RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 POLA2Q14181 598 aa19.43■□□□□ 0.7
NR1H3-235ENST00000616973 EXOC6BQ9Y2D4 811 aa19.43■□□□□ 0.7
NR1H3-235ENST00000616973 NHSL1Q5SYE7 1610 aa19.43■□□□□ 0.7
NR1H3-235ENST00000616973 ALDH1L1O75891 902 aa19.43■□□□□ 0.7
NR1H3-235ENST00000616973 SDSP20132 328 aa19.43■□□□□ 0.7
NR1H3-235ENST00000616973 ZNF790Q6PG37 636 aa19.43■□□□□ 0.7
NR1H3-235ENST00000616973 HSP90AB1P08238 724 aaKnown RBP19.42■□□□□ 0.7
NR1H3-235ENST00000616973 KSR2Q6VAB6 950 aa19.42■□□□□ 0.7
NR1H3-235ENST00000616973 DCAF5Q96JK2 942 aa19.42■□□□□ 0.7
NR1H3-235ENST00000616973 SLAIN2Q9P270 581 aa19.42■□□□□ 0.7
NR1H3-235ENST00000616973 KIF2CQ99661 725 aa19.41■□□□□ 0.7
NR1H3-235ENST00000616973 DDX21Q9NR30 783 aaKnown RBP eCLIP19.41■□□□□ 0.7
NR1H3-235ENST00000616973 RAB11FIP3O75154 756 aa19.41■□□□□ 0.7
NR1H3-235ENST00000616973 ANXA1P04083 346 aa19.41■□□□□ 0.7
NR1H3-235ENST00000616973 CASC1Q6TDU7 716 aa19.41■□□□□ 0.7
NR1H3-235ENST00000616973 HSCBQ8IWL3 235 aa19.41■□□□□ 0.7
NR1H3-235ENST00000616973 LAMB4A4D0S4 1761 aa19.4■□□□□ 0.7
NR1H3-235ENST00000616973 ZNF335Q9H4Z2 1342 aaPredicted RBP19.4■□□□□ 0.7
NR1H3-235ENST00000616973 DEKP35659 375 aaKnown RBP19.39■□□□□ 0.7
NR1H3-235ENST00000616973 PROSER3Q2NL68 480 aa19.39■□□□□ 0.7
NR1H3-235ENST00000616973 STAP2Q9UGK3 403 aa19.39■□□□□ 0.7
NR1H3-235ENST00000616973 HDAC5Q9UQL6 1122 aa19.39■□□□□ 0.7
NR1H3-235ENST00000616973 AOX1Q06278 1338 aa19.39■□□□□ 0.69
NR1H3-235ENST00000616973 WDR17Q8IZU2 1322 aa19.39■□□□□ 0.69
NR1H3-235ENST00000616973 PRAMEF22A3QJZ6 481 aa19.39■□□□□ 0.69
NR1H3-235ENST00000616973 CYP27B1O15528 508 aa19.39■□□□□ 0.69
NR1H3-235ENST00000616973 NBPF7P0C2Y1 421 aaPredicted RBP19.39■□□□□ 0.69
NR1H3-235ENST00000616973 PPP1R42Q7Z4L9 355 aa19.39■□□□□ 0.69
NR1H3-235ENST00000616973 MAP3K2Q9Y2U5 619 aa19.39■□□□□ 0.69
NR1H3-235ENST00000616973 DDX58O95786 925 aaKnown RBP19.38■□□□□ 0.69
NR1H3-235ENST00000616973 MTX1Q13505 466 aa19.38■□□□□ 0.69
NR1H3-235ENST00000616973 NFATC2IPQ8NCF5 419 aa19.38■□□□□ 0.69
NR1H3-235ENST00000616973 SLKQ9H2G2 1235 aaPredicted RBP19.38■□□□□ 0.69
NR1H3-235ENST00000616973 AK9Q5TCS8 1911 aa19.38■□□□□ 0.69
NR1H3-235ENST00000616973 MX1P20591 662 aa19.37■□□□□ 0.69
NR1H3-235ENST00000616973 PDIA6Q15084 440 aa19.37■□□□□ 0.69
NR1H3-235ENST00000616973 COL5A2P05997 1499 aaPredicted RBP19.37■□□□□ 0.69
NR1H3-235ENST00000616973 SLC39A6Q13433 755 aa19.36■□□□□ 0.69
NR1H3-235ENST00000616973 USP26Q9BXU7 913 aa19.36■□□□□ 0.69
NR1H3-235ENST00000616973 PRDM11Q9NQV5 511 aa19.36■□□□□ 0.69
NR1H3-235ENST00000616973 SHANK3Q9BYB0 1731 aa19.36■□□□□ 0.69
NR1H3-235ENST00000616973 GLI3P10071 1580 aa19.36■□□□□ 0.69
NR1H3-235ENST00000616973 HSP90AB4PQ58FF6 505 aa19.35■□□□□ 0.69
NR1H3-235ENST00000616973 LINS1Q8NG48 757 aa19.35■□□□□ 0.69
NR1H3-235ENST00000616973 BCL11AQ9H165 835 aa19.35■□□□□ 0.69
NR1H3-235ENST00000616973 UTYO14607 1347 aa19.35■□□□□ 0.69
NR1H3-235ENST00000616973 UBR2Q8IWV8 1755 aa19.35■□□□□ 0.69
NR1H3-235ENST00000616973 SRGAP3O43295 1099 aa19.35■□□□□ 0.69
NR1H3-235ENST00000616973 FRAT2O75474 233 aaPredicted RBP19.34■□□□□ 0.69
NR1H3-235ENST00000616973 SURF6O75683 361 aaKnown RBP19.33■□□□□ 0.69
NR1H3-235ENST00000616973 REC8O95072 547 aa19.33■□□□□ 0.69
NR1H3-235ENST00000616973 SNRPA1P09661 255 aaKnown RBP19.33■□□□□ 0.69
NR1H3-235ENST00000616973 ZNF496Q96IT1 587 aaPredicted RBP19.33■□□□□ 0.69
NR1H3-235ENST00000616973 PAPPAQ13219 1627 aa19.33■□□□□ 0.69
NR1H3-235ENST00000616973 TTC5Q8N0Z6 440 aa19.33■□□□□ 0.68
NR1H3-235ENST00000616973 KIF1BPQ96EK5 621 aa19.33■□□□□ 0.68
NR1H3-235ENST00000616973 C9orf78Q9NZ63 289 aaPredicted RBP19.33■□□□□ 0.68
NR1H3-235ENST00000616973 CHMP5Q9NZZ3 219 aa19.33■□□□□ 0.68
NR1H3-235ENST00000616973 PCDH11XQ9BZA7 1347 aa19.32■□□□□ 0.68
NR1H3-235ENST00000616973 PCDH11YQ9BZA8 1340 aa19.32■□□□□ 0.68
NR1H3-235ENST00000616973 ERC2O15083 957 aa19.32■□□□□ 0.68
NR1H3-235ENST00000616973 RHPN1Q8TCX5 695 aa19.32■□□□□ 0.68
NR1H3-235ENST00000616973 FMNL2Q96PY5 1086 aa19.32■□□□□ 0.68
NR1H3-235ENST00000616973 ARFGEF2Q9Y6D5 1785 aa19.32■□□□□ 0.68
NR1H3-235ENST00000616973 AFDNP55196 1824 aaKnown RBP19.31■□□□□ 0.68
NR1H3-235ENST00000616973 CABP4P57796 275 aa19.31■□□□□ 0.68
NR1H3-235ENST00000616973 LARP1Q6PKG0 1096 aaKnown RBP19.31■□□□□ 0.68
NR1H3-235ENST00000616973 RABEP1Q15276 862 aa19.31■□□□□ 0.68
NR1H3-235ENST00000616973 TOM1L2Q6ZVM7 507 aa19.31■□□□□ 0.68
NR1H3-235ENST00000616973 CARD10Q9BWT7 1032 aa19.31■□□□□ 0.68
NR1H3-235ENST00000616973 GRM8O00222 908 aa19.3■□□□□ 0.68
NR1H3-235ENST00000616973 DDIT3P35638 169 aa19.3■□□□□ 0.68
NR1H3-235ENST00000616973 ZCRB1Q8TBF4 217 aaKnown RBP19.3■□□□□ 0.68
NR1H3-235ENST00000616973 NKX1-1Q15270 411 aaPredicted RBP19.29■□□□□ 0.68
NR1H3-235ENST00000616973 CWF19L2Q2TBE0 894 aaKnown RBP19.29■□□□□ 0.68
NR1H3-235ENST00000616973 LRP10Q7Z4F1 713 aa19.29■□□□□ 0.68
NR1H3-235ENST00000616973 ERVV-2B6SEH9 535 aa19.28■□□□□ 0.68
NR1H3-235ENST00000616973 K7ELQ4 463 aaPredicted RBP19.28■□□□□ 0.68
NR1H3-235ENST00000616973 RIC3Q7Z5B4 369 aa19.28■□□□□ 0.68
NR1H3-235ENST00000616973 IL1RAPL2Q9NP60 686 aa19.28■□□□□ 0.68
NR1H3-235ENST00000616973 USP42Q9H9J4 1324 aaKnown RBP19.28■□□□□ 0.68
NR1H3-235ENST00000616973 AIMP1Q12904 312 aaKnown RBP19.27■□□□□ 0.68
NR1H3-235ENST00000616973 SPRYD3Q8NCJ5 442 aa19.27■□□□□ 0.68
NR1H3-235ENST00000616973 XAGE3Q8WTP9 111 aa19.27■□□□□ 0.68
NR1H3-235ENST00000616973 METTL22Q9BUU2 404 aaPredicted RBP19.27■□□□□ 0.68
NR1H3-235ENST00000616973 CIZ1Q9ULV3 898 aaPredicted RBP19.27■□□□□ 0.68
NR1H3-235ENST00000616973 USP16Q9Y5T5 823 aa19.27■□□□□ 0.68
NR1H3-235ENST00000616973 IL2RBP14784 551 aa19.27■□□□□ 0.67
NR1H3-235ENST00000616973 NEXNQ0ZGT2 675 aa19.27■□□□□ 0.67
NR1H3-235ENST00000616973 TSHZ3Q63HK5 1081 aa19.27■□□□□ 0.67
NR1H3-235ENST00000616973 ERBB4Q15303 1308 aa19.27■□□□□ 0.67
NR1H3-235ENST00000616973 IGKV5-2P06315 115 aa19.26■□□□□ 0.67
NR1H3-235ENST00000616973 COPS6Q7L5N1 327 aa19.26■□□□□ 0.67
NR1H3-235ENST00000616973 ERC1Q8IUD2 1116 aa19.26■□□□□ 0.67
NR1H3-235ENST00000616973 ESYT1Q9BSJ8 1104 aa19.26■□□□□ 0.67
NR1H3-235ENST00000616973 RBM42Q9BTD8 480 aaKnown RBP19.26■□□□□ 0.67
NR1H3-235ENST00000616973 CD2BP2O95400 341 aaKnown RBP19.25■□□□□ 0.67
NR1H3-235ENST00000616973 CHMLP26374 656 aa19.25■□□□□ 0.67
NR1H3-235ENST00000616973 NEURL1BA8MQ27 555 aa19.25■□□□□ 0.67
NR1H3-235ENST00000616973 EPB41L2O43491 1005 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms