RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 ZNF530Q6P9A1 599 aaPredicted RBP23.32■■□□□ 1.32
SEMA3B-210ENST00000611067 IL17REQ8NFR9 667 aa23.32■■□□□ 1.32
SEMA3B-210ENST00000611067 API5Q9BZZ5 524 aaKnown RBP23.32■■□□□ 1.32
SEMA3B-210ENST00000611067 DCTPP1Q9H773 170 aa23.32■■□□□ 1.32
SEMA3B-210ENST00000611067 MIS18AQ9NYP9 233 aa23.32■■□□□ 1.32
SEMA3B-210ENST00000611067 INTS3Q68E01 1043 aaKnown RBP23.31■■□□□ 1.32
SEMA3B-210ENST00000611067 AKAP4Q5JQC9 854 aa23.31■■□□□ 1.32
SEMA3B-210ENST00000611067 PRDM11Q9NQV5 511 aa23.31■■□□□ 1.32
SEMA3B-210ENST00000611067 C1orf141Q5JVX7 400 aa23.3■■□□□ 1.32
SEMA3B-210ENST00000611067 PRIM1P49642 420 aaKnown RBP23.3■■□□□ 1.32
SEMA3B-210ENST00000611067 PKP1Q13835 747 aa23.3■■□□□ 1.32
SEMA3B-210ENST00000611067 RAPGEF4Q8WZA2 1011 aa23.3■■□□□ 1.32
SEMA3B-210ENST00000611067 LTBP4Q8N2S1 1624 aa23.3■■□□□ 1.32
SEMA3B-210ENST00000611067 KRT24Q2M2I5 525 aa23.29■■□□□ 1.32
SEMA3B-210ENST00000611067 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.29■■□□□ 1.32
SEMA3B-210ENST00000611067 ST18O60284 1047 aa23.29■■□□□ 1.32
SEMA3B-210ENST00000611067 TAF7Q15545 349 aaPredicted RBP23.29■■□□□ 1.32
SEMA3B-210ENST00000611067 MAP7D2Q96T17 732 aa23.29■■□□□ 1.32
SEMA3B-210ENST00000611067 ABCA3Q99758 1704 aa23.28■■□□□ 1.32
SEMA3B-210ENST00000611067 BABAM1Q9NWV8 329 aa23.28■■□□□ 1.32
SEMA3B-210ENST00000611067 R3HCC1Q9Y3T6 440 aaKnown RBP23.28■■□□□ 1.32
SEMA3B-210ENST00000611067 CEMIPQ8WUJ3 1361 aa23.28■■□□□ 1.32
SEMA3B-210ENST00000611067 ROBO1Q9Y6N7 1651 aa23.27■■□□□ 1.32
SEMA3B-210ENST00000611067 PRPF40AO75400 957 aaKnown RBP23.27■■□□□ 1.32
SEMA3B-210ENST00000611067 GPT2Q8TD30 523 aa23.27■■□□□ 1.32
SEMA3B-210ENST00000611067 MCM5P33992 734 aa23.26■■□□□ 1.31
SEMA3B-210ENST00000611067 ZKSCAN5Q9Y2L8 839 aa23.26■■□□□ 1.31
SEMA3B-210ENST00000611067 LRSAM1Q6UWE0 723 aa23.25■■□□□ 1.31
SEMA3B-210ENST00000611067 TATP17735 454 aaPredicted RBP23.25■■□□□ 1.31
SEMA3B-210ENST00000611067 CASC1Q6TDU7 716 aa23.25■■□□□ 1.31
SEMA3B-210ENST00000611067 ZGPATQ8N5A5 531 aaKnown RBP23.24■■□□□ 1.31
SEMA3B-210ENST00000611067 ZDHHC9Q9Y397 364 aa23.24■■□□□ 1.31
SEMA3B-210ENST00000611067 TEFQ10587 303 aa23.24■■□□□ 1.31
SEMA3B-210ENST00000611067 CSPP1Q1MSJ5 1256 aa23.24■■□□□ 1.31
SEMA3B-210ENST00000611067 C16orf71Q8IYS4 520 aaPredicted RBP23.24■■□□□ 1.31
SEMA3B-210ENST00000611067 RBM10P98175 930 aaKnown RBP23.23■■□□□ 1.31
SEMA3B-210ENST00000611067 LGR6Q9HBX8 967 aa23.23■■□□□ 1.31
SEMA3B-210ENST00000611067 RBM27Q9P2N5 1060 aaKnown RBP23.23■■□□□ 1.31
SEMA3B-210ENST00000611067 MPRIPQ6WCQ1 1025 aa23.22■■□□□ 1.31
SEMA3B-210ENST00000611067 ANKRD44Q8N8A2 993 aa23.22■■□□□ 1.31
SEMA3B-210ENST00000611067 SDSP20132 328 aa23.22■■□□□ 1.31
SEMA3B-210ENST00000611067 PLEKHG2Q9H7P9 1386 aa23.21■■□□□ 1.31
SEMA3B-210ENST00000611067 TMEM63CQ9P1W3 806 aa23.21■■□□□ 1.31
SEMA3B-210ENST00000611067 OVOS2A0A0G2JMS6 1433 aa23.21■■□□□ 1.31
SEMA3B-210ENST00000611067 SPG7Q9UQ90 795 aa23.21■■□□□ 1.31
SEMA3B-210ENST00000611067 AHDC1Q5TGY3 1603 aaPredicted RBP23.2■■□□□ 1.31
SEMA3B-210ENST00000611067 MEGF6O75095 1541 aa23.2■■□□□ 1.31
SEMA3B-210ENST00000611067 REC8O95072 547 aa23.2■■□□□ 1.3
SEMA3B-210ENST00000611067 RPAP2Q8IXW5 612 aaPredicted RBP23.2■■□□□ 1.3
SEMA3B-210ENST00000611067 CCDC39Q9UFE4 941 aa23.2■■□□□ 1.3
SEMA3B-210ENST00000611067 ATP10DQ9P241 1426 aa23.2■■□□□ 1.3
SEMA3B-210ENST00000611067 WDR17Q8IZU2 1322 aa23.2■■□□□ 1.3
SEMA3B-210ENST00000611067 UQCRHLA0A096LP55 91 aa23.2■■□□□ 1.3
SEMA3B-210ENST00000611067 RNMTO43148 476 aaKnown RBP23.2■■□□□ 1.3
SEMA3B-210ENST00000611067 UQCRHP07919 91 aa23.2■■□□□ 1.3
SEMA3B-210ENST00000611067 SOS1Q07889 1333 aaPredicted RBP23.19■■□□□ 1.3
SEMA3B-210ENST00000611067 FAM13BQ9NYF5 915 aa23.19■■□□□ 1.3
SEMA3B-210ENST00000611067 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.19■■□□□ 1.3
SEMA3B-210ENST00000611067 COL5A2P05997 1499 aaPredicted RBP23.19■■□□□ 1.3
SEMA3B-210ENST00000611067 OTUD7AQ8TE49 926 aaPredicted RBP23.19■■□□□ 1.3
SEMA3B-210ENST00000611067 MBD3O95983 291 aa23.18■■□□□ 1.3
SEMA3B-210ENST00000611067 TOM1L2Q6ZVM7 507 aa23.18■■□□□ 1.3
SEMA3B-210ENST00000611067 SYCE3A1L190 88 aa23.17■■□□□ 1.3
SEMA3B-210ENST00000611067 DYNC1I1O14576 645 aa23.17■■□□□ 1.3
SEMA3B-210ENST00000611067 MTERF4Q7Z6M4 381 aaKnown RBP23.17■■□□□ 1.3
SEMA3B-210ENST00000611067 STK31Q9BXU1 1019 aa23.17■■□□□ 1.3
SEMA3B-210ENST00000611067 SLC4A2P04920 1241 aa23.16■■□□□ 1.3
SEMA3B-210ENST00000611067 CEP85Q6P2H3 762 aa23.16■■□□□ 1.3
SEMA3B-210ENST00000611067 KDM3BQ7LBC6 1761 aa23.16■■□□□ 1.3
SEMA3B-210ENST00000611067 BTBD11A6QL63 1104 aa23.16■■□□□ 1.3
SEMA3B-210ENST00000611067 ERC2O15083 957 aa23.15■■□□□ 1.3
SEMA3B-210ENST00000611067 PTPRCP08575 1304 aa23.15■■□□□ 1.3
SEMA3B-210ENST00000611067 CCDC30Q5VVM6 783 aa23.15■■□□□ 1.3
SEMA3B-210ENST00000611067 NSFL1CQ9UNZ2 370 aaKnown RBP23.15■■□□□ 1.3
SEMA3B-210ENST00000611067 IFNL2Q8IZJ0 200 aa23.14■■□□□ 1.29
SEMA3B-210ENST00000611067 PKD1L3Q7Z443 1732 aa23.14■■□□□ 1.29
SEMA3B-210ENST00000611067 EVA1CP58658 441 aa23.13■■□□□ 1.29
SEMA3B-210ENST00000611067 ADAMTS7Q9UKP4 1686 aa23.13■■□□□ 1.29
SEMA3B-210ENST00000611067 PHKG2P15735 406 aa23.13■■□□□ 1.29
SEMA3B-210ENST00000611067 SASS6Q6UVJ0 657 aa23.13■■□□□ 1.29
SEMA3B-210ENST00000611067 STRN4Q9NRL3 753 aa23.13■■□□□ 1.29
SEMA3B-210ENST00000611067 PARP4Q9UKK3 1724 aaKnown RBP23.12■■□□□ 1.29
SEMA3B-210ENST00000611067 RGS12O14924 1447 aa23.12■■□□□ 1.29
SEMA3B-210ENST00000611067 SMARCA5O60264 1052 aaPredicted RBP23.11■■□□□ 1.29
SEMA3B-210ENST00000611067 MCM2P49736 904 aa23.11■■□□□ 1.29
SEMA3B-210ENST00000611067 EIF4A1P60842 406 aaKnown RBP23.11■■□□□ 1.29
SEMA3B-210ENST00000611067 CHAMP1Q96JM3 812 aa23.11■■□□□ 1.29
SEMA3B-210ENST00000611067 CHMP4AQ9BY43 222 aa23.11■■□□□ 1.29
SEMA3B-210ENST00000611067 SCN11AQ9UI33 1791 aa23.1■■□□□ 1.29
SEMA3B-210ENST00000611067 COL22A1Q8NFW1 1626 aaPredicted RBP23.1■■□□□ 1.29
SEMA3B-210ENST00000611067 TOM1O60784 492 aa23.1■■□□□ 1.29
SEMA3B-210ENST00000611067 BRD1O95696 1058 aa23.1■■□□□ 1.29
SEMA3B-210ENST00000611067 TMX3Q96JJ7 454 aa23.1■■□□□ 1.29
SEMA3B-210ENST00000611067 CARD10Q9BWT7 1032 aa23.1■■□□□ 1.29
SEMA3B-210ENST00000611067 CACNA1FO60840 1977 aa23.1■■□□□ 1.29
SEMA3B-210ENST00000611067 HOXB7P09629 217 aa23.1■■□□□ 1.29
SEMA3B-210ENST00000611067 OSBPL3Q9H4L5 887 aa23.1■■□□□ 1.29
SEMA3B-210ENST00000611067 SIPA1L3O60292 1781 aaPredicted RBP23.1■■□□□ 1.29
SEMA3B-210ENST00000611067 HDGFL1Q5TGJ6 251 aa23.09■■□□□ 1.29
SEMA3B-210ENST00000611067 PHLPP1O60346 1717 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms