RNA–Protein interactions for RNA: ENST00000614703.4

SNX9-202, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-202ENST00000614703 TJP1Q07157 1748 aa13.23□□□□□ -0.29
SNX9-202ENST00000614703 H0YIN7 160 aa13.23□□□□□ -0.29
SNX9-202ENST00000614703 USPL1Q5W0Q7 1092 aa13.23□□□□□ -0.29
SNX9-202ENST00000614703 INTS5Q6P9B9 1019 aaKnown RBP13.22□□□□□ -0.29
SNX9-202ENST00000614703 NARFQ9UHQ1 456 aa13.22□□□□□ -0.29
SNX9-202ENST00000614703 NRXN2Q9P2S2 1712 aa13.22□□□□□ -0.29
SNX9-202ENST00000614703 DICER1Q9UPY3 1922 aaKnown RBP13.21□□□□□ -0.29
SNX9-202ENST00000614703 SOS1Q07889 1333 aaPredicted RBP13.21□□□□□ -0.29
SNX9-202ENST00000614703 SERPINB2P05120 415 aa13.21□□□□□ -0.29
SNX9-202ENST00000614703 CHADLQ6NUI6 762 aa13.21□□□□□ -0.29
SNX9-202ENST00000614703 C2CD5Q86YS7 1000 aa13.21□□□□□ -0.29
SNX9-202ENST00000614703 AIDAQ96BJ3 306 aa13.21□□□□□ -0.29
SNX9-202ENST00000614703 PRDM10Q9NQV6 1147 aa13.21□□□□□ -0.29
SNX9-202ENST00000614703 SCN11AQ9UI33 1791 aa13.21□□□□□ -0.29
SNX9-202ENST00000614703 ADAMTS7Q9UKP4 1686 aa13.21□□□□□ -0.3
SNX9-202ENST00000614703 TNNT2P45379 298 aaPredicted RBP13.2□□□□□ -0.3
SNX9-202ENST00000614703 NFIXQ14938 502 aa13.2□□□□□ -0.3
SNX9-202ENST00000614703 COL15A1P39059 1388 aa13.2□□□□□ -0.3
SNX9-202ENST00000614703 ERFEQ4G0M1 354 aa13.19□□□□□ -0.3
SNX9-202ENST00000614703 IQCA1LA6NCM1 817 aa13.18□□□□□ -0.3
SNX9-202ENST00000614703 NFKBIEO00221 500 aa13.18□□□□□ -0.3
SNX9-202ENST00000614703 PDE6BP35913 854 aa13.18□□□□□ -0.3
SNX9-202ENST00000614703 CTCFP49711 727 aaPredicted RBP13.18□□□□□ -0.3
SNX9-202ENST00000614703 AKAP4Q5JQC9 854 aa13.18□□□□□ -0.3
SNX9-202ENST00000614703 DNAJC10Q8IXB1 793 aa13.18□□□□□ -0.3
SNX9-202ENST00000614703 MKRN1Q9UHC7 482 aaKnown RBP13.18□□□□□ -0.3
SNX9-202ENST00000614703 A0A087WZG4 1122 aa13.17□□□□□ -0.3
SNX9-202ENST00000614703 POTECB2RU33 542 aa13.17□□□□□ -0.3
SNX9-202ENST00000614703 CYP19A1P11511 503 aaPredicted RBP13.17□□□□□ -0.3
SNX9-202ENST00000614703 SOGA3Q5TF21 947 aa13.17□□□□□ -0.3
SNX9-202ENST00000614703 VSIG10Q8N0Z9 540 aa13.17□□□□□ -0.3
SNX9-202ENST00000614703 SLC52A2Q9HAB3 445 aa13.17□□□□□ -0.3
SNX9-202ENST00000614703 FER1L6Q2WGJ9 1857 aa13.16□□□□□ -0.3
SNX9-202ENST00000614703 LTBP3Q9NS15 1303 aa13.16□□□□□ -0.3
SNX9-202ENST00000614703 ZNF622Q969S3 477 aaKnown RBP eCLIP13.16□□□□□ -0.32e-11■□□□□ 9
SNX9-202ENST00000614703 CNTNAP1P78357 1384 aa13.16□□□□□ -0.3
SNX9-202ENST00000614703 STARD3NLO95772 234 aa13.15□□□□□ -0.3
SNX9-202ENST00000614703 SULT6B1Q6IMI4 303 aa13.15□□□□□ -0.3
SNX9-202ENST00000614703 BRIP1Q9BX63 1249 aa13.15□□□□□ -0.3
SNX9-202ENST00000614703 TAOK3Q9H2K8 898 aa13.15□□□□□ -0.3
SNX9-202ENST00000614703 SCN4AP35499 1836 aa13.15□□□□□ -0.3
SNX9-202ENST00000614703 FOXN1O15353 648 aa13.14□□□□□ -0.31
SNX9-202ENST00000614703 SLC34A2O95436 690 aa13.14□□□□□ -0.31
SNX9-202ENST00000614703 NPM2Q86SE8 214 aaKnown RBP13.14□□□□□ -0.31
SNX9-202ENST00000614703 LDHDQ86WU2 507 aa13.14□□□□□ -0.31
SNX9-202ENST00000614703 AEBP1Q8IUX7 1158 aa13.14□□□□□ -0.31
SNX9-202ENST00000614703 CNKSR1Q969H4 720 aa13.14□□□□□ -0.31
SNX9-202ENST00000614703 POLR3GLQ9BT43 218 aa13.14□□□□□ -0.31
SNX9-202ENST00000614703 ZBTB1Q9Y2K1 713 aa13.14□□□□□ -0.31
SNX9-202ENST00000614703 NPHP1O15259 732 aa13.13□□□□□ -0.31
SNX9-202ENST00000614703 C21orf2O43822 256 aa13.13□□□□□ -0.31
SNX9-202ENST00000614703 MORC1Q86VD1 984 aa13.13□□□□□ -0.31
SNX9-202ENST00000614703 BCL2L12Q9HB09 334 aa13.13□□□□□ -0.31
SNX9-202ENST00000614703 VIRMAQ69YN4 1812 aaKnown RBP13.13□□□□□ -0.31
SNX9-202ENST00000614703 MRC1P22897 1456 aa13.12□□□□□ -0.31
SNX9-202ENST00000614703 CARMIL3Q8ND23 1372 aa13.12□□□□□ -0.31
SNX9-202ENST00000614703 TMEM88BA6NKF7 163 aa13.12□□□□□ -0.31
SNX9-202ENST00000614703 BICDL1Q6ZP65 573 aa13.12□□□□□ -0.31
SNX9-202ENST00000614703 TTC5Q8N0Z6 440 aa13.12□□□□□ -0.31
SNX9-202ENST00000614703 TEX13AQ9BXU3 409 aaPredicted RBP13.12□□□□□ -0.31
SNX9-202ENST00000614703 ANKRD31Q8N7Z5 1873 aa13.11□□□□□ -0.31
SNX9-202ENST00000614703 RNMTO43148 476 aaKnown RBP13.11□□□□□ -0.31
SNX9-202ENST00000614703 DDNO94850 711 aaPredicted RBP13.11□□□□□ -0.31
SNX9-202ENST00000614703 CANXP27824 592 aaKnown RBP13.11□□□□□ -0.31
SNX9-202ENST00000614703 ST5P78524 1137 aa13.11□□□□□ -0.31
SNX9-202ENST00000614703 L3MBTL3Q96JM7 780 aaPredicted RBP13.11□□□□□ -0.31
SNX9-202ENST00000614703 PASKQ96RG2 1323 aa13.11□□□□□ -0.31
SNX9-202ENST00000614703 EIF5P55010 431 aaKnown RBP13.1□□□□□ -0.31
SNX9-202ENST00000614703 MAP2K1Q02750 393 aaPredicted RBP13.1□□□□□ -0.31
SNX9-202ENST00000614703 SLC39A6Q13433 755 aa13.1□□□□□ -0.31
SNX9-202ENST00000614703 STYK1Q6J9G0 422 aa13.1□□□□□ -0.31
SNX9-202ENST00000614703 WBP1LQ9NX94 342 aa13.1□□□□□ -0.31
SNX9-202ENST00000614703 ZNF219Q9P2Y4 722 aaPredicted RBP13.1□□□□□ -0.31
SNX9-202ENST00000614703 TIMELESSQ9UNS1 1208 aa13.1□□□□□ -0.31
SNX9-202ENST00000614703 ARFGEF2Q9Y6D5 1785 aa13.09□□□□□ -0.31
SNX9-202ENST00000614703 VEGFBP49765 207 aa13.09□□□□□ -0.31
SNX9-202ENST00000614703 PRR5LQ6MZQ0 368 aa13.09□□□□□ -0.31
SNX9-202ENST00000614703 CNBD1Q8NA66 436 aa13.09□□□□□ -0.31
SNX9-202ENST00000614703 MASTLQ96GX5 879 aa13.09□□□□□ -0.31
SNX9-202ENST00000614703 SETDB2Q96T68 719 aa13.09□□□□□ -0.31
SNX9-202ENST00000614703 TAF1DQ9H5J8 278 aaPredicted RBP13.09□□□□□ -0.31
SNX9-202ENST00000614703 LGR6Q9HBX8 967 aa13.09□□□□□ -0.31
SNX9-202ENST00000614703 UBR2Q8IWV8 1755 aa13.08□□□□□ -0.32
SNX9-202ENST00000614703 POTEIP0CG38 1075 aa13.08□□□□□ -0.32
SNX9-202ENST00000614703 POTEJP0CG39 1038 aa13.08□□□□□ -0.32
SNX9-202ENST00000614703 IL13P35225 146 aa13.08□□□□□ -0.32
SNX9-202ENST00000614703 LBX1P52954 281 aa13.08□□□□□ -0.32
SNX9-202ENST00000614703 TBC1D9BQ66K14 1250 aa13.08□□□□□ -0.32
SNX9-202ENST00000614703 PNMA8AQ86V59 439 aaPredicted RBP13.08□□□□□ -0.32
SNX9-202ENST00000614703 PANK3Q9H999 370 aa13.08□□□□□ -0.32
SNX9-202ENST00000614703 PCDH10Q9P2E7 1040 aa13.08□□□□□ -0.32
SNX9-202ENST00000614703 CLEC11AQ9Y240 323 aa13.08□□□□□ -0.32
SNX9-202ENST00000614703 SCN7AQ01118 1682 aa13.08□□□□□ -0.32
SNX9-202ENST00000614703 CACNA1SQ13698 1873 aa13.08□□□□□ -0.32
SNX9-202ENST00000614703 COL11A2P13942 1736 aaPredicted RBP13.08□□□□□ -0.32
SNX9-202ENST00000614703 IL6STP40189 918 aaPredicted RBP13.07□□□□□ -0.32
SNX9-202ENST00000614703 DEFB115Q30KQ5 88 aa13.07□□□□□ -0.32
SNX9-202ENST00000614703 CCDC93Q567U6 631 aa13.07□□□□□ -0.32
SNX9-202ENST00000614703 PRPF40BQ6NWY9 871 aaKnown RBP13.07□□□□□ -0.32
SNX9-202ENST00000614703 BEGAINQ9BUH8 593 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms