF784Q8NCA9 323 aaPredicted RBP22.43■■□□□ 1.18
LTBP4-235ENST00000617753 TEX13AQ9BXU3 409 aaPredicted RBP22.43■■□□□ 1.18
LTBP4-235ENST00000617753 CANXP27824 592 aaKnown RBP22.42■■□□□ 1.18
LTBP4-235ENST00000617753 KIF13BQ9NQT8 1826 aa22.42■■□□□ 1.18
LTBP4-235ENST00000617753 HTATSF1O43719 755 aaKnown RBP22.41■■□□□ 1.18
LTBP4-235ENST00000617753 USPL1Q5W0Q7 1092 aa22.41■■□□□ 1.18
LTBP4-235ENST00000617753 PXDNLA1KZ92 1463 aa22.41■■□□□ 1.18
LTBP4-235ENST00000617753 TGFB2P61812 414 aa22.4■■□□□ 1.18
LTBP4-235ENST00000617753 PNNQ9H307 717 aaKnown RBP22.4■■□□□ 1.18
LTBP4-235ENST00000617753 NARFQ9UHQ1 456 aa22.4■■□□□ 1.18
LTBP4-235ENST00000617753 DCTN1Q14203 1278 aa22.39■■□□□ 1.17
LTBP4-235ENST00000617753 MAPK8IP3Q9UPT6 1336 aa22.38■■□□□ 1.17
LTBP4-235ENST00000617753 KCNQ3O43525 872 aa22.38■■□□□ 1.17
LTBP4-235ENST00000617753 DDR1Q08345 913 aa22.38■■□□□ 1.17
LTBP4-235ENST00000617753 A0A087WZG4 1122 aa22.37■■□□□ 1.17
LTBP4-235ENST00000617753 NPM2Q86SE8 214 aaKnown RBP22.37■■□□□ 1.17
LTBP4-235ENST00000617753 ZNF330Q9Y3S2 320 aaPredicted RBP22.37■■□□□ 1.17
LTBP4-235ENST00000617753 N4BP2Q86UW6 1770 aaPredicted RBP22.37■■□□□ 1.17
LTBP4-235ENST00000617753 A0A0G2JLW4 131 aa22.36■■□□□ 1.17
LTBP4-235ENST00000617753 KIAA1551Q9HCM1 1747 aa22.36■■□□□ 1.17
LTBP4-235ENST00000617753 MYBBP1AQ9BQG0 1328 aaKnown RBP22.35■■□□□ 1.17
LTBP4-235ENST00000617753 POLRMTO00411 1230 aaKnown RBP22.35■■□□□ 1.17
LTBP4-235ENST00000617753 TM4SF1P30408 202 aa22.35■■□□□ 1.17
LTBP4-235ENST00000617753 EIF5P55010 431 aaKnown RBP22.35■■□□□ 1.17
LTBP4-235ENST00000617753 PLEKHF1Q96S99 279 aa22.35■■□□□ 1.17
LTBP4-235ENST00000617753 DLG5Q8TDM6 1919 aa22.34■■□□□ 1.17
LTBP4-235ENST00000617753 DPEP1P16444 411 aa22.34■■□□□ 1.17
LTBP4-235ENST00000617753 TAF7Q15545 349 aaPredicted RBP22.34■■□□□ 1.17
LTBP4-235ENST00000617753 NFE2L2Q16236 605 aa22.34■■□□□ 1.17
LTBP4-235ENST00000617753 A1BGP04217 495 aa22.33■■□□□ 1.17
LTBP4-235ENST00000617753 SNRPA1P09661 255 aaKnown RBP22.33■■□□□ 1.17
LTBP4-235ENST00000617753 IL6STP40189 918 aaPredicted RBP22.33■■□□□ 1.17
LTBP4-235ENST00000617753 NFIXQ14938 502 aa22.33■■□□□ 1.17
LTBP4-235ENST00000617753 BCS1LQ9Y276 419 aa22.33■■□□□ 1.17
LTBP4-235ENST00000617753 BCL2L12Q9HB09 334 aa22.32■■□□□ 1.16
LTBP4-235ENST00000617753 PNISRQ8TF01 805 aaKnown RBP22.3■■□□□ 1.16
LTBP4-235ENST00000617753 TBC1D2BQ9UPU7 963 aa22.3■■□□□ 1.16
LTBP4-235ENST00000617753 USP16Q9Y5T5 823 aa22.3■■□□□ 1.16
LTBP4-235ENST00000617753 SCN7AQ01118 1682 aa22.3■■□□□ 1.16
LTBP4-235ENST00000617753 BICDL1Q6ZP65 573 aa22.29■■□□□ 1.16
LTBP4-235ENST00000617753 MIS18AQ9NYP9 233 aa22.29■■□□□ 1.16
LTBP4-235ENST00000617753 PRAMEF22A3QJZ6 481 aa22.28■■□□□ 1.16
LTBP4-235ENST00000617753 SERPINB2P05120 415 aa22.28■■□□□ 1.16
LTBP4-235ENST00000617753 ZEB1P37275 1124 aaPredicted RBP22.28■■□□□ 1.16
LTBP4-235ENST00000617753 PIM2Q9P1W9 311 aa22.28■■□□□ 1.16
LTBP4-235ENST00000617753 AFDNP55196 1824 aaKnown RBP22.28■■□□□ 1.16
LTBP4-235ENST00000617753 BRCA1P38398 1863 aaKnown RBP22.28■■□□□ 1.16
LTBP4-235ENST00000617753 THUMPD2Q9BTF0 503 aaKnown RBP22.27■■□□□ 1.16
LTBP4-235ENST00000617753 ATP10DQ9P241 1426 aa22.26■■□□□ 1.15
LTBP4-235ENST00000617753 CHRNA5P30532 468 aa22.26■■□□□ 1.15
LTBP4-235ENST00000617753 PIP4K2AP48426 406 aaPredicted RBP22.26■■□□□ 1.15
LTBP4-235ENST00000617753 WDR43Q15061 677 aaKnown RBP eCLIP22.26■■□□□ 1.15
LTBP4-235ENST00000617753 NRXN2Q9P2S2 1712 aa22.26■■□□□ 1.15
LTBP4-235ENST00000617753 KDM3BQ7LBC6 1761 aa22.25■■□□□ 1.15
LTBP4-235ENST00000617753 KCNA3P22001 575 aa22.25■■□□□ 1.15
LTBP4-235ENST00000617753 DALRD3Q5D0E6 543 aaKnown RBP22.25■■□□□ 1.15
LTBP4-235ENST00000617753 TBC1D9BQ66K14 1250 aa22.25■■□□□ 1.15
LTBP4-235ENST00000617753 DZIP3Q86Y13 1208 aaKnown RBP22.25■■□□□ 1.15
LTBP4-235ENST00000617753 RIPK4P57078 832 aa22.24■■□□□ 1.15
LTBP4-235ENST00000617753 ARHGAP27Q6ZUM4 889 aa22.24■■□□□ 1.15
LTBP4-235ENST00000617753 LAMB4A4D0S4 1761 aa22.23■■□□□ 1.15
LTBP4-235ENST00000617753 CAMTA2O94983 1202 aa22.23■■□□□ 1.15
LTBP4-235ENST00000617753 LMOD3Q0VAK6 560 aa22.23■■□□□ 1.15
LTBP4-235ENST00000617753 PRKRIP1Q9H875 184 aaPredicted RBP22.23■■□□□ 1.15
LTBP4-235ENST00000617753 CARMIL3Q8ND23 1372 aa22.23■■□□□ 1.15
LTBP4-235ENST00000617753 GIGYF1O75420 1035 aaPredicted RBP22.22■■□□□ 1.15
LTBP4-235ENST00000617753 ADCY9O60503 1353 aa22.22■■□□□ 1.15
LTBP4-235ENST00000617753 BCORQ6W2J9 1755 aa22.22■■□□□ 1.15
LTBP4-235ENST00000617753 ARFGEF1Q9Y6D6 1849 aa22.22■■□□□ 1.15
LTBP4-235ENST00000617753 NPHP1O15259 732 aa22.21■■□□□ 1.15
LTBP4-235ENST00000617753 CCDC146Q8IYE0 955 aa22.21■■□□□ 1.15
LTBP4-235ENST00000617753 SETDB2Q96T68 719 aa22.21■■□□□ 1.15
LTBP4-235ENST00000617753 ZNF652Q9Y2D9 606 aa22.21■■□□□ 1.15
LTBP4-235ENST00000617753 TMPOP42166 694 aaKnown RBP22.2■■□□□ 1.14
LTBP4-235ENST00000617753 EIF4A1P60842 406 aaKnown RBP22.2■■□□□ 1.14
LTBP4-235ENST00000617753 NBPF26B4DH59 902 aa22.19■■□□□ 1.14
LTBP4-235ENST00000617753 NBPF10Q6P3W6 841 aaKnown RBP22.19■■□□□ 1.14
LTBP4-235ENST00000617753 C2CD5Q86YS7 1000 aa22.19■■□□□ 1.14
LTBP4-235ENST00000617753 NBPF15Q8N660 670 aa22.19■■□□□ 1.14
LTBP4-235ENST00000617753 ZNF526Q8TF50 670 aaPredicted RBP22.19■■□□□ 1.14
LTBP4-235ENST00000617753 GPBP1L1Q9HC44 474 aaPredicted RBP22.19■■□□□ 1.14
LTBP4-235ENST00000617753 TSPYL4Q9UJ04 414 aa22.19■■□□□ 1.14
LTBP4-235ENST00000617753 H0YIN7 160 aa22.18■■□□□ 1.14
LTBP4-235ENST00000617753 CNBD1Q8NA66 436 aa22.18■■□□□ 1.14
LTBP4-235ENST00000617753 RRP7AQ9Y3A4 280 aaKnown RBP22.18■■□□□ 1.14
LTBP4-235ENST00000617753 NEUROD2Q15784 382 aa22.17■■□□□ 1.14
LTBP4-235ENST00000617753 PRR5LQ6MZQ0 368 aa22.17■■□□□ 1.14
LTBP4-235ENST00000617753 CLEC4GQ6UXB4 293 aa22.17■■□□□ 1.14
LTBP4-235ENST00000617753 RUNDC1Q96C34 613 aa22.17■■□□□ 1.14
LTBP4-235ENST00000617753 C1QTNF8P60827 252 aa22.16■■□□□ 1.14
LTBP4-235ENST00000617753 ST5P78524 1137 aa22.16■■□□□ 1.14
LTBP4-235ENST00000617753 DLEC1Q9Y238 1755 aa22.16■■□□□ 1.14
LTBP4-235ENST00000617753 PDE6BP35913 854 aa22.15■■□□□ 1.14
LTBP4-235ENST00000617753 CCDC24Q8N4L8 307 aa22.15■■□□□ 1.14
LTBP4-235ENST00000617753 TTLL6Q8N841 843 aa22.15■■□□□ 1.14
LTBP4-235ENST00000617753 BRIP1Q9BX63 1249 aa22.15■■□□□ 1.14
LTBP4-235ENST00000617753 ADAMTS8Q9UP79 889 aa22.15■■□□□ 1.14
LTBP4-235ENST00000617753 PDZRN3Q9UPQ7 1066 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms