RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 ACSBG1Q96GR2 724 aa12.39□□□□□ -0.43
GGA3-221ENST00000614198 STK31Q9BXU1 1019 aa12.39□□□□□ -0.43
GGA3-221ENST00000614198 APBB1O00213 710 aa12.39□□□□□ -0.43
GGA3-221ENST00000614198 CCDC30Q5VVM6 783 aa12.39□□□□□ -0.43
GGA3-221ENST00000614198 NGLY1Q96IV0 654 aa12.39□□□□□ -0.43
GGA3-221ENST00000614198 DCAF5Q96JK2 942 aa12.39□□□□□ -0.43
GGA3-221ENST00000614198 DDX19BQ9UMR2 479 aa12.39□□□□□ -0.43
GGA3-221ENST00000614198 JARID2Q92833 1246 aaPredicted RBP12.38□□□□□ -0.43
GGA3-221ENST00000614198 ASAP1Q9ULH1 1129 aa12.38□□□□□ -0.43
GGA3-221ENST00000614198 KDM3BQ7LBC6 1761 aa12.38□□□□□ -0.43
GGA3-221ENST00000614198 SCN11AQ9UI33 1791 aa12.38□□□□□ -0.43
GGA3-221ENST00000614198 GOLGA6L3A6NEY3 463 aa12.38□□□□□ -0.43
GGA3-221ENST00000614198 FAM98CQ17RN3 349 aaKnown RBP12.38□□□□□ -0.43
GGA3-221ENST00000614198 BRPF1P55201 1214 aaPredicted RBP12.37□□□□□ -0.43
GGA3-221ENST00000614198 PTF1AQ7RTS3 328 aa12.37□□□□□ -0.43
GGA3-221ENST00000614198 SHANK3Q9BYB0 1731 aa12.37□□□□□ -0.43
GGA3-221ENST00000614198 PI4KAP2A4QPH2 592 aa12.37□□□□□ -0.43
GGA3-221ENST00000614198 PI4KAP1Q8N8J0 262 aa12.37□□□□□ -0.43
GGA3-221ENST00000614198 BECN1Q14457 450 aa12.37□□□□□ -0.43
GGA3-221ENST00000614198 PCDH11XQ9BZA7 1347 aa12.37□□□□□ -0.43
GGA3-221ENST00000614198 PCDH11YQ9BZA8 1340 aa12.37□□□□□ -0.43
GGA3-221ENST00000614198 SIPA1L3O60292 1781 aaPredicted RBP12.36□□□□□ -0.43
GGA3-221ENST00000614198 KCNQ4P56696 695 aa12.36□□□□□ -0.43
GGA3-221ENST00000614198 ZNF330Q9Y3S2 320 aaPredicted RBP12.36□□□□□ -0.43
GGA3-221ENST00000614198 C5P01031 1676 aa12.36□□□□□ -0.43
GGA3-221ENST00000614198 PDIA6Q15084 440 aa12.36□□□□□ -0.43
GGA3-221ENST00000614198 PIGBQ92521 554 aa12.36□□□□□ -0.43
GGA3-221ENST00000614198 ARHGAP45Q92619 1136 aa12.36□□□□□ -0.43
GGA3-221ENST00000614198 PKD1L3Q7Z443 1732 aa12.35□□□□□ -0.43
GGA3-221ENST00000614198 PLCH1Q4KWH8 1693 aa12.35□□□□□ -0.43
GGA3-221ENST00000614198 ANTXR1Q9H6X2 564 aa12.35□□□□□ -0.43
GGA3-221ENST00000614198 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.35□□□□□ -0.43
GGA3-221ENST00000614198 PDZRN3Q9UPQ7 1066 aa12.35□□□□□ -0.43
GGA3-221ENST00000614198 A1BGP04217 495 aa12.35□□□□□ -0.43
GGA3-221ENST00000614198 CWF19L2Q2TBE0 894 aaKnown RBP12.35□□□□□ -0.43
GGA3-221ENST00000614198 TTC5Q8N0Z6 440 aa12.35□□□□□ -0.43
GGA3-221ENST00000614198 API5Q9BZZ5 524 aaKnown RBP12.35□□□□□ -0.43
GGA3-221ENST00000614198 LRP6O75581 1613 aa12.35□□□□□ -0.43
GGA3-221ENST00000614198 KCNQ2O43526 872 aa12.34□□□□□ -0.43
GGA3-221ENST00000614198 TOGARAM1Q9Y4F4 1720 aa12.34□□□□□ -0.43
GGA3-221ENST00000614198 COL22A1Q8NFW1 1626 aaPredicted RBP12.34□□□□□ -0.43
GGA3-221ENST00000614198 SPATA31A1Q5TZJ5 1347 aa12.34□□□□□ -0.43
GGA3-221ENST00000614198 PRIM1P49642 420 aaKnown RBP12.34□□□□□ -0.43
GGA3-221ENST00000614198 COL14A1Q05707 1796 aaKnown RBP12.34□□□□□ -0.43
GGA3-221ENST00000614198 EXOC5O00471 708 aa12.33□□□□□ -0.44
GGA3-221ENST00000614198 NBPF7P0C2Y1 421 aaPredicted RBP12.33□□□□□ -0.44
GGA3-221ENST00000614198 INTS3Q68E01 1043 aaKnown RBP12.33□□□□□ -0.44
GGA3-221ENST00000614198 SMIM5Q71RC9 77 aa12.33□□□□□ -0.44
GGA3-221ENST00000614198 RBM42Q9BTD8 480 aaKnown RBP12.33□□□□□ -0.44
GGA3-221ENST00000614198 PANK2Q9BZ23 570 aa12.33□□□□□ -0.44
GGA3-221ENST00000614198 PDCL3Q9H2J4 239 aa12.33□□□□□ -0.44
GGA3-221ENST00000614198 UPF2Q9HAU5 1272 aaKnown RBP12.33□□□□□ -0.44
GGA3-221ENST00000614198 PARP4Q9UKK3 1724 aaKnown RBP12.33□□□□□ -0.44
GGA3-221ENST00000614198 AAMPQ13685 434 aa12.33□□□□□ -0.44
GGA3-221ENST00000614198 MARCH10Q8NA82 808 aaPredicted RBP12.33□□□□□ -0.44
GGA3-221ENST00000614198 LNPKQ9C0E8 428 aa12.33□□□□□ -0.44
GGA3-221ENST00000614198 MAP3K2Q9Y2U5 619 aa12.33□□□□□ -0.44
GGA3-221ENST00000614198 HEG1Q9ULI3 1381 aa12.32□□□□□ -0.44
GGA3-221ENST00000614198 TPM2P07951 284 aa12.32□□□□□ -0.44
GGA3-221ENST00000614198 BCL11BQ9C0K0 894 aaPredicted RBP12.32□□□□□ -0.44
GGA3-221ENST00000614198 ADCY9O60503 1353 aa12.32□□□□□ -0.44
GGA3-221ENST00000614198 FGD1P98174 961 aa12.32□□□□□ -0.44
GGA3-221ENST00000614198 COPS6Q7L5N1 327 aa12.32□□□□□ -0.44
GGA3-221ENST00000614198 ADAMTS7Q9UKP4 1686 aa12.32□□□□□ -0.44
GGA3-221ENST00000614198 PTPRCP08575 1304 aa12.32□□□□□ -0.44
GGA3-221ENST00000614198 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
GGA3-221ENST00000614198 SMARCA5O60264 1052 aaPredicted RBP12.31□□□□□ -0.44
GGA3-221ENST00000614198 NBPF14Q5TI25 921 aa12.31□□□□□ -0.44
GGA3-221ENST00000614198 NBPF10Q6P3W6 841 aaKnown RBP12.31□□□□□ -0.44
GGA3-221ENST00000614198 C16orf71Q8IYS4 520 aaPredicted RBP12.31□□□□□ -0.44
GGA3-221ENST00000614198 NBPF15Q8N660 670 aa12.31□□□□□ -0.44
GGA3-221ENST00000614198 XAGE3Q8WTP9 111 aa12.31□□□□□ -0.44
GGA3-221ENST00000614198 SLC4A9Q96Q91 983 aa12.31□□□□□ -0.44
GGA3-221ENST00000614198 RWDD1Q9H446 243 aaPredicted RBP12.31□□□□□ -0.44
GGA3-221ENST00000614198 TMOD3Q9NYL9 352 aa12.31□□□□□ -0.44
GGA3-221ENST00000614198 MRE11P49959 708 aa12.31□□□□□ -0.44
GGA3-221ENST00000614198 DDB1Q16531 1140 aa12.31□□□□□ -0.44
GGA3-221ENST00000614198 ARID3AQ99856 593 aa12.31□□□□□ -0.44
GGA3-221ENST00000614198 USP44Q9H0E7 712 aa12.31□□□□□ -0.44
GGA3-221ENST00000614198 ABCC6O95255 1503 aa12.31□□□□□ -0.44
GGA3-221ENST00000614198 BCL9LQ86UU0 1499 aa12.31□□□□□ -0.44
GGA3-221ENST00000614198 PNMA6EA0A0J9YXQ4 647 aa12.3□□□□□ -0.44
GGA3-221ENST00000614198 ESPNB1AK53 854 aa12.3□□□□□ -0.44
GGA3-221ENST00000614198 ATG3Q9NT62 314 aa12.3□□□□□ -0.44
GGA3-221ENST00000614198 BABAM1Q9NWV8 329 aa12.3□□□□□ -0.44
GGA3-221ENST00000614198 DBF4Q9UBU7 674 aaPredicted RBP12.3□□□□□ -0.44
GGA3-221ENST00000614198 SPATA31A5Q5VU36 1347 aa12.3□□□□□ -0.44
GGA3-221ENST00000614198 SPATA31A7Q8IWB4 1347 aa12.3□□□□□ -0.44
GGA3-221ENST00000614198 ATP5J2-PTCD1G3V325 749 aa12.3□□□□□ -0.44
GGA3-221ENST00000614198 FMNL2Q96PY5 1086 aa12.3□□□□□ -0.44
GGA3-221ENST00000614198 LRRFIP2Q9Y608 721 aaKnown RBP12.3□□□□□ -0.44
GGA3-221ENST00000614198 DISP2A7MBM2 1401 aa12.3□□□□□ -0.44
GGA3-221ENST00000614198 ANKRD45Q5TZF3 282 aa12.3□□□□□ -0.44
GGA3-221ENST00000614198 MEX3CQ5U5Q3 659 aaKnown RBP12.3□□□□□ -0.44
GGA3-221ENST00000614198 USP21Q9UK80 565 aa12.3□□□□□ -0.44
GGA3-221ENST00000614198 NKX1-1Q15270 411 aaPredicted RBP12.29□□□□□ -0.44
GGA3-221ENST00000614198 TTLL7Q6ZT98 887 aa12.29□□□□□ -0.44
GGA3-221ENST00000614198 UNC5CLQ8IV45 518 aa12.29□□□□□ -0.44
GGA3-221ENST00000614198 DNAJC10Q8IXB1 793 aa12.29□□□□□ -0.44
GGA3-221ENST00000614198 OTUD7AQ8TE49 926 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms