RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 NARFQ9UHQ1 456 aa23.14■■□□□ 1.29
PRKN-209ENST00000612485 SIPA1L3O60292 1781 aaPredicted RBP23.14■■□□□ 1.29
PRKN-209ENST00000612485 HEG1Q9ULI3 1381 aa23.14■■□□□ 1.29
PRKN-209ENST00000612485 FMNL2Q96PY5 1086 aa23.13■■□□□ 1.29
PRKN-209ENST00000612485 A0A0G2JLW4 131 aa23.12■■□□□ 1.29
PRKN-209ENST00000612485 BTBD11A6QL63 1104 aa23.12■■□□□ 1.29
PRKN-209ENST00000612485 CANXP27824 592 aaKnown RBP23.12■■□□□ 1.29
PRKN-209ENST00000612485 DDR1Q08345 913 aa23.12■■□□□ 1.29
PRKN-209ENST00000612485 KIAA1551Q9HCM1 1747 aa23.11■■□□□ 1.29
PRKN-209ENST00000612485 TM4SF1P30408 202 aa23.11■■□□□ 1.29
PRKN-209ENST00000612485 A0A087WZG4 1122 aa23.1■■□□□ 1.29
PRKN-209ENST00000612485 POLRMTO00411 1230 aaKnown RBP23.1■■□□□ 1.29
PRKN-209ENST00000612485 HTATSF1O43719 755 aaKnown RBP23.1■■□□□ 1.29
PRKN-209ENST00000612485 NEFMP07197 916 aa23.1■■□□□ 1.29
PRKN-209ENST00000612485 DPEP1P16444 411 aa23.1■■□□□ 1.29
PRKN-209ENST00000612485 N4BP2Q86UW6 1770 aaPredicted RBP23.09■■□□□ 1.29
PRKN-209ENST00000612485 BCS1LQ9Y276 419 aa23.09■■□□□ 1.29
PRKN-209ENST00000612485 EIF5P55010 431 aaKnown RBP23.08■■□□□ 1.29
PRKN-209ENST00000612485 MCM10Q7L590 875 aa23.08■■□□□ 1.29
PRKN-209ENST00000612485 GIGYF1O75420 1035 aaPredicted RBP23.07■■□□□ 1.28
PRKN-209ENST00000612485 ATP10DQ9P241 1426 aa23.07■■□□□ 1.28
PRKN-209ENST00000612485 KCNQ3O43525 872 aa23.06■■□□□ 1.28
PRKN-209ENST00000612485 NFIXQ14938 502 aa23.06■■□□□ 1.28
PRKN-209ENST00000612485 ADCY9O60503 1353 aa23.05■■□□□ 1.28
PRKN-209ENST00000612485 IL6STP40189 918 aaPredicted RBP23.05■■□□□ 1.28
PRKN-209ENST00000612485 NPM2Q86SE8 214 aaKnown RBP23.05■■□□□ 1.28
PRKN-209ENST00000612485 BCL2L12Q9HB09 334 aa23.05■■□□□ 1.28
PRKN-209ENST00000612485 PIM2Q9P1W9 311 aa23.05■■□□□ 1.28
PRKN-209ENST00000612485 KCNA3P22001 575 aa23.04■■□□□ 1.28
PRKN-209ENST00000612485 C1QTNF8P60827 252 aa23.04■■□□□ 1.28
PRKN-209ENST00000612485 RALBP1Q15311 655 aa23.04■■□□□ 1.28
PRKN-209ENST00000612485 PNNQ9H307 717 aaKnown RBP23.04■■□□□ 1.28
PRKN-209ENST00000612485 DCTN1Q14203 1278 aa23.03■■□□□ 1.28
PRKN-209ENST00000612485 ZNF330Q9Y3S2 320 aaPredicted RBP23.03■■□□□ 1.28
PRKN-209ENST00000612485 BRCA1P38398 1863 aaKnown RBP23.01■■□□□ 1.27
PRKN-209ENST00000612485 A1BGP04217 495 aa23.01■■□□□ 1.27
PRKN-209ENST00000612485 SERPINB2P05120 415 aa23.01■■□□□ 1.27
PRKN-209ENST00000612485 SNRPA1P09661 255 aaKnown RBP23.01■■□□□ 1.27
PRKN-209ENST00000612485 DALRD3Q5D0E6 543 aaKnown RBP23.01■■□□□ 1.27
PRKN-209ENST00000612485 ARHGAP27Q6ZUM4 889 aa23.01■■□□□ 1.27
PRKN-209ENST00000612485 GPBP1L1Q9HC44 474 aaPredicted RBP23.01■■□□□ 1.27
PRKN-209ENST00000612485 TAF7Q15545 349 aaPredicted RBP23■■□□□ 1.27
PRKN-209ENST00000612485 PLEKHF1Q96S99 279 aa23■■□□□ 1.27
PRKN-209ENST00000612485 CHRNA5P30532 468 aa22.99■■□□□ 1.27
PRKN-209ENST00000612485 DDX10Q13206 875 aaKnown RBP22.99■■□□□ 1.27
PRKN-209ENST00000612485 TBC1D2BQ9UPU7 963 aa22.99■■□□□ 1.27
PRKN-209ENST00000612485 USP16Q9Y5T5 823 aa22.99■■□□□ 1.27
PRKN-209ENST00000612485 MAPK8IP3Q9UPT6 1336 aa22.99■■□□□ 1.27
PRKN-209ENST00000612485 NFE2L2Q16236 605 aa22.98■■□□□ 1.27
PRKN-209ENST00000612485 BICDL1Q6ZP65 573 aa22.98■■□□□ 1.27
PRKN-209ENST00000612485 NRXN2Q9P2S2 1712 aa22.98■■□□□ 1.27
PRKN-209ENST00000612485 AFDNP55196 1824 aaKnown RBP22.98■■□□□ 1.27
PRKN-209ENST00000612485 PNISRQ8TF01 805 aaKnown RBP22.97■■□□□ 1.27
PRKN-209ENST00000612485 SCN7AQ01118 1682 aa22.97■■□□□ 1.27
PRKN-209ENST00000612485 ARFGEF1Q9Y6D6 1849 aa22.96■■□□□ 1.27
PRKN-209ENST00000612485 PRAMEF22A3QJZ6 481 aa22.96■■□□□ 1.27
PRKN-209ENST00000612485 TBC1D9BQ66K14 1250 aa22.96■■□□□ 1.27
PRKN-209ENST00000612485 ZNF526Q8TF50 670 aaPredicted RBP22.96■■□□□ 1.27
PRKN-209ENST00000612485 DZIP3Q86Y13 1208 aaKnown RBP22.95■■□□□ 1.26
PRKN-209ENST00000612485 CARMIL3Q8ND23 1372 aa22.94■■□□□ 1.26
PRKN-209ENST00000612485 CAMTA2O94983 1202 aa22.94■■□□□ 1.26
PRKN-209ENST00000612485 MYBBP1AQ9BQG0 1328 aaKnown RBP22.93■■□□□ 1.26
PRKN-209ENST00000612485 DLG5Q8TDM6 1919 aa22.93■■□□□ 1.26
PRKN-209ENST00000612485 SETDB2Q96T68 719 aa22.93■■□□□ 1.26
PRKN-209ENST00000612485 MIS18AQ9NYP9 233 aa22.93■■□□□ 1.26
PRKN-209ENST00000612485 SENP3-EIF4A1A0A087X0R7 540 aa22.92■■□□□ 1.26
PRKN-209ENST00000612485 PIP4K2AP48426 406 aaPredicted RBP22.92■■□□□ 1.26
PRKN-209ENST00000612485 C2CD5Q86YS7 1000 aa22.92■■□□□ 1.26
PRKN-209ENST00000612485 PDZRN3Q9UPQ7 1066 aa22.92■■□□□ 1.26
PRKN-209ENST00000612485 H0YIN7 160 aa22.91■■□□□ 1.26
PRKN-209ENST00000612485 CLEC4GQ6UXB4 293 aa22.9■■□□□ 1.26
PRKN-209ENST00000612485 BRIP1Q9BX63 1249 aa22.9■■□□□ 1.26
PRKN-209ENST00000612485 ZNF652Q9Y2D9 606 aa22.9■■□□□ 1.26
PRKN-209ENST00000612485 NPHP1O15259 732 aa22.89■■□□□ 1.25
PRKN-209ENST00000612485 PDE6BP35913 854 aa22.89■■□□□ 1.25
PRKN-209ENST00000612485 C9orf131Q5VYM1 1079 aa22.89■■□□□ 1.25
PRKN-209ENST00000612485 PRR5LQ6MZQ0 368 aa22.89■■□□□ 1.25
PRKN-209ENST00000612485 TTLL6Q8N841 843 aa22.89■■□□□ 1.25
PRKN-209ENST00000612485 BCORQ6W2J9 1755 aa22.89■■□□□ 1.25
PRKN-209ENST00000612485 NBPF26B4DH59 902 aa22.88■■□□□ 1.25
PRKN-209ENST00000612485 NBPF10Q6P3W6 841 aaKnown RBP22.88■■□□□ 1.25
PRKN-209ENST00000612485 NBPF15Q8N660 670 aa22.88■■□□□ 1.25
PRKN-209ENST00000612485 CNBD1Q8NA66 436 aa22.88■■□□□ 1.25
PRKN-209ENST00000612485 THUMPD2Q9BTF0 503 aaKnown RBP22.88■■□□□ 1.25
PRKN-209ENST00000612485 KDM3BQ7LBC6 1761 aa22.88■■□□□ 1.25
PRKN-209ENST00000612485 DLEC1Q9Y238 1755 aa22.87■■□□□ 1.25
PRKN-209ENST00000612485 RGL2O15211 777 aa22.87■■□□□ 1.25
PRKN-209ENST00000612485 RIPK4P57078 832 aa22.86■■□□□ 1.25
PRKN-209ENST00000612485 EIF4A1P60842 406 aaKnown RBP22.86■■□□□ 1.25
PRKN-209ENST00000612485 ST5P78524 1137 aa22.86■■□□□ 1.25
PRKN-209ENST00000612485 LAMB4A4D0S4 1761 aa22.86■■□□□ 1.25
PRKN-209ENST00000612485 LMOD3Q0VAK6 560 aa22.85■■□□□ 1.25
PRKN-209ENST00000612485 RNF181Q9P0P0 153 aa22.85■■□□□ 1.25
PRKN-209ENST00000612485 CCDC24Q8N4L8 307 aa22.84■■□□□ 1.25
PRKN-209ENST00000612485 ZNF622Q969S3 477 aaKnown RBP eCLIP22.84■■□□□ 1.25
PRKN-209ENST00000612485 KIF3CO14782 793 aa22.83■■□□□ 1.25
PRKN-209ENST00000612485 TMPOP42166 694 aaKnown RBP22.83■■□□□ 1.25
PRKN-209ENST00000612485 WDR43Q15061 677 aaKnown RBP eCLIP22.83■■□□□ 1.25
PRKN-209ENST00000612485 NBPF5PQ86XG9 351 aaPredicted RBP22.83■■□□□ 1.25
PRKN-209ENST00000612485 TSPYL4Q9UJ04 414 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms