RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 SLC12A7Q9Y666 1083 aa17.97■□□□□ 0.47
TNXB-209ENST00000613214 LMAN1P49257 510 aa17.97■□□□□ 0.47
TNXB-209ENST00000613214 IFIT5Q13325 482 aaKnown RBP17.97■□□□□ 0.47
TNXB-209ENST00000613214 PICALMQ13492 652 aa17.97■□□□□ 0.47
TNXB-209ENST00000613214 FAM212AQ96EL1 285 aa17.96■□□□□ 0.47
TNXB-209ENST00000613214 CEP63Q96MT8 703 aa17.96■□□□□ 0.47
TNXB-209ENST00000613214 CASQ1P31415 396 aa17.96■□□□□ 0.47
TNXB-209ENST00000613214 CEP131Q9UPN4 1083 aa17.96■□□□□ 0.47
TNXB-209ENST00000613214 IFIT3O14879 490 aaKnown RBP17.96■□□□□ 0.47
TNXB-209ENST00000613214 HSP90AA4PQ58FG1 418 aa17.96■□□□□ 0.47
TNXB-209ENST00000613214 ATF7IPQ6VMQ6 1270 aa17.96■□□□□ 0.47
TNXB-209ENST00000613214 GJC1P36383 396 aa17.95■□□□□ 0.46
TNXB-209ENST00000613214 LUZP1Q86V48 1076 aa17.95■□□□□ 0.46
TNXB-209ENST00000613214 WASF1Q92558 559 aa17.95■□□□□ 0.46
TNXB-209ENST00000613214 SCAPERQ9BY12 1400 aa17.95■□□□□ 0.46
TNXB-209ENST00000613214 TAF7Q15545 349 aaPredicted RBP17.95■□□□□ 0.46
TNXB-209ENST00000613214 FKBP15Q5T1M5 1219 aa17.95■□□□□ 0.46
TNXB-209ENST00000613214 IDEP14735 1019 aa17.95■□□□□ 0.46
TNXB-209ENST00000613214 CHRNA2Q15822 529 aa17.95■□□□□ 0.46
TNXB-209ENST00000613214 ERLIN1O75477 346 aa17.94■□□□□ 0.46
TNXB-209ENST00000613214 SSRP1Q08945 709 aaKnown RBP17.94■□□□□ 0.46
TNXB-209ENST00000613214 ANKRD50Q9ULJ7 1429 aa17.94■□□□□ 0.46
TNXB-209ENST00000613214 MYOM3Q5VTT5 1437 aa17.94■□□□□ 0.46
TNXB-209ENST00000613214 SLC5A1P13866 664 aa17.94■□□□□ 0.46
TNXB-209ENST00000613214 ZNF213O14771 459 aa17.94■□□□□ 0.46
TNXB-209ENST00000613214 CTCFLQ8NI51 663 aaPredicted RBP17.94■□□□□ 0.46
TNXB-209ENST00000613214 CEBPAP49715 358 aaPredicted RBP17.94■□□□□ 0.46
TNXB-209ENST00000613214 HOMER2Q9NSB8 354 aa17.94■□□□□ 0.46
TNXB-209ENST00000613214 JAG2Q9Y219 1238 aa17.94■□□□□ 0.46
TNXB-209ENST00000613214 MVPQ14764 893 aaKnown RBP17.94■□□□□ 0.46
TNXB-209ENST00000613214 GDPD2Q9HCC8 539 aa17.94■□□□□ 0.46
TNXB-209ENST00000613214 FYCO1Q9BQS8 1478 aa17.94■□□□□ 0.46
TNXB-209ENST00000613214 RRBP1Q9P2E9 1410 aaKnown RBP17.94■□□□□ 0.46
TNXB-209ENST00000613214 RFC4P35249 363 aa17.93■□□□□ 0.46
TNXB-209ENST00000613214 GRIPAP1Q4V328 841 aa17.93■□□□□ 0.46
TNXB-209ENST00000613214 NUDT16Q96DE0 195 aaKnown RBP17.93■□□□□ 0.46
TNXB-209ENST00000613214 POLR3GO15318 223 aaPredicted RBP17.93■□□□□ 0.46
TNXB-209ENST00000613214 GOLGA8AA7E2F4 631 aa17.93■□□□□ 0.46
TNXB-209ENST00000613214 GOLGA8BA8MQT2 603 aa17.93■□□□□ 0.46
TNXB-209ENST00000613214 EIF3JO75822 258 aaKnown RBP17.93■□□□□ 0.46
TNXB-209ENST00000613214 TXLNBQ8N3L3 684 aa17.93■□□□□ 0.46
TNXB-209ENST00000613214 GAPVD1Q14C86 1478 aa17.93■□□□□ 0.46
TNXB-209ENST00000613214 CETN2P41208 172 aa17.93■□□□□ 0.46
TNXB-209ENST00000613214 NOP2P46087 812 aaKnown RBP17.93■□□□□ 0.46
TNXB-209ENST00000613214 RNF187Q5TA31 235 aaPredicted RBP17.93■□□□□ 0.46
TNXB-209ENST00000613214 OTUD6BQ8N6M0 293 aa17.93■□□□□ 0.46
TNXB-209ENST00000613214 GRPEL1Q9HAV7 217 aa17.93■□□□□ 0.46
TNXB-209ENST00000613214 APBB1IPQ7Z5R6 666 aaPredicted RBP17.92■□□□□ 0.46
TNXB-209ENST00000613214 CCDC66A2RUB6 948 aa17.92■□□□□ 0.46
TNXB-209ENST00000613214 INCENPQ9NQS7 918 aa17.92■□□□□ 0.46
TNXB-209ENST00000613214 GOLIM4O00461 696 aa17.92■□□□□ 0.46
TNXB-209ENST00000613214 TMCO3Q6UWJ1 677 aa17.92■□□□□ 0.46
TNXB-209ENST00000613214 HOOK3Q86VS8 718 aa17.92■□□□□ 0.46
TNXB-209ENST00000613214 C8orf76Q96K31 380 aa17.92■□□□□ 0.46
TNXB-209ENST00000613214 MYO1BO43795 1136 aa17.92■□□□□ 0.46
TNXB-209ENST00000613214 ZNF287Q9HBT7 754 aa17.92■□□□□ 0.46
TNXB-209ENST00000613214 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.92■□□□□ 0.46
TNXB-209ENST00000613214 SMTNL1A8MU46 457 aa17.92■□□□□ 0.46
TNXB-209ENST00000613214 ZNF692Q9BU19 519 aaPredicted RBP17.92■□□□□ 0.46
TNXB-209ENST00000613214 URI1O94763 535 aaPredicted RBP17.92■□□□□ 0.46
TNXB-209ENST00000613214 MAP3K12Q12852 859 aa17.92■□□□□ 0.46
TNXB-209ENST00000613214 IQCEQ6IPM2 695 aa17.92■□□□□ 0.46
TNXB-209ENST00000613214 ZBTB21Q9ULJ3 1066 aa17.91■□□□□ 0.46
TNXB-209ENST00000613214 SP4Q02446 784 aa17.91■□□□□ 0.46
TNXB-209ENST00000613214 ATP2B3Q16720 1220 aa17.91■□□□□ 0.46
TNXB-209ENST00000613214 C16orf71Q8IYS4 520 aaPredicted RBP17.91■□□□□ 0.46
TNXB-209ENST00000613214 ERBINQ96RT1 1412 aa17.91■□□□□ 0.46
TNXB-209ENST00000613214 AKAP2Q9Y2D5 859 aa17.91■□□□□ 0.46
TNXB-209ENST00000613214 TFIP11Q9UBB9 837 aaKnown RBP17.91■□□□□ 0.46
TNXB-209ENST00000613214 CCDC194A0A1B0GVG4 234 aa17.91■□□□□ 0.46
TNXB-209ENST00000613214 ANXA1P04083 346 aa17.91■□□□□ 0.46
TNXB-209ENST00000613214 MTIF2P46199 727 aaKnown RBP17.91■□□□□ 0.46
TNXB-209ENST00000613214 TMEM266Q2M3C6 531 aa17.91■□□□□ 0.46
TNXB-209ENST00000613214 TSPY2A6NKD2 308 aa17.9■□□□□ 0.46
TNXB-209ENST00000613214 TMEM110-MUSTN1A8MSY1 372 aa17.9■□□□□ 0.46
TNXB-209ENST00000613214 MAP3K11Q16584 847 aa17.9■□□□□ 0.46
TNXB-209ENST00000613214 FANCIQ9NVI1 1328 aa17.9■□□□□ 0.46
TNXB-209ENST00000613214 ANKRD18BA2A2Z9 1011 aa17.9■□□□□ 0.46
TNXB-209ENST00000613214 ATP2C2O75185 946 aa17.9■□□□□ 0.46
TNXB-209ENST00000613214 KIF4BQ2VIQ3 1234 aa17.9■□□□□ 0.46
TNXB-209ENST00000613214 U3KPZ7 1027 aaPredicted RBP17.9■□□□□ 0.46
TNXB-209ENST00000613214 HLTFQ14527 1009 aaKnown RBP eCLIP17.9■□□□□ 0.46
TNXB-209ENST00000613214 DNAI2Q9GZS0 605 aa17.9■□□□□ 0.46
TNXB-209ENST00000613214 ZSWIM4Q9H7M6 989 aa17.9■□□□□ 0.46
TNXB-209ENST00000613214 IQCA1Q86XH1 822 aa17.9■□□□□ 0.46
TNXB-209ENST00000613214 PABPN1LA6NDY0 278 aaKnown RBP17.89■□□□□ 0.46
TNXB-209ENST00000613214 CCDC40Q4G0X9 1142 aa17.89■□□□□ 0.46
TNXB-209ENST00000613214 NME9Q86XW9 330 aa17.89■□□□□ 0.45
TNXB-209ENST00000613214 PAIP2Q9BPZ3 127 aaKnown RBP17.89■□□□□ 0.45
TNXB-209ENST00000613214 SYNCQ9H7C4 482 aa17.89■□□□□ 0.45
TNXB-209ENST00000613214 STAMBPO95630 424 aa17.89■□□□□ 0.45
TNXB-209ENST00000613214 CNNM3Q8NE01 707 aa17.89■□□□□ 0.45
TNXB-209ENST00000613214 CRACR2AQ9BSW2 395 aa17.89■□□□□ 0.45
TNXB-209ENST00000613214 RNF216Q9NWF9 866 aaPredicted RBP17.89■□□□□ 0.45
TNXB-209ENST00000613214 PROCA1Q8NCQ7 364 aaPredicted RBP17.89■□□□□ 0.45
TNXB-209ENST00000613214 VEZTQ9HBM0 779 aa17.89■□□□□ 0.45
TNXB-209ENST00000613214 A0A087WZG4 1122 aa17.89■□□□□ 0.45
TNXB-209ENST00000613214 MICU3Q86XE3 530 aa17.89■□□□□ 0.45
TNXB-209ENST00000613214 CBX1P83916 185 aa17.88■□□□□ 0.45
TNXB-209ENST00000613214 BIN2Q9UBW5 565 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms