RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 DBF4Q9UBU7 674 aaPredicted RBP24.26■■□□□ 1.47
SMARCD2-212ENST00000613943 RGPD5Q99666 1765 aa24.26■■□□□ 1.47
SMARCD2-212ENST00000613943 AIMP1Q12904 312 aaKnown RBP24.26■■□□□ 1.47
SMARCD2-212ENST00000613943 IL25Q9H293 177 aa24.26■■□□□ 1.47
SMARCD2-212ENST00000613943 NCAPD2Q15021 1401 aa24.25■■□□□ 1.47
SMARCD2-212ENST00000613943 POLA2Q14181 598 aa24.24■■□□□ 1.47
SMARCD2-212ENST00000613943 ESYT1Q9BSJ8 1104 aa24.24■■□□□ 1.47
SMARCD2-212ENST00000613943 RHPN1Q8TCX5 695 aa24.23■■□□□ 1.47
SMARCD2-212ENST00000613943 CHMLP26374 656 aa24.23■■□□□ 1.47
SMARCD2-212ENST00000613943 PALD1Q9ULE6 856 aa24.23■■□□□ 1.47
SMARCD2-212ENST00000613943 CIZ1Q9ULV3 898 aaPredicted RBP24.23■■□□□ 1.47
SMARCD2-212ENST00000613943 HSPA2P54652 639 aa24.22■■□□□ 1.47
SMARCD2-212ENST00000613943 PKP1Q13835 747 aa24.22■■□□□ 1.47
SMARCD2-212ENST00000613943 RAPGEF4Q8WZA2 1011 aa24.22■■□□□ 1.47
SMARCD2-212ENST00000613943 ANO2Q9NQ90 1003 aa24.22■■□□□ 1.47
SMARCD2-212ENST00000613943 CSB-PGBD3P0DP91 1061 aa24.21■■□□□ 1.47
SMARCD2-212ENST00000613943 ZGPATQ8N5A5 531 aaKnown RBP24.21■■□□□ 1.47
SMARCD2-212ENST00000613943 STAP2Q9UGK3 403 aa24.21■■□□□ 1.47
SMARCD2-212ENST00000613943 MST1RQ04912 1400 aa24.21■■□□□ 1.47
SMARCD2-212ENST00000613943 N4BP2Q86UW6 1770 aaPredicted RBP24.21■■□□□ 1.47
SMARCD2-212ENST00000613943 PIP4K2AP48426 406 aaPredicted RBP24.21■■□□□ 1.47
SMARCD2-212ENST00000613943 DDX11L8A8MPP1 907 aa24.2■■□□□ 1.46
SMARCD2-212ENST00000613943 NFATC2IPQ8NCF5 419 aa24.2■■□□□ 1.46
SMARCD2-212ENST00000613943 C9orf78Q9NZ63 289 aaPredicted RBP24.2■■□□□ 1.46
SMARCD2-212ENST00000613943 PA2G4Q9UQ80 394 aaKnown RBP24.2■■□□□ 1.46
SMARCD2-212ENST00000613943 EIF5BO60841 1220 aaKnown RBP24.19■■□□□ 1.46
SMARCD2-212ENST00000613943 MYL6BP14649 208 aa24.19■■□□□ 1.46
SMARCD2-212ENST00000613943 HEG1Q9ULI3 1381 aa24.18■■□□□ 1.46
SMARCD2-212ENST00000613943 NOL8Q76FK4 1167 aaKnown RBP24.18■■□□□ 1.46
SMARCD2-212ENST00000613943 ST18O60284 1047 aa24.18■■□□□ 1.46
SMARCD2-212ENST00000613943 OS9Q13438 667 aaPredicted RBP24.18■■□□□ 1.46
SMARCD2-212ENST00000613943 KSR2Q6VAB6 950 aa24.18■■□□□ 1.46
SMARCD2-212ENST00000613943 PI4K2BQ8TCG2 481 aa24.18■■□□□ 1.46
SMARCD2-212ENST00000613943 MEGF6O75095 1541 aa24.17■■□□□ 1.46
SMARCD2-212ENST00000613943 KDM6AO15550 1401 aaPredicted RBP24.17■■□□□ 1.46
SMARCD2-212ENST00000613943 RAB11FIP3O75154 756 aa24.17■■□□□ 1.46
SMARCD2-212ENST00000613943 NEK4P51957 841 aa24.17■■□□□ 1.46
SMARCD2-212ENST00000613943 ZNF790Q6PG37 636 aa24.17■■□□□ 1.46
SMARCD2-212ENST00000613943 GBP4Q96PP9 640 aa24.17■■□□□ 1.46
SMARCD2-212ENST00000613943 AK9Q5TCS8 1911 aa24.16■■□□□ 1.46
SMARCD2-212ENST00000613943 NPHP3Q7Z494 1330 aa24.16■■□□□ 1.46
SMARCD2-212ENST00000613943 PDIA6Q15084 440 aa24.16■■□□□ 1.46
SMARCD2-212ENST00000613943 KIF1BPQ96EK5 621 aa24.16■■□□□ 1.46
SMARCD2-212ENST00000613943 TUBGCP6Q96RT7 1819 aa24.15■■□□□ 1.46
SMARCD2-212ENST00000613943 PHKG2P15735 406 aa24.15■■□□□ 1.46
SMARCD2-212ENST00000613943 KIF1AQ12756 1690 aa24.15■■□□□ 1.46
SMARCD2-212ENST00000613943 ALS2Q96Q42 1657 aa24.15■■□□□ 1.46
SMARCD2-212ENST00000613943 TATP17735 454 aaPredicted RBP24.15■■□□□ 1.46
SMARCD2-212ENST00000613943 SLC52A2Q9HAB3 445 aa24.15■■□□□ 1.46
SMARCD2-212ENST00000613943 CAMTA1Q9Y6Y1 1673 aa24.14■■□□□ 1.46
SMARCD2-212ENST00000613943 STRCP1A6NGW2 1772 aa24.14■■□□□ 1.46
SMARCD2-212ENST00000613943 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.13■■□□□ 1.45
SMARCD2-212ENST00000613943 SUCLG2Q96I99 432 aa24.13■■□□□ 1.45
SMARCD2-212ENST00000613943 ZNF496Q96IT1 587 aaPredicted RBP24.13■■□□□ 1.45
SMARCD2-212ENST00000613943 CHMP4AQ9BY43 222 aa24.13■■□□□ 1.45
SMARCD2-212ENST00000613943 OVOS2A0A0G2JMS6 1433 aa24.13■■□□□ 1.45
SMARCD2-212ENST00000613943 GOLGA6L3A6NEY3 463 aa24.12■■□□□ 1.45
SMARCD2-212ENST00000613943 CHAMP1Q96JM3 812 aa24.12■■□□□ 1.45
SMARCD2-212ENST00000613943 UPF3BQ9BZI7 483 aaKnown RBP24.12■■□□□ 1.45
SMARCD2-212ENST00000613943 HYPKQ9NX55 129 aa24.12■■□□□ 1.45
SMARCD2-212ENST00000613943 KAZALD1Q96I82 304 aa24.12■■□□□ 1.45
SMARCD2-212ENST00000613943 PANK2Q9BZ23 570 aa24.12■■□□□ 1.45
SMARCD2-212ENST00000613943 DDX21Q9NR30 783 aaKnown RBP eCLIP24.12■■□□□ 1.45
SMARCD2-212ENST00000613943 CYP27B1O15528 508 aa24.11■■□□□ 1.45
SMARCD2-212ENST00000613943 JARID2Q92833 1246 aaPredicted RBP24.11■■□□□ 1.45
SMARCD2-212ENST00000613943 XRCC6P12956 609 aaKnown RBP eCLIP24.11■■□□□ 1.45
SMARCD2-212ENST00000613943 BICC1Q9H694 974 aaKnown RBP24.11■■□□□ 1.45
SMARCD2-212ENST00000613943 BAG4O95429 457 aaKnown RBP24.1■■□□□ 1.45
SMARCD2-212ENST00000613943 FOXD4L5Q5VV16 416 aaPredicted RBP24.1■■□□□ 1.45
SMARCD2-212ENST00000613943 RIC3Q7Z5B4 369 aa24.1■■□□□ 1.45
SMARCD2-212ENST00000613943 FOXD4L4Q8WXT5 416 aaPredicted RBP24.1■■□□□ 1.45
SMARCD2-212ENST00000613943 FSD2A1L4K1 749 aa24.1■■□□□ 1.45
SMARCD2-212ENST00000613943 ALDH1L1O75891 902 aa24.1■■□□□ 1.45
SMARCD2-212ENST00000613943 IGKV5-2P06315 115 aa24.1■■□□□ 1.45
SMARCD2-212ENST00000613943 USP16Q9Y5T5 823 aa24.1■■□□□ 1.45
SMARCD2-212ENST00000613943 GRM8O00222 908 aa24.09■■□□□ 1.45
SMARCD2-212ENST00000613943 KLHDC4Q8TBB5 520 aa24.09■■□□□ 1.45
SMARCD2-212ENST00000613943 XAGE3Q8WTP9 111 aa24.09■■□□□ 1.45
SMARCD2-212ENST00000613943 SPG7Q9UQ90 795 aa24.09■■□□□ 1.45
SMARCD2-212ENST00000613943 AOX1Q06278 1338 aa24.09■■□□□ 1.45
SMARCD2-212ENST00000613943 TMX3Q96JJ7 454 aa24.09■■□□□ 1.45
SMARCD2-212ENST00000613943 SIPA1L3O60292 1781 aaPredicted RBP24.08■■□□□ 1.45
SMARCD2-212ENST00000613943 COPS6Q7L5N1 327 aa24.08■■□□□ 1.45
SMARCD2-212ENST00000613943 IFNL2Q8IZJ0 200 aa24.08■■□□□ 1.45
SMARCD2-212ENST00000613943 LINS1Q8NG48 757 aa24.08■■□□□ 1.45
SMARCD2-212ENST00000613943 SIL1Q9H173 461 aa24.08■■□□□ 1.45
SMARCD2-212ENST00000613943 MTX1Q13505 466 aa24.07■■□□□ 1.44
SMARCD2-212ENST00000613943 CWC27Q6UX04 472 aaKnown RBP24.07■■□□□ 1.44
SMARCD2-212ENST00000613943 CADPS2Q86UW7 1296 aa24.07■■□□□ 1.44
SMARCD2-212ENST00000613943 MCCP23508 829 aa24.07■■□□□ 1.44
SMARCD2-212ENST00000613943 L1TD1Q5T7N2 865 aaKnown RBP24.07■■□□□ 1.44
SMARCD2-212ENST00000613943 MCTP1Q6DN14 999 aa24.07■■□□□ 1.44
SMARCD2-212ENST00000613943 TNS3Q68CZ2 1445 aa24.06■■□□□ 1.44
SMARCD2-212ENST00000613943 DDX58O95786 925 aaKnown RBP24.06■■□□□ 1.44
SMARCD2-212ENST00000613943 CLASRPQ8N2M8 674 aaKnown RBP24.06■■□□□ 1.44
SMARCD2-212ENST00000613943 MYD88Q99836 296 aa24.06■■□□□ 1.44
SMARCD2-212ENST00000613943 CYP2E1P05181 493 aaPredicted RBP24.05■■□□□ 1.44
SMARCD2-212ENST00000613943 ZDHHC9Q9Y397 364 aa24.05■■□□□ 1.44
SMARCD2-212ENST00000613943 C5P01031 1676 aa24.05■■□□□ 1.44
SMARCD2-212ENST00000613943 HSP90AB4PQ58FF6 505 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms