RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 GAS2L3Q86XJ1 694 aa21.03■□□□□ 0.96
NEK3-206ENST00000611833 PI4KAP1Q8N8J0 262 aa21.03■□□□□ 0.96
NEK3-206ENST00000611833 CHMP4AQ9BY43 222 aa21.03■□□□□ 0.96
NEK3-206ENST00000611833 IL1RAPL2Q9NP60 686 aa21.03■□□□□ 0.96
NEK3-206ENST00000611833 ANO2Q9NQ90 1003 aa21.03■□□□□ 0.96
NEK3-206ENST00000611833 CYP2E1P05181 493 aaPredicted RBP21.03■□□□□ 0.96
NEK3-206ENST00000611833 POLA2Q14181 598 aa21.03■□□□□ 0.96
NEK3-206ENST00000611833 KLHL40Q2TBA0 621 aa21.03■□□□□ 0.96
NEK3-206ENST00000611833 LMOD2Q6P5Q4 547 aa21.03■□□□□ 0.96
NEK3-206ENST00000611833 DNAAF4Q8WXU2 420 aa21.03■□□□□ 0.96
NEK3-206ENST00000611833 RRAGDQ9NQL2 400 aaPredicted RBP21.03■□□□□ 0.96
NEK3-206ENST00000611833 RNMTO43148 476 aaKnown RBP21.02■□□□□ 0.96
NEK3-206ENST00000611833 SURF6O75683 361 aaKnown RBP21.02■□□□□ 0.96
NEK3-206ENST00000611833 PKP1Q13835 747 aa21.02■□□□□ 0.96
NEK3-206ENST00000611833 ANKRD24Q8TF21 1146 aa21.02■□□□□ 0.96
NEK3-206ENST00000611833 RAB11FIP3O75154 756 aa21.01■□□□□ 0.95
NEK3-206ENST00000611833 UNC5CLQ8IV45 518 aa21.01■□□□□ 0.95
NEK3-206ENST00000611833 ANO8Q9HCE9 1232 aaPredicted RBP21.01■□□□□ 0.95
NEK3-206ENST00000611833 AXIN2Q9Y2T1 843 aa21.01■□□□□ 0.95
NEK3-206ENST00000611833 TRPM3Q9HCF6 1732 aaPredicted RBP21.01■□□□□ 0.95
NEK3-206ENST00000611833 ADCY9O60503 1353 aa21.01■□□□□ 0.95
NEK3-206ENST00000611833 C1orf141Q5JVX7 400 aa21■□□□□ 0.95
NEK3-206ENST00000611833 AOX1Q06278 1338 aa21■□□□□ 0.95
NEK3-206ENST00000611833 MCM2P49736 904 aa21■□□□□ 0.95
NEK3-206ENST00000611833 NUTM1Q86Y26 1132 aa21■□□□□ 0.95
NEK3-206ENST00000611833 SRGAP3O43295 1099 aa20.99■□□□□ 0.95
NEK3-206ENST00000611833 CAMTA1Q9Y6Y1 1673 aa20.99■□□□□ 0.95
NEK3-206ENST00000611833 NCLP19338 710 aaKnown RBP20.98■□□□□ 0.95
NEK3-206ENST00000611833 ANAPC15P60006 121 aa20.98■□□□□ 0.95
NEK3-206ENST00000611833 TMX3Q96JJ7 454 aa20.98■□□□□ 0.95
NEK3-206ENST00000611833 OVOS2A0A0G2JMS6 1433 aa20.98■□□□□ 0.95
NEK3-206ENST00000611833 RHPN1Q8TCX5 695 aa20.98■□□□□ 0.95
NEK3-206ENST00000611833 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.98■□□□□ 0.95
NEK3-206ENST00000611833 DBF4Q9UBU7 674 aaPredicted RBP20.98■□□□□ 0.95
NEK3-206ENST00000611833 KRT28Q7Z3Y7 464 aa20.97■□□□□ 0.95
NEK3-206ENST00000611833 PALD1Q9ULE6 856 aa20.97■□□□□ 0.95
NEK3-206ENST00000611833 GIGYF1O75420 1035 aaPredicted RBP20.96■□□□□ 0.95
NEK3-206ENST00000611833 KIF1BPQ96EK5 621 aa20.96■□□□□ 0.95
NEK3-206ENST00000611833 LMBRD1Q9NUN5 540 aa20.96■□□□□ 0.95
NEK3-206ENST00000611833 HEG1Q9ULI3 1381 aa20.96■□□□□ 0.95
NEK3-206ENST00000611833 PROSER3Q2NL68 480 aa20.95■□□□□ 0.94
NEK3-206ENST00000611833 ZDHHC9Q9Y397 364 aa20.95■□□□□ 0.94
NEK3-206ENST00000611833 RGPD5Q99666 1765 aa20.95■□□□□ 0.94
NEK3-206ENST00000611833 PRAMEF22A3QJZ6 481 aa20.95■□□□□ 0.94
NEK3-206ENST00000611833 IL25Q9H293 177 aa20.95■□□□□ 0.94
NEK3-206ENST00000611833 MAP4K4O95819 1239 aaPredicted RBP20.94■□□□□ 0.94
NEK3-206ENST00000611833 PROSER2Q86WR7 435 aaPredicted RBP20.94■□□□□ 0.94
NEK3-206ENST00000611833 PI4K2BQ8TCG2 481 aa20.94■□□□□ 0.94
NEK3-206ENST00000611833 C1orf167Q5SNV9 1468 aa20.94■□□□□ 0.94
NEK3-206ENST00000611833 SIPA1L3O60292 1781 aaPredicted RBP20.94■□□□□ 0.94
NEK3-206ENST00000611833 PRPF40AO75400 957 aaKnown RBP20.93■□□□□ 0.94
NEK3-206ENST00000611833 CAVIN1Q6NZI2 390 aaKnown RBP20.93■□□□□ 0.94
NEK3-206ENST00000611833 NOL8Q76FK4 1167 aaKnown RBP20.93■□□□□ 0.94
NEK3-206ENST00000611833 MAP3K2Q9Y2U5 619 aa20.93■□□□□ 0.94
NEK3-206ENST00000611833 HSP90AB4PQ58FF6 505 aa20.93■□□□□ 0.94
NEK3-206ENST00000611833 TRIM44Q96DX7 344 aaPredicted RBP20.93■□□□□ 0.94
NEK3-206ENST00000611833 KIF1AQ12756 1690 aa20.93■□□□□ 0.94
NEK3-206ENST00000611833 ERBB3P21860 1342 aa20.92■□□□□ 0.94
NEK3-206ENST00000611833 OS9Q13438 667 aaPredicted RBP20.92■□□□□ 0.94
NEK3-206ENST00000611833 ADAMTS7Q9UKP4 1686 aa20.91■□□□□ 0.94
NEK3-206ENST00000611833 FOXD4L5Q5VV16 416 aaPredicted RBP20.91■□□□□ 0.94
NEK3-206ENST00000611833 FOXD4L4Q8WXT5 416 aaPredicted RBP20.91■□□□□ 0.94
NEK3-206ENST00000611833 EPB41L2O43491 1005 aaKnown RBP20.9■□□□□ 0.94
NEK3-206ENST00000611833 ZC3H6P61129 1189 aaKnown RBP20.9■□□□□ 0.94
NEK3-206ENST00000611833 MTX1Q13505 466 aa20.9■□□□□ 0.94
NEK3-206ENST00000611833 CUL4AQ13619 759 aa20.9■□□□□ 0.94
NEK3-206ENST00000611833 KSR2Q6VAB6 950 aa20.9■□□□□ 0.94
NEK3-206ENST00000611833 CNTROBQ8N137 903 aa20.9■□□□□ 0.94
NEK3-206ENST00000611833 UPF3BQ9BZI7 483 aaKnown RBP20.9■□□□□ 0.94
NEK3-206ENST00000611833 NASPP49321 788 aaPredicted RBP20.9■□□□□ 0.94
NEK3-206ENST00000611833 IL17RAQ96F46 866 aa20.9■□□□□ 0.94
NEK3-206ENST00000611833 ALS2Q96Q42 1657 aa20.9■□□□□ 0.94
NEK3-206ENST00000611833 ALDH1L1O75891 902 aa20.89■□□□□ 0.94
NEK3-206ENST00000611833 ANP32BQ92688 251 aaKnown RBP20.89■□□□□ 0.94
NEK3-206ENST00000611833 INTS4Q96HW7 963 aaKnown RBP20.89■□□□□ 0.94
NEK3-206ENST00000611833 C19orf44Q9H6X5 657 aa20.89■□□□□ 0.94
NEK3-206ENST00000611833 C9orf78Q9NZ63 289 aaPredicted RBP20.89■□□□□ 0.94
NEK3-206ENST00000611833 MST1RQ04912 1400 aa20.89■□□□□ 0.94
NEK3-206ENST00000611833 HSPA4P34932 840 aa20.89■□□□□ 0.93
NEK3-206ENST00000611833 ZNF445P59923 1031 aa20.89■□□□□ 0.93
NEK3-206ENST00000611833 CWF19L2Q2TBE0 894 aaKnown RBP20.89■□□□□ 0.93
NEK3-206ENST00000611833 ZSCAN23Q3MJ62 389 aa20.89■□□□□ 0.93
NEK3-206ENST00000611833 LMTK3Q96Q04 1460 aa20.89■□□□□ 0.93
NEK3-206ENST00000611833 CLCN1P35523 988 aa20.87■□□□□ 0.93
NEK3-206ENST00000611833 HYPKQ9NX55 129 aa20.87■□□□□ 0.93
NEK3-206ENST00000611833 SGSM2O43147 1006 aa20.87■□□□□ 0.93
NEK3-206ENST00000611833 BRD1O95696 1058 aa20.86■□□□□ 0.93
NEK3-206ENST00000611833 KIAA1211Q6ZU35 1233 aa20.86■□□□□ 0.93
NEK3-206ENST00000611833 GPT2Q8TD30 523 aa20.86■□□□□ 0.93
NEK3-206ENST00000611833 CHAMP1Q96JM3 812 aa20.86■□□□□ 0.93
NEK3-206ENST00000611833 USP42Q9H9J4 1324 aaKnown RBP20.86■□□□□ 0.93
NEK3-206ENST00000611833 CRYBG1Q9Y4K1 1723 aa20.86■□□□□ 0.93
NEK3-206ENST00000611833 CLASRPQ8N2M8 674 aaKnown RBP20.86■□□□□ 0.93
NEK3-206ENST00000611833 HDAC5Q9UQL6 1122 aa20.86■□□□□ 0.93
NEK3-206ENST00000611833 ESPNB1AK53 854 aa20.85■□□□□ 0.93
NEK3-206ENST00000611833 CCDC173Q0VFZ6 552 aa20.85■□□□□ 0.93
NEK3-206ENST00000611833 PDIA6Q15084 440 aa20.85■□□□□ 0.93
NEK3-206ENST00000611833 DDX21Q9NR30 783 aaKnown RBP eCLIP20.85■□□□□ 0.93
NEK3-206ENST00000611833 RAD50Q92878 1312 aa20.85■□□□□ 0.93
NEK3-206ENST00000611833 GLRX3O76003 335 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms