RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 UVSSAQ2YD98 709 aa20.21■□□□□ 0.83
HMGXB3-206ENST00000613459 DDX11Q96FC9 970 aa20.21■□□□□ 0.83
HMGXB3-206ENST00000613459 MAP2K1Q02750 393 aaPredicted RBP20.2■□□□□ 0.82
HMGXB3-206ENST00000613459 DYDC1Q8WWB3 177 aa20.2■□□□□ 0.82
HMGXB3-206ENST00000613459 HYPKQ9NX55 129 aa20.2■□□□□ 0.82
HMGXB3-206ENST00000613459 MAP3K1Q13233 1512 aa20.2■□□□□ 0.82
HMGXB3-206ENST00000613459 CBX1P83916 185 aa20.2■□□□□ 0.82
HMGXB3-206ENST00000613459 SF3B2Q13435 895 aaKnown RBP20.2■□□□□ 0.82
HMGXB3-206ENST00000613459 NAPBQ9H115 298 aa20.2■□□□□ 0.82
HMGXB3-206ENST00000613459 CAMK4Q16566 473 aa20.2■□□□□ 0.82
HMGXB3-206ENST00000613459 SLF2Q8IX21 1173 aa20.2■□□□□ 0.82
HMGXB3-206ENST00000613459 CLIP2Q9UDT6 1046 aa20.2■□□□□ 0.82
HMGXB3-206ENST00000613459 KIAA0586Q9BVV6 1533 aa20.2■□□□□ 0.82
HMGXB3-206ENST00000613459 EHMT1Q9H9B1 1298 aa20.19■□□□□ 0.82
HMGXB3-206ENST00000613459 ZSCAN29Q8IWY8 852 aaPredicted RBP20.19■□□□□ 0.82
HMGXB3-206ENST00000613459 YEATS4O95619 227 aa20.19■□□□□ 0.82
HMGXB3-206ENST00000613459 IQCA1Q86XH1 822 aa20.19■□□□□ 0.82
HMGXB3-206ENST00000613459 EVI5LQ96CN4 794 aa20.19■□□□□ 0.82
HMGXB3-206ENST00000613459 IL16Q14005 1332 aa20.18■□□□□ 0.82
HMGXB3-206ENST00000613459 SSH1Q8WYL5 1049 aa20.18■□□□□ 0.82
HMGXB3-206ENST00000613459 NEBLO76041 1014 aa20.18■□□□□ 0.82
HMGXB3-206ENST00000613459 DNMBPQ6XZF7 1577 aa20.18■□□□□ 0.82
HMGXB3-206ENST00000613459 TTC21BQ7Z4L5 1316 aa20.18■□□□□ 0.82
HMGXB3-206ENST00000613459 SLC5A1P13866 664 aa20.18■□□□□ 0.82
HMGXB3-206ENST00000613459 PAFAH1B1P43034 410 aa20.18■□□□□ 0.82
HMGXB3-206ENST00000613459 KANK3Q6NY19 840 aa20.17■□□□□ 0.82
HMGXB3-206ENST00000613459 PPP4R3AQ6IN85 833 aa20.17■□□□□ 0.82
HMGXB3-206ENST00000613459 CACNA2D4Q7Z3S7 1137 aa20.17■□□□□ 0.82
HMGXB3-206ENST00000613459 STK11IPQ8N1F8 1099 aa20.17■□□□□ 0.82
HMGXB3-206ENST00000613459 CCDC12Q8WUD4 166 aaPredicted RBP20.17■□□□□ 0.82
HMGXB3-206ENST00000613459 HMG20BQ9P0W2 317 aa20.17■□□□□ 0.82
HMGXB3-206ENST00000613459 SSRP1Q08945 709 aaKnown RBP20.17■□□□□ 0.82
HMGXB3-206ENST00000613459 A0A087WZG4 1122 aa20.16■□□□□ 0.82
HMGXB3-206ENST00000613459 GCOM1H8Y6P7 765 aaPredicted RBP20.16■□□□□ 0.82
HMGXB3-206ENST00000613459 MYZAPP0CAP1 466 aa20.16■□□□□ 0.82
HMGXB3-206ENST00000613459 TTF1Q15361 905 aaPredicted RBP20.16■□□□□ 0.82
HMGXB3-206ENST00000613459 DNAAF4Q8WXU2 420 aa20.16■□□□□ 0.82
HMGXB3-206ENST00000613459 FAM135AQ9P2D6 1515 aa20.16■□□□□ 0.82
HMGXB3-206ENST00000613459 USP5P45974 858 aa20.16■□□□□ 0.82
HMGXB3-206ENST00000613459 STX1AQ16623 288 aa20.16■□□□□ 0.82
HMGXB3-206ENST00000613459 NAA15Q9BXJ9 866 aaKnown RBP20.16■□□□□ 0.82
HMGXB3-206ENST00000613459 SLC12A7Q9Y666 1083 aa20.16■□□□□ 0.82
HMGXB3-206ENST00000613459 URI1O94763 535 aaPredicted RBP20.16■□□□□ 0.82
HMGXB3-206ENST00000613459 MATR3P43243 847 aaKnown RBP eCLIP20.16■□□□□ 0.82
HMGXB3-206ENST00000613459 KIF4BQ2VIQ3 1234 aa20.16■□□□□ 0.82
HMGXB3-206ENST00000613459 BMP2KLQ5H9B9 411 aa20.16■□□□□ 0.82
HMGXB3-206ENST00000613459 FAM114A1Q8IWE2 563 aa20.16■□□□□ 0.82
HMGXB3-206ENST00000613459 CDK13Q14004 1512 aaKnown RBP20.15■□□□□ 0.82
HMGXB3-206ENST00000613459 CLCN1P35523 988 aa20.15■□□□□ 0.82
HMGXB3-206ENST00000613459 ZNF213O14771 459 aa20.15■□□□□ 0.82
HMGXB3-206ENST00000613459 TNNT1P13805 278 aa20.15■□□□□ 0.82
HMGXB3-206ENST00000613459 AMPD3Q01432 767 aa20.15■□□□□ 0.82
HMGXB3-206ENST00000613459 LRRC27Q9C0I9 530 aa20.15■□□□□ 0.82
HMGXB3-206ENST00000613459 MKNK2Q9HBH9 465 aa20.15■□□□□ 0.82
HMGXB3-206ENST00000613459 DBF4Q9UBU7 674 aaPredicted RBP20.15■□□□□ 0.82
HMGXB3-206ENST00000613459 POLR3DP05423 398 aaPredicted RBP20.15■□□□□ 0.82
HMGXB3-206ENST00000613459 IFIT5Q13325 482 aaKnown RBP20.14■□□□□ 0.82
HMGXB3-206ENST00000613459 TMOD3Q9NYL9 352 aa20.14■□□□□ 0.81
HMGXB3-206ENST00000613459 SKAP1Q86WV1 359 aa20.14■□□□□ 0.81
HMGXB3-206ENST00000613459 GOLGA6L10A0A0M3HER8 536 aa20.14■□□□□ 0.81
HMGXB3-206ENST00000613459 CUL5Q93034 780 aa20.14■□□□□ 0.81
HMGXB3-206ENST00000613459 ALS2CR12Q96Q35 445 aa20.14■□□□□ 0.81
HMGXB3-206ENST00000613459 ZHX1Q9UKY1 873 aaPredicted RBP20.14■□□□□ 0.81
HMGXB3-206ENST00000613459 LUZP1Q86V48 1076 aa20.13■□□□□ 0.81
HMGXB3-206ENST00000613459 TAOK3Q9H2K8 898 aa20.13■□□□□ 0.81
HMGXB3-206ENST00000613459 NCOA1Q15788 1441 aa20.13■□□□□ 0.81
HMGXB3-206ENST00000613459 ABCF2Q9UG63 623 aa20.13■□□□□ 0.81
HMGXB3-206ENST00000613459 FERMT3Q86UX7 667 aa20.13■□□□□ 0.81
HMGXB3-206ENST00000613459 MAGI1Q96QZ7 1491 aaPredicted RBP20.13■□□□□ 0.81
HMGXB3-206ENST00000613459 SMC1AQ14683 1233 aaKnown RBP20.13■□□□□ 0.81
HMGXB3-206ENST00000613459 CNNM3Q8NE01 707 aa20.13■□□□□ 0.81
HMGXB3-206ENST00000613459 CAMSAP2Q08AD1 1489 aa20.12■□□□□ 0.81
HMGXB3-206ENST00000613459 XPCQ01831 940 aaPredicted RBP20.12■□□□□ 0.81
HMGXB3-206ENST00000613459 CCDC150Q8NCX0 1101 aa20.12■□□□□ 0.81
HMGXB3-206ENST00000613459 TEX13AQ9BXU3 409 aaPredicted RBP20.12■□□□□ 0.81
HMGXB3-206ENST00000613459 CETN1Q12798 172 aa20.12■□□□□ 0.81
HMGXB3-206ENST00000613459 MYD88Q99836 296 aa20.12■□□□□ 0.81
HMGXB3-206ENST00000613459 CCDC194A0A1B0GVG4 234 aa20.12■□□□□ 0.81
HMGXB3-206ENST00000613459 GOLGA8AA7E2F4 631 aa20.12■□□□□ 0.81
HMGXB3-206ENST00000613459 GOLGA8BA8MQT2 603 aa20.12■□□□□ 0.81
HMGXB3-206ENST00000613459 BOLA2Q9H3K6 86 aa20.12■□□□□ 0.81
HMGXB3-206ENST00000613459 ECHDC1Q9NTX5 307 aa20.12■□□□□ 0.81
HMGXB3-206ENST00000613459 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.12■□□□□ 0.81
HMGXB3-206ENST00000613459 DYNC1I1O14576 645 aa20.12■□□□□ 0.81
HMGXB3-206ENST00000613459 CATIPQ7Z7H3 387 aa20.12■□□□□ 0.81
HMGXB3-206ENST00000613459 KIF14Q15058 1648 aa20.12■□□□□ 0.81
HMGXB3-206ENST00000613459 BAG4O95429 457 aaKnown RBP20.11■□□□□ 0.81
HMGXB3-206ENST00000613459 EHBP1Q8NDI1 1231 aa20.11■□□□□ 0.81
HMGXB3-206ENST00000613459 TNPO1Q92973 898 aaKnown RBP20.11■□□□□ 0.81
HMGXB3-206ENST00000613459 SCAF11Q99590 1463 aaKnown RBP20.11■□□□□ 0.81
HMGXB3-206ENST00000613459 STXBP4Q6ZWJ1 553 aa20.11■□□□□ 0.81
HMGXB3-206ENST00000613459 PTPN23Q9H3S7 1636 aa20.11■□□□□ 0.81
HMGXB3-206ENST00000613459 PRIMPOLQ96LW4 560 aa20.11■□□□□ 0.81
HMGXB3-206ENST00000613459 ANKRD18BA2A2Z9 1011 aa20.11■□□□□ 0.81
HMGXB3-206ENST00000613459 KIF5BP33176 963 aa20.11■□□□□ 0.81
HMGXB3-206ENST00000613459 SSR1P43307 286 aaKnown RBP20.11■□□□□ 0.81
HMGXB3-206ENST00000613459 ZNF444Q8N0Y2 327 aaPredicted RBP20.11■□□□□ 0.81
HMGXB3-206ENST00000613459 IFFO1Q0D2I5 559 aa20.11■□□□□ 0.81
HMGXB3-206ENST00000613459 IQGAP2Q13576 1575 aa20.1■□□□□ 0.81
HMGXB3-206ENST00000613459 MCM10Q7L590 875 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms