RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 GJB2P29033 226 aa14.66□□□□□ -0.06
CDH1-212ENST00000611625 RRP12Q5JTH9 1297 aaKnown RBP14.66□□□□□ -0.06
CDH1-212ENST00000611625 TMX4Q9H1E5 349 aaPredicted RBP14.66□□□□□ -0.06
CDH1-212ENST00000611625 ATP8B2P98198 1209 aa14.65□□□□□ -0.06
CDH1-212ENST00000611625 DHX8Q14562 1220 aaKnown RBP14.65□□□□□ -0.06
CDH1-212ENST00000611625 YTHDC2Q9H6S0 1430 aaKnown RBP14.65□□□□□ -0.06
CDH1-212ENST00000611625 SERPINC1P01008 464 aa14.65□□□□□ -0.06
CDH1-212ENST00000611625 RIMS2Q9UQ26 1411 aa14.65□□□□□ -0.06
CDH1-212ENST00000611625 UBE2HP62256 183 aa14.65□□□□□ -0.06
CDH1-212ENST00000611625 MYD88Q99836 296 aa14.65□□□□□ -0.06
CDH1-212ENST00000611625 HYPKQ9NX55 129 aa14.65□□□□□ -0.06
CDH1-212ENST00000611625 USP26Q9BXU7 913 aa14.64□□□□□ -0.07
CDH1-212ENST00000611625 ANXA1P04083 346 aa14.64□□□□□ -0.07
CDH1-212ENST00000611625 MAP3K2Q9Y2U5 619 aa14.64□□□□□ -0.07
CDH1-212ENST00000611625 TTC21AQ8NDW8 1320 aa14.64□□□□□ -0.07
CDH1-212ENST00000611625 ZGPATQ8N5A5 531 aaKnown RBP14.64□□□□□ -0.07
CDH1-212ENST00000611625 SBNO2Q9Y2G9 1366 aa14.63□□□□□ -0.07
CDH1-212ENST00000611625 ADCY5O95622 1261 aa14.63□□□□□ -0.07
CDH1-212ENST00000611625 CKAP2LQ8IYA6 745 aa14.63□□□□□ -0.07
CDH1-212ENST00000611625 U3KPZ7 1027 aaPredicted RBP14.63□□□□□ -0.07
CDH1-212ENST00000611625 KDM5AP29375 1690 aaKnown RBP14.63□□□□□ -0.07
CDH1-212ENST00000611625 FAM177BA6PVY3 158 aa14.63□□□□□ -0.07
CDH1-212ENST00000611625 G3V3G9 751 aa14.63□□□□□ -0.07
CDH1-212ENST00000611625 ZSCAN22P10073 491 aaPredicted RBP14.63□□□□□ -0.07
CDH1-212ENST00000611625 HCLS1P14317 486 aaPredicted RBP14.63□□□□□ -0.07
CDH1-212ENST00000611625 UVSSAQ2YD98 709 aa14.63□□□□□ -0.07
CDH1-212ENST00000611625 DCAF8Q5TAQ9 597 aa14.63□□□□□ -0.07
CDH1-212ENST00000611625 TOM1L2Q6ZVM7 507 aa14.63□□□□□ -0.07
CDH1-212ENST00000611625 MTHFSDQ2M296 383 aaKnown RBP14.63□□□□□ -0.07
CDH1-212ENST00000611625 TRIM22Q8IYM9 498 aa14.63□□□□□ -0.07
CDH1-212ENST00000611625 ZSCAN25Q6NSZ9 544 aa14.62□□□□□ -0.07
CDH1-212ENST00000611625 DDX19AQ9NUU7 478 aaKnown RBP14.62□□□□□ -0.07
CDH1-212ENST00000611625 UHRF1BP1LA0JNW5 1464 aa14.62□□□□□ -0.07
CDH1-212ENST00000611625 PRIM1P49642 420 aaKnown RBP14.62□□□□□ -0.07
CDH1-212ENST00000611625 VPS53Q5VIR6 699 aa14.62□□□□□ -0.07
CDH1-212ENST00000611625 CEBPAP49715 358 aaPredicted RBP14.62□□□□□ -0.07
CDH1-212ENST00000611625 STRN4Q9NRL3 753 aa14.62□□□□□ -0.07
CDH1-212ENST00000611625 ABCA8O94911 1581 aa14.62□□□□□ -0.07
CDH1-212ENST00000611625 CDKL5O76039 1030 aa14.61□□□□□ -0.07
CDH1-212ENST00000611625 TFIP11Q9UBB9 837 aaKnown RBP14.61□□□□□ -0.07
CDH1-212ENST00000611625 IMMTQ16891 758 aaKnown RBP14.61□□□□□ -0.07
CDH1-212ENST00000611625 ATP10AO60312 1499 aa14.61□□□□□ -0.07
CDH1-212ENST00000611625 PDCL3Q9H2J4 239 aa14.61□□□□□ -0.07
CDH1-212ENST00000611625 FILIP1LQ4L180 1135 aa14.61□□□□□ -0.07
CDH1-212ENST00000611625 PDCL2Q8N4E4 241 aa14.61□□□□□ -0.07
CDH1-212ENST00000611625 TNRQ92752 1358 aa14.61□□□□□ -0.07
CDH1-212ENST00000611625 IL13P35225 146 aa14.6□□□□□ -0.07
CDH1-212ENST00000611625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.6□□□□□ -0.07
CDH1-212ENST00000611625 MSH6P52701 1360 aa14.6□□□□□ -0.07
CDH1-212ENST00000611625 ZMYM3Q14202 1370 aa14.6□□□□□ -0.07
CDH1-212ENST00000611625 OTUD7AQ8TE49 926 aaPredicted RBP14.6□□□□□ -0.07
CDH1-212ENST00000611625 SAMD9LQ8IVG5 1584 aa14.6□□□□□ -0.07
CDH1-212ENST00000611625 FOXO3O43524 673 aa14.6□□□□□ -0.07
CDH1-212ENST00000611625 HMGB1P09429 215 aaKnown RBP14.6□□□□□ -0.07
CDH1-212ENST00000611625 USP48Q86UV5 1035 aa14.6□□□□□ -0.07
CDH1-212ENST00000611625 NACAP1Q9BZK3 213 aa14.6□□□□□ -0.07
CDH1-212ENST00000611625 ANO10Q9NW15 660 aa14.6□□□□□ -0.07
CDH1-212ENST00000611625 CHPF2Q9P2E5 772 aa14.6□□□□□ -0.07
CDH1-212ENST00000611625 CCDC85AQ96PX6 553 aaPredicted RBP14.6□□□□□ -0.07
CDH1-212ENST00000611625 PRDM11Q9NQV5 511 aa14.6□□□□□ -0.07
CDH1-212ENST00000611625 PKNOX2Q96KN3 472 aa14.59□□□□□ -0.07
CDH1-212ENST00000611625 CNPY2Q9Y2B0 182 aa14.59□□□□□ -0.07
CDH1-212ENST00000611625 SYNMO15061 1565 aa14.59□□□□□ -0.07
CDH1-212ENST00000611625 CBFA2T2O43439 604 aa14.59□□□□□ -0.07
CDH1-212ENST00000611625 IFIT1P09914 478 aaKnown RBP14.59□□□□□ -0.07
CDH1-212ENST00000611625 FLT4P35916 1363 aa14.59□□□□□ -0.07
CDH1-212ENST00000611625 CCDC69A6NI79 296 aa14.59□□□□□ -0.07
CDH1-212ENST00000611625 HSP90B2PQ58FF3 399 aa14.59□□□□□ -0.07
CDH1-212ENST00000611625 GIMAP6Q6P9H5 292 aa14.59□□□□□ -0.07
CDH1-212ENST00000611625 NCKAP5LQ9HCH0 1330 aa14.59□□□□□ -0.07
CDH1-212ENST00000611625 ERVK-7P63135 1459 aa14.59□□□□□ -0.07
CDH1-212ENST00000611625 ACBD3Q9H3P7 528 aa14.59□□□□□ -0.07
CDH1-212ENST00000611625 TTLL5Q6EMB2 1281 aa14.58□□□□□ -0.07
CDH1-212ENST00000611625 RRAGDQ9NQL2 400 aaPredicted RBP14.58□□□□□ -0.07
CDH1-212ENST00000611625 ZKSCAN5Q9Y2L8 839 aa14.58□□□□□ -0.07
CDH1-212ENST00000611625 A0A087WZG4 1122 aa14.58□□□□□ -0.08
CDH1-212ENST00000611625 SMTNL1A8MU46 457 aa14.58□□□□□ -0.08
CDH1-212ENST00000611625 DACH1Q9UI36 760 aa14.58□□□□□ -0.08
CDH1-212ENST00000611625 KDM5DQ9BY66 1539 aa14.58□□□□□ -0.08
CDH1-212ENST00000611625 CHMLP26374 656 aa14.58□□□□□ -0.08
CDH1-212ENST00000611625 NECAB1Q8N987 351 aa14.58□□□□□ -0.08
CDH1-212ENST00000611625 HMG20BQ9P0W2 317 aa14.58□□□□□ -0.08
CDH1-212ENST00000611625 CLIP2Q9UDT6 1046 aa14.58□□□□□ -0.08
CDH1-212ENST00000611625 PRDM15P57071 1507 aaPredicted RBP14.58□□□□□ -0.08
CDH1-212ENST00000611625 CTAGE5O15320 804 aa14.58□□□□□ -0.08
CDH1-212ENST00000611625 BRPF1P55201 1214 aaPredicted RBP14.58□□□□□ -0.08
CDH1-212ENST00000611625 GUCY1B3Q02153 619 aa14.58□□□□□ -0.08
CDH1-212ENST00000611625 INTS4Q96HW7 963 aaKnown RBP14.58□□□□□ -0.08
CDH1-212ENST00000611625 SMARCE1Q969G3 411 aa14.57□□□□□ -0.08
CDH1-212ENST00000611625 IDH1O75874 414 aaKnown RBP14.57□□□□□ -0.08
CDH1-212ENST00000611625 RBM33Q96EV2 1170 aaKnown RBP14.57□□□□□ -0.08
CDH1-212ENST00000611625 BCORL1Q5H9F3 1711 aa14.57□□□□□ -0.08
CDH1-212ENST00000611625 STK11IPQ8N1F8 1099 aa14.57□□□□□ -0.08
CDH1-212ENST00000611625 PTPN14Q15678 1187 aa14.57□□□□□ -0.08
CDH1-212ENST00000611625 C8orf76Q96K31 380 aa14.57□□□□□ -0.08
CDH1-212ENST00000611625 RBM8AQ9Y5S9 174 aaKnown RBP14.57□□□□□ -0.08
CDH1-212ENST00000611625 ZNF165P49910 485 aa14.56□□□□□ -0.08
CDH1-212ENST00000611625 G2E3Q7L622 706 aa14.56□□□□□ -0.08
CDH1-212ENST00000611625 SOS1Q07889 1333 aaPredicted RBP14.56□□□□□ -0.08
CDH1-212ENST00000611625 PLA2R1Q13018 1463 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms