RNA–Protein interactions for RNA: ENST00000612394.4

PCDH15-224, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-224ENST00000612394 CTCFLQ8NI51 663 aaPredicted RBP10.65□□□□□ -0.7
PCDH15-224ENST00000612394 CCDC12Q8WUD4 166 aaPredicted RBP10.65□□□□□ -0.7
PCDH15-224ENST00000612394 EMILIN1Q9Y6C2 1016 aa10.65□□□□□ -0.7
PCDH15-224ENST00000612394 ADAMTS12P58397 1594 aa10.65□□□□□ -0.7
PCDH15-224ENST00000612394 GSTO1P78417 241 aa10.65□□□□□ -0.7
PCDH15-224ENST00000612394 CCDC178Q5BJE1 867 aa10.65□□□□□ -0.7
PCDH15-224ENST00000612394 SSH1Q8WYL5 1049 aa10.65□□□□□ -0.7
PCDH15-224ENST00000612394 KIAA0556O60303 1618 aa10.65□□□□□ -0.7
PCDH15-224ENST00000612394 BRPF1P55201 1214 aaPredicted RBP10.65□□□□□ -0.7
PCDH15-224ENST00000612394 RIMS2Q9UQ26 1411 aa10.65□□□□□ -0.7
PCDH15-224ENST00000612394 FGFR1OPO95684 399 aaKnown RBP10.65□□□□□ -0.71
PCDH15-224ENST00000612394 ARHGAP45Q92619 1136 aa10.65□□□□□ -0.71
PCDH15-224ENST00000612394 ZHX3Q9H4I2 956 aa10.65□□□□□ -0.71
PCDH15-224ENST00000612394 SNRPA1P09661 255 aaKnown RBP10.64□□□□□ -0.71
PCDH15-224ENST00000612394 ZRSR2Q15696 482 aaKnown RBP10.64□□□□□ -0.71
PCDH15-224ENST00000612394 ZNF397Q8NF99 534 aaPredicted RBP10.64□□□□□ -0.71
PCDH15-224ENST00000612394 ABCF2Q9UG63 623 aa10.64□□□□□ -0.71
PCDH15-224ENST00000612394 KIF21AQ7Z4S6 1674 aa10.64□□□□□ -0.71
PCDH15-224ENST00000612394 UQCRFS1P1P0C7P4 283 aa10.64□□□□□ -0.71
PCDH15-224ENST00000612394 TSG101Q99816 390 aa10.64□□□□□ -0.71
PCDH15-224ENST00000612394 SCAND2PQ9GZW5 306 aaPredicted RBP10.64□□□□□ -0.71
PCDH15-224ENST00000612394 ATP10BO94823 1461 aa10.64□□□□□ -0.71
PCDH15-224ENST00000612394 TCOF1Q13428 1488 aaKnown RBP10.64□□□□□ -0.71
PCDH15-224ENST00000612394 ACEP12821 1306 aa10.64□□□□□ -0.71
PCDH15-224ENST00000612394 NPHP3Q7Z494 1330 aa10.64□□□□□ -0.71
PCDH15-224ENST00000612394 CCDC181Q5TID7 509 aa10.64□□□□□ -0.71
PCDH15-224ENST00000612394 ZNF444Q8N0Y2 327 aaPredicted RBP10.64□□□□□ -0.71
PCDH15-224ENST00000612394 PTCD1O75127 700 aaKnown RBP10.64□□□□□ -0.71
PCDH15-224ENST00000612394 ERLIN1O75477 346 aa10.64□□□□□ -0.71
PCDH15-224ENST00000612394 FLIIQ13045 1269 aa10.64□□□□□ -0.71
PCDH15-224ENST00000612394 TMEM266Q2M3C6 531 aa10.64□□□□□ -0.71
PCDH15-224ENST00000612394 UNC13AQ9UPW8 1703 aa10.64□□□□□ -0.71
PCDH15-224ENST00000612394 ANKRD24Q8TF21 1146 aa10.63□□□□□ -0.71
PCDH15-224ENST00000612394 NGLY1Q96IV0 654 aa10.63□□□□□ -0.71
PCDH15-224ENST00000612394 UPF3BQ9BZI7 483 aaKnown RBP10.63□□□□□ -0.71
PCDH15-224ENST00000612394 EXOC6BQ9Y2D4 811 aa10.63□□□□□ -0.71
PCDH15-224ENST00000612394 SYCP2Q9BX26 1530 aa10.63□□□□□ -0.71
PCDH15-224ENST00000612394 ST5P78524 1137 aa10.63□□□□□ -0.71
PCDH15-224ENST00000612394 MPRIPQ6WCQ1 1025 aa10.63□□□□□ -0.71
PCDH15-224ENST00000612394 HMG20BQ9P0W2 317 aa10.63□□□□□ -0.71
PCDH15-224ENST00000612394 GOLGA6L10A6NI86 522 aa10.63□□□□□ -0.71
PCDH15-224ENST00000612394 ZNF213O14771 459 aa10.63□□□□□ -0.71
PCDH15-224ENST00000612394 CTAGE5O15320 804 aa10.63□□□□□ -0.71
PCDH15-224ENST00000612394 SMARCC1Q92922 1105 aaPredicted RBP10.63□□□□□ -0.71
PCDH15-224ENST00000612394 FOXO3O43524 673 aa10.63□□□□□ -0.71
PCDH15-224ENST00000612394 TRPM2O94759 1503 aa10.63□□□□□ -0.71
PCDH15-224ENST00000612394 BAG3O95817 575 aa10.63□□□□□ -0.71
PCDH15-224ENST00000612394 MAP3K11Q16584 847 aa10.63□□□□□ -0.71
PCDH15-224ENST00000612394 MIS18AQ9NYP9 233 aa10.63□□□□□ -0.71
PCDH15-224ENST00000612394 SLC12A7Q9Y666 1083 aa10.63□□□□□ -0.71
PCDH15-224ENST00000612394 ZFYVE9O95405 1425 aa10.63□□□□□ -0.71
PCDH15-224ENST00000612394 SSRP1Q08945 709 aaKnown RBP10.62□□□□□ -0.71
PCDH15-224ENST00000612394 STK11IPQ8N1F8 1099 aa10.62□□□□□ -0.71
PCDH15-224ENST00000612394 PPIP5K1Q6PFW1 1433 aa10.62□□□□□ -0.71
PCDH15-224ENST00000612394 JAKMIP3Q5VZ66 844 aa10.62□□□□□ -0.71
PCDH15-224ENST00000612394 PRPF40BQ6NWY9 871 aaKnown RBP10.62□□□□□ -0.71
PCDH15-224ENST00000612394 SOS1Q07889 1333 aaPredicted RBP10.62□□□□□ -0.71
PCDH15-224ENST00000612394 KIF5BP33176 963 aa10.62□□□□□ -0.71
PCDH15-224ENST00000612394 DDX46Q7L014 1031 aaKnown RBP10.62□□□□□ -0.71
PCDH15-224ENST00000612394 USHBP1Q8N6Y0 703 aa10.62□□□□□ -0.71
PCDH15-224ENST00000612394 TRAF1Q13077 416 aa10.62□□□□□ -0.71
PCDH15-224ENST00000612394 TTLL5Q6EMB2 1281 aa10.62□□□□□ -0.71
PCDH15-224ENST00000612394 CATIPQ7Z7H3 387 aa10.62□□□□□ -0.71
PCDH15-224ENST00000612394 LRRFIP2Q9Y608 721 aaKnown RBP10.62□□□□□ -0.71
PCDH15-224ENST00000612394 KIF2AO00139 706 aaPredicted RBP10.62□□□□□ -0.71
PCDH15-224ENST00000612394 ZGPATQ8N5A5 531 aaKnown RBP10.62□□□□□ -0.71
PCDH15-224ENST00000612394 ECHDC1Q9NTX5 307 aa10.62□□□□□ -0.71
PCDH15-224ENST00000612394 MAP3K2Q9Y2U5 619 aa10.62□□□□□ -0.71
PCDH15-224ENST00000612394 NUP153P49790 1475 aaKnown RBP10.61□□□□□ -0.71
PCDH15-224ENST00000612394 DISP3Q9P2K9 1392 aa10.61□□□□□ -0.71
PCDH15-224ENST00000612394 CCDC152Q4G0S7 254 aa10.61□□□□□ -0.71
PCDH15-224ENST00000612394 BAG4O95429 457 aaKnown RBP10.61□□□□□ -0.71
PCDH15-224ENST00000612394 MATR3P43243 847 aaKnown RBP eCLIP10.61□□□□□ -0.71
PCDH15-224ENST00000612394 MPHOSPH6Q99547 160 aaKnown RBP10.61□□□□□ -0.71
PCDH15-224ENST00000612394 SSBP05455 408 aaKnown RBP eCLIP10.61□□□□□ -0.71
PCDH15-224ENST00000612394 CETN2P41208 172 aa10.61□□□□□ -0.71
PCDH15-224ENST00000612394 PDE4BQ07343 736 aa10.61□□□□□ -0.71
PCDH15-224ENST00000612394 LRRC27Q9C0I9 530 aa10.61□□□□□ -0.71
PCDH15-224ENST00000612394 PAF1Q8N7H5 531 aa10.6□□□□□ -0.71
PCDH15-224ENST00000612394 C8orf76Q96K31 380 aa10.6□□□□□ -0.71
PCDH15-224ENST00000612394 BOLA2Q9H3K6 86 aa10.6□□□□□ -0.71
PCDH15-224ENST00000612394 ANO10Q9NW15 660 aa10.6□□□□□ -0.71
PCDH15-224ENST00000612394 CFAP43Q8NDM7 1665 aa10.6□□□□□ -0.71
PCDH15-224ENST00000612394 TOM1O60784 492 aa10.6□□□□□ -0.71
PCDH15-224ENST00000612394 ADAMTS2O95450 1211 aa10.6□□□□□ -0.71
PCDH15-224ENST00000612394 FKBP15Q5T1M5 1219 aa10.6□□□□□ -0.71
PCDH15-224ENST00000612394 ALDH1L1O75891 902 aa10.6□□□□□ -0.71
PCDH15-224ENST00000612394 HLA-DOAP06340 250 aa10.6□□□□□ -0.71
PCDH15-224ENST00000612394 THUMPD2Q9BTF0 503 aaKnown RBP10.6□□□□□ -0.71
PCDH15-224ENST00000612394 LIMCH1Q9UPQ0 1083 aa10.6□□□□□ -0.71
PCDH15-224ENST00000612394 MINDY4BA8MYZ0 360 aa10.6□□□□□ -0.71
PCDH15-224ENST00000612394 EIF3JO75822 258 aaKnown RBP10.6□□□□□ -0.71
PCDH15-224ENST00000612394 ZFYP08048 801 aaPredicted RBP10.6□□□□□ -0.71
PCDH15-224ENST00000612394 AKAP4Q5JQC9 854 aa10.6□□□□□ -0.71
PCDH15-224ENST00000612394 TAF4BQ92750 862 aa10.6□□□□□ -0.71
PCDH15-224ENST00000612394 SPINK5Q9NQ38 1064 aaPredicted RBP10.6□□□□□ -0.71
PCDH15-224ENST00000612394 CCDC85AQ96PX6 553 aaPredicted RBP10.59□□□□□ -0.71
PCDH15-224ENST00000612394 GRPEL1Q9HAV7 217 aa10.59□□□□□ -0.71
PCDH15-224ENST00000612394 GOLGA8AA7E2F4 631 aa10.59□□□□□ -0.71
PCDH15-224ENST00000612394 GOLGA8BA8MQT2 603 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms