RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 ANAPC15P60006 121 aa14.34□□□□□ -0.11
C11orf54-215ENST00000617482 ANXA1P04083 346 aa14.33□□□□□ -0.12
C11orf54-215ENST00000617482 PDE4CQ08493 712 aa14.33□□□□□ -0.12
C11orf54-215ENST00000617482 CUL4AQ13619 759 aa14.33□□□□□ -0.12
C11orf54-215ENST00000617482 SYCE3A1L190 88 aa14.33□□□□□ -0.12
C11orf54-215ENST00000617482 KCNQ3O43525 872 aa14.33□□□□□ -0.12
C11orf54-215ENST00000617482 BRD1O95696 1058 aa14.33□□□□□ -0.12
C11orf54-215ENST00000617482 RHPN1Q8TCX5 695 aa14.33□□□□□ -0.12
C11orf54-215ENST00000617482 BABAM1Q9NWV8 329 aa14.33□□□□□ -0.12
C11orf54-215ENST00000617482 CHPF2Q9P2E5 772 aa14.33□□□□□ -0.12
C11orf54-215ENST00000617482 PI4KAP2A4QPH2 592 aa14.32□□□□□ -0.12
C11orf54-215ENST00000617482 NBPF6Q5VWK0 638 aa14.32□□□□□ -0.12
C11orf54-215ENST00000617482 PI4KAP1Q8N8J0 262 aa14.32□□□□□ -0.12
C11orf54-215ENST00000617482 NBPF4Q96M43 638 aa14.32□□□□□ -0.12
C11orf54-215ENST00000617482 NWD1Q149M9 1564 aa14.31□□□□□ -0.12
C11orf54-215ENST00000617482 RAB11FIP3O75154 756 aa14.31□□□□□ -0.12
C11orf54-215ENST00000617482 EIF4A1P60842 406 aaKnown RBP14.31□□□□□ -0.12
C11orf54-215ENST00000617482 ARHGAP23Q9P227 1491 aa14.31□□□□□ -0.12
C11orf54-215ENST00000617482 POLA2Q14181 598 aa14.31□□□□□ -0.12
C11orf54-215ENST00000617482 PI4K2BQ8TCG2 481 aa14.31□□□□□ -0.12
C11orf54-215ENST00000617482 INTS4Q96HW7 963 aaKnown RBP14.31□□□□□ -0.12
C11orf54-215ENST00000617482 XRN1Q8IZH2 1706 aaKnown RBP14.3□□□□□ -0.12
C11orf54-215ENST00000617482 SLIT1O75093 1534 aa14.3□□□□□ -0.12
C11orf54-215ENST00000617482 ZSCAN30Q86W11 494 aa14.3□□□□□ -0.12
C11orf54-215ENST00000617482 LARP6Q9BRS8 491 aaKnown RBP14.3□□□□□ -0.12
C11orf54-215ENST00000617482 GDPD2Q9HCC8 539 aa14.3□□□□□ -0.12
C11orf54-215ENST00000617482 AOX1Q06278 1338 aa14.3□□□□□ -0.12
C11orf54-215ENST00000617482 HSPA4P34932 840 aa14.3□□□□□ -0.12
C11orf54-215ENST00000617482 DNAAF4Q8WXU2 420 aa14.3□□□□□ -0.12
C11orf54-215ENST00000617482 KIF1BPQ96EK5 621 aa14.3□□□□□ -0.12
C11orf54-215ENST00000617482 PHF8Q9UPP1 1060 aa14.3□□□□□ -0.12
C11orf54-215ENST00000617482 FER1L4A9Z1Z3 1794 aa14.29□□□□□ -0.12
C11orf54-215ENST00000617482 TULP1O00294 542 aaPredicted RBP14.29□□□□□ -0.12
C11orf54-215ENST00000617482 BEND3Q5T5X7 828 aa14.29□□□□□ -0.12
C11orf54-215ENST00000617482 LRSAM1Q6UWE0 723 aa14.29□□□□□ -0.12
C11orf54-215ENST00000617482 IP6K1Q92551 441 aa14.29□□□□□ -0.12
C11orf54-215ENST00000617482 FAM208AQ9UK61 1670 aaKnown RBP14.29□□□□□ -0.12
C11orf54-215ENST00000617482 SETD1BQ9UPS6 1966 aaKnown RBP14.29□□□□□ -0.12
C11orf54-215ENST00000617482 LRRC37A3O60309 1634 aa14.29□□□□□ -0.12
C11orf54-215ENST00000617482 CWC27Q6UX04 472 aaKnown RBP14.29□□□□□ -0.12
C11orf54-215ENST00000617482 MPRIPQ6WCQ1 1025 aa14.29□□□□□ -0.12
C11orf54-215ENST00000617482 LRRC59Q96AG4 307 aaKnown RBP14.29□□□□□ -0.12
C11orf54-215ENST00000617482 BTBD11A6QL63 1104 aa14.28□□□□□ -0.12
C11orf54-215ENST00000617482 MSNP26038 577 aaKnown RBP14.28□□□□□ -0.12
C11orf54-215ENST00000617482 RNF214Q8ND24 703 aa14.28□□□□□ -0.12
C11orf54-215ENST00000617482 ANKARQ7Z5J8 1434 aa14.28□□□□□ -0.12
C11orf54-215ENST00000617482 CEMIPQ8WUJ3 1361 aa14.28□□□□□ -0.12
C11orf54-215ENST00000617482 SGSM2O43147 1006 aa14.27□□□□□ -0.12
C11orf54-215ENST00000617482 MBD3O95983 291 aa14.27□□□□□ -0.12
C11orf54-215ENST00000617482 TEFQ10587 303 aa14.27□□□□□ -0.12
C11orf54-215ENST00000617482 OS9Q13438 667 aaPredicted RBP14.27□□□□□ -0.12
C11orf54-215ENST00000617482 SPG7Q9UQ90 795 aa14.27□□□□□ -0.12
C11orf54-215ENST00000617482 PXDNLA1KZ92 1463 aa14.27□□□□□ -0.12
C11orf54-215ENST00000617482 TPRNQ4KMQ1 711 aa14.27□□□□□ -0.13
C11orf54-215ENST00000617482 RASEFQ8IZ41 740 aa14.27□□□□□ -0.13
C11orf54-215ENST00000617482 CNTROBQ8N137 903 aa14.27□□□□□ -0.13
C11orf54-215ENST00000617482 SNX14Q9Y5W7 946 aa14.27□□□□□ -0.13
C11orf54-215ENST00000617482 GADD45BO75293 160 aaPredicted RBP14.26□□□□□ -0.13
C11orf54-215ENST00000617482 PSME1Q06323 249 aa14.26□□□□□ -0.13
C11orf54-215ENST00000617482 IL17RAQ96F46 866 aa14.26□□□□□ -0.13
C11orf54-215ENST00000617482 ZNF530Q6P9A1 599 aaPredicted RBP14.26□□□□□ -0.13
C11orf54-215ENST00000617482 CPA1P15085 419 aa14.25□□□□□ -0.13
C11orf54-215ENST00000617482 ESCO1Q5FWF5 840 aa14.25□□□□□ -0.13
C11orf54-215ENST00000617482 KIAA1211Q6ZU35 1233 aa14.25□□□□□ -0.13
C11orf54-215ENST00000617482 LSG1Q9H089 658 aaKnown RBP14.25□□□□□ -0.13
C11orf54-215ENST00000617482 RAD50Q92878 1312 aa14.25□□□□□ -0.13
C11orf54-215ENST00000617482 MARF1Q9Y4F3 1742 aaKnown RBP14.25□□□□□ -0.13
C11orf54-215ENST00000617482 DTNBO60941 627 aa14.25□□□□□ -0.13
C11orf54-215ENST00000617482 TRHP20396 242 aaPredicted RBP14.25□□□□□ -0.13
C11orf54-215ENST00000617482 USP48Q86UV5 1035 aa14.25□□□□□ -0.13
C11orf54-215ENST00000617482 PDLIM2Q96JY6 352 aa14.25□□□□□ -0.13
C11orf54-215ENST00000617482 TUBGCP6Q96RT7 1819 aa14.24□□□□□ -0.13
C11orf54-215ENST00000617482 WDR33Q9C0J8 1336 aaKnown RBP14.24□□□□□ -0.13
C11orf54-215ENST00000617482 AK2P54819 239 aa14.24□□□□□ -0.13
C11orf54-215ENST00000617482 HSP90AB4PQ58FF6 505 aa14.24□□□□□ -0.13
C11orf54-215ENST00000617482 C9orf78Q9NZ63 289 aaPredicted RBP14.24□□□□□ -0.13
C11orf54-215ENST00000617482 PA2G4Q9UQ80 394 aaKnown RBP14.24□□□□□ -0.13
C11orf54-215ENST00000617482 MAP3K2Q9Y2U5 619 aa14.24□□□□□ -0.13
C11orf54-215ENST00000617482 ADCY9O60503 1353 aa14.24□□□□□ -0.13
C11orf54-215ENST00000617482 PRAMEF22A3QJZ6 481 aa14.23□□□□□ -0.13
C11orf54-215ENST00000617482 EPB41L2O43491 1005 aaKnown RBP14.23□□□□□ -0.13
C11orf54-215ENST00000617482 HOXB7P09629 217 aa14.23□□□□□ -0.13
C11orf54-215ENST00000617482 XPCQ01831 940 aaPredicted RBP14.23□□□□□ -0.13
C11orf54-215ENST00000617482 PROSER3Q2NL68 480 aa14.23□□□□□ -0.13
C11orf54-215ENST00000617482 AKAP4Q5JQC9 854 aa14.23□□□□□ -0.13
C11orf54-215ENST00000617482 RUFY3Q7L099 469 aa14.23□□□□□ -0.13
C11orf54-215ENST00000617482 CLASRPQ8N2M8 674 aaKnown RBP14.23□□□□□ -0.13
C11orf54-215ENST00000617482 TTC14Q96N46 770 aa14.23□□□□□ -0.13
C11orf54-215ENST00000617482 DBF4Q9UBU7 674 aaPredicted RBP14.23□□□□□ -0.13
C11orf54-215ENST00000617482 GLRX3O76003 335 aaKnown RBP14.22□□□□□ -0.13
C11orf54-215ENST00000617482 CASTP20810 708 aaKnown RBP14.22□□□□□ -0.13
C11orf54-215ENST00000617482 CWF19L2Q2TBE0 894 aaKnown RBP14.22□□□□□ -0.13
C11orf54-215ENST00000617482 PLEKHO1Q53GL0 409 aaPredicted RBP14.22□□□□□ -0.13
C11orf54-215ENST00000617482 DIAPH3Q9NSV4 1193 aa14.22□□□□□ -0.13
C11orf54-215ENST00000617482 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.22□□□□□ -0.13
C11orf54-215ENST00000617482 NOL7Q9UMY1 257 aaKnown RBP14.22□□□□□ -0.13
C11orf54-215ENST00000617482 CACNA1FO60840 1977 aa14.22□□□□□ -0.13
C11orf54-215ENST00000617482 PTH1RQ03431 593 aa14.22□□□□□ -0.13
C11orf54-215ENST00000617482 HS1BP3Q53T59 392 aa14.22□□□□□ -0.13
C11orf54-215ENST00000617482 LMOD2Q6P5Q4 547 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms