RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 CDCA7Q9BWT1 371 aaPredicted RBP27.03■■□□□ 1.92
POLR2J3-220ENST00000613744 DDX19BQ9UMR2 479 aa27.03■■□□□ 1.92
POLR2J3-220ENST00000613744 DLG5Q8TDM6 1919 aa27.03■■□□□ 1.92
POLR2J3-220ENST00000613744 FTSJ3Q8IY81 847 aaKnown RBP27.02■■□□□ 1.92
POLR2J3-220ENST00000613744 SEPT12Q8IYM1 358 aa27.02■■□□□ 1.92
POLR2J3-220ENST00000613744 RXRBP28702 533 aa27.02■■□□□ 1.92
POLR2J3-220ENST00000613744 MCM10Q7L590 875 aa27.02■■□□□ 1.92
POLR2J3-220ENST00000613744 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.02■■□□□ 1.92
POLR2J3-220ENST00000613744 KIF16BQ96L93 1317 aa27.02■■□□□ 1.92
POLR2J3-220ENST00000613744 MPRIPQ6WCQ1 1025 aa27.01■■□□□ 1.91
POLR2J3-220ENST00000613744 PKD1L3Q7Z443 1732 aa27.01■■□□□ 1.91
POLR2J3-220ENST00000613744 ZNF500O60304 480 aaPredicted RBP27.01■■□□□ 1.91
POLR2J3-220ENST00000613744 PHKG2P15735 406 aa27.01■■□□□ 1.91
POLR2J3-220ENST00000613744 GNAT3A8MTJ3 354 aa27■■□□□ 1.91
POLR2J3-220ENST00000613744 PCDH11XQ9BZA7 1347 aa27■■□□□ 1.91
POLR2J3-220ENST00000613744 PCDH11YQ9BZA8 1340 aa27■■□□□ 1.91
POLR2J3-220ENST00000613744 LRRC37A3O60309 1634 aa26.99■■□□□ 1.91
POLR2J3-220ENST00000613744 ZNF445P59923 1031 aa26.99■■□□□ 1.91
POLR2J3-220ENST00000613744 AKAP4Q5JQC9 854 aa26.99■■□□□ 1.91
POLR2J3-220ENST00000613744 FAM182BQ5T319 152 aa26.99■■□□□ 1.91
POLR2J3-220ENST00000613744 IFNL2Q8IZJ0 200 aa26.99■■□□□ 1.91
POLR2J3-220ENST00000613744 PRDM4Q9UKN5 801 aa26.99■■□□□ 1.91
POLR2J3-220ENST00000613744 SHANK3Q9BYB0 1731 aa26.99■■□□□ 1.91
POLR2J3-220ENST00000613744 LGR6Q9HBX8 967 aa26.99■■□□□ 1.91
POLR2J3-220ENST00000613744 MAP3K5Q99683 1374 aa26.98■■□□□ 1.91
POLR2J3-220ENST00000613744 ONECUT3O60422 494 aaPredicted RBP26.98■■□□□ 1.91
POLR2J3-220ENST00000613744 TNS2Q63HR2 1409 aa26.98■■□□□ 1.91
POLR2J3-220ENST00000613744 RTF1Q92541 710 aaKnown RBP26.97■■□□□ 1.91
POLR2J3-220ENST00000613744 THSD7AQ9UPZ6 1657 aa26.96■■□□□ 1.91
POLR2J3-220ENST00000613744 MCM5P33992 734 aa26.96■■□□□ 1.91
POLR2J3-220ENST00000613744 MARCH10Q8NA82 808 aaPredicted RBP26.96■■□□□ 1.91
POLR2J3-220ENST00000613744 K7ELQ4 463 aaPredicted RBP26.96■■□□□ 1.91
POLR2J3-220ENST00000613744 IL17REQ8NFR9 667 aa26.96■■□□□ 1.91
POLR2J3-220ENST00000613744 NOL7Q9UMY1 257 aaKnown RBP26.96■■□□□ 1.91
POLR2J3-220ENST00000613744 CSPP1Q1MSJ5 1256 aa26.94■■□□□ 1.9
POLR2J3-220ENST00000613744 SMAP1Q8IYB5 467 aaPredicted RBP26.94■■□□□ 1.9
POLR2J3-220ENST00000613744 NUCB1Q02818 461 aa26.94■■□□□ 1.9
POLR2J3-220ENST00000613744 LMOD3Q0VAK6 560 aa26.94■■□□□ 1.9
POLR2J3-220ENST00000613744 BCL2L13Q9BXK5 485 aa26.94■■□□□ 1.9
POLR2J3-220ENST00000613744 BMP2KLQ5H9B9 411 aa26.93■■□□□ 1.9
POLR2J3-220ENST00000613744 PDLIM2Q96JY6 352 aa26.92■■□□□ 1.9
POLR2J3-220ENST00000613744 DYNC1I1O14576 645 aa26.91■■□□□ 1.9
POLR2J3-220ENST00000613744 PLEKHG2Q9H7P9 1386 aa26.91■■□□□ 1.9
POLR2J3-220ENST00000613744 RNMTO43148 476 aaKnown RBP26.91■■□□□ 1.9
POLR2J3-220ENST00000613744 KIF2CQ99661 725 aa26.91■■□□□ 1.9
POLR2J3-220ENST00000613744 KDM6AO15550 1401 aaPredicted RBP26.91■■□□□ 1.9
POLR2J3-220ENST00000613744 DDX49Q9Y6V7 483 aaKnown RBP26.89■■□□□ 1.9
POLR2J3-220ENST00000613744 RGS12O14924 1447 aa26.88■■□□□ 1.89
POLR2J3-220ENST00000613744 TSR2Q969E8 191 aaKnown RBP26.88■■□□□ 1.89
POLR2J3-220ENST00000613744 DCAF5Q96JK2 942 aa26.88■■□□□ 1.89
POLR2J3-220ENST00000613744 KAT6BQ8WYB5 2073 aa26.88■■□□□ 1.89
POLR2J3-220ENST00000613744 BRWD3Q6RI45 1802 aa26.88■■□□□ 1.89
POLR2J3-220ENST00000613744 EP400Q96L91 3159 aa26.88■■□□□ 1.89
POLR2J3-220ENST00000613744 HTATSF1O43719 755 aaKnown RBP26.88■■□□□ 1.89
POLR2J3-220ENST00000613744 BAG4O95429 457 aaKnown RBP26.88■■□□□ 1.89
POLR2J3-220ENST00000613744 ATF7IPQ6VMQ6 1270 aa26.88■■□□□ 1.89
POLR2J3-220ENST00000613744 ACSBG1Q96GR2 724 aa26.88■■□□□ 1.89
POLR2J3-220ENST00000613744 TRIM27P14373 513 aa26.87■■□□□ 1.89
POLR2J3-220ENST00000613744 MIS18AQ9NYP9 233 aa26.87■■□□□ 1.89
POLR2J3-220ENST00000613744 NKX1-1Q15270 411 aaPredicted RBP26.86■■□□□ 1.89
POLR2J3-220ENST00000613744 ZBTB40Q9NUA8 1239 aa26.86■■□□□ 1.89
POLR2J3-220ENST00000613744 KRT27Q7Z3Y8 459 aa26.86■■□□□ 1.89
POLR2J3-220ENST00000613744 SYTL4Q96C24 671 aaPredicted RBP26.85■■□□□ 1.89
POLR2J3-220ENST00000613744 SMC4Q9NTJ3 1288 aa26.85■■□□□ 1.89
POLR2J3-220ENST00000613744 R3HCC1Q9Y3T6 440 aaKnown RBP26.85■■□□□ 1.89
POLR2J3-220ENST00000613744 NUCB2P80303 420 aa26.85■■□□□ 1.89
POLR2J3-220ENST00000613744 NFATC2IPQ8NCF5 419 aa26.85■■□□□ 1.89
POLR2J3-220ENST00000613744 CFAP44Q96MT7 982 aa26.85■■□□□ 1.89
POLR2J3-220ENST00000613744 CEMIPQ8WUJ3 1361 aa26.84■■□□□ 1.89
POLR2J3-220ENST00000613744 SSFA2P28290 1259 aa26.84■■□□□ 1.89
POLR2J3-220ENST00000613744 TEFQ10587 303 aa26.84■■□□□ 1.89
POLR2J3-220ENST00000613744 ITPRIPQ8IWB1 547 aa26.84■■□□□ 1.89
POLR2J3-220ENST00000613744 CHD1LQ86WJ1 897 aa26.83■■□□□ 1.89
POLR2J3-220ENST00000613744 PODXL2Q9NZ53 605 aa26.83■■□□□ 1.89
POLR2J3-220ENST00000613744 IL16Q14005 1332 aa26.83■■□□□ 1.89
POLR2J3-220ENST00000613744 SCN11AQ9UI33 1791 aa26.83■■□□□ 1.89
POLR2J3-220ENST00000613744 CABP4P57796 275 aa26.82■■□□□ 1.88
POLR2J3-220ENST00000613744 RBM10P98175 930 aaKnown RBP26.82■■□□□ 1.88
POLR2J3-220ENST00000613744 ZKSCAN5Q9Y2L8 839 aa26.82■■□□□ 1.88
POLR2J3-220ENST00000613744 UQCRHLA0A096LP55 91 aa26.81■■□□□ 1.88
POLR2J3-220ENST00000613744 IPO8O15397 1037 aaKnown RBP26.81■■□□□ 1.88
POLR2J3-220ENST00000613744 UQCRHP07919 91 aa26.81■■□□□ 1.88
POLR2J3-220ENST00000613744 FAM13BQ9NYF5 915 aa26.81■■□□□ 1.88
POLR2J3-220ENST00000613744 TOGARAM1Q9Y4F4 1720 aa26.81■■□□□ 1.88
POLR2J3-220ENST00000613744 PRIM1P49642 420 aaKnown RBP26.81■■□□□ 1.88
POLR2J3-220ENST00000613744 KCNQ2O43526 872 aa26.8■■□□□ 1.88
POLR2J3-220ENST00000613744 CHMP4BQ9H444 224 aaKnown RBP26.8■■□□□ 1.88
POLR2J3-220ENST00000613744 SLC52A2Q9HAB3 445 aa26.8■■□□□ 1.88
POLR2J3-220ENST00000613744 SASS6Q6UVJ0 657 aa26.79■■□□□ 1.88
POLR2J3-220ENST00000613744 ZSCAN23Q3MJ62 389 aa26.78■■□□□ 1.88
POLR2J3-220ENST00000613744 GCC1Q96CN9 775 aa26.78■■□□□ 1.88
POLR2J3-220ENST00000613744 IFT57Q9NWB7 429 aa26.78■■□□□ 1.88
POLR2J3-220ENST00000613744 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.78■■□□□ 1.88
POLR2J3-220ENST00000613744 GNAI1P63096 354 aa26.78■■□□□ 1.88
POLR2J3-220ENST00000613744 TAF7Q15545 349 aaPredicted RBP26.78■■□□□ 1.88
POLR2J3-220ENST00000613744 PTF1AQ7RTS3 328 aa26.78■■□□□ 1.88
POLR2J3-220ENST00000613744 DOT1LQ8TEK3 1739 aa26.78■■□□□ 1.88
POLR2J3-220ENST00000613744 ADAMTS7Q9UKP4 1686 aa26.78■■□□□ 1.88
POLR2J3-220ENST00000613744 ERVV-2B6SEH9 535 aa26.77■■□□□ 1.88
POLR2J3-220ENST00000613744 SLC39A6Q13433 755 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms