RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 SOS1Q07889 1333 aaPredicted RBP17.64■□□□□ 0.41
SENP3-209ENST00000610454 COL15A1P39059 1388 aa17.64■□□□□ 0.41
SENP3-209ENST00000610454 GYS1P13807 737 aa17.63■□□□□ 0.41
SENP3-209ENST00000610454 CANXP27824 592 aaKnown RBP17.63■□□□□ 0.41
SENP3-209ENST00000610454 RIPK4P57078 832 aa17.63■□□□□ 0.41
SENP3-209ENST00000610454 CCDC146Q8IYE0 955 aa17.63■□□□□ 0.41
SENP3-209ENST00000610454 PELP1Q8IZL8 1130 aaKnown RBP17.63■□□□□ 0.41
SENP3-209ENST00000610454 CD2APQ9Y5K6 639 aa17.63■□□□□ 0.41
SENP3-209ENST00000610454 USP42Q9H9J4 1324 aaKnown RBP17.63■□□□□ 0.41
SENP3-209ENST00000610454 ANP32CO43423 234 aa17.62■□□□□ 0.41
SENP3-209ENST00000610454 KCNQ3O43525 872 aa17.62■□□□□ 0.41
SENP3-209ENST00000610454 GPR162Q16538 588 aa17.62■□□□□ 0.41
SENP3-209ENST00000610454 RUNDC1Q96C34 613 aa17.62■□□□□ 0.41
SENP3-209ENST00000610454 ZNF330Q9Y3S2 320 aaPredicted RBP17.62■□□□□ 0.41
SENP3-209ENST00000610454 PARP3Q9Y6F1 533 aa17.62■□□□□ 0.41
SENP3-209ENST00000610454 SNRPA1P09661 255 aaKnown RBP17.61■□□□□ 0.41
SENP3-209ENST00000610454 TMPOP42166 694 aaKnown RBP17.61■□□□□ 0.41
SENP3-209ENST00000610454 NLGN2Q8NFZ4 835 aa17.61■□□□□ 0.41
SENP3-209ENST00000610454 SRP68Q9UHB9 627 aaKnown RBP17.61■□□□□ 0.41
SENP3-209ENST00000610454 A0A087WZG4 1122 aa17.6■□□□□ 0.41
SENP3-209ENST00000610454 NEUROD2Q15784 382 aa17.6■□□□□ 0.41
SENP3-209ENST00000610454 THUMPD2Q9BTF0 503 aaKnown RBP17.6■□□□□ 0.41
SENP3-209ENST00000610454 ADAMTS8Q9UP79 889 aa17.6■□□□□ 0.41
SENP3-209ENST00000610454 KDM3BQ7LBC6 1761 aa17.59■□□□□ 0.41
SENP3-209ENST00000610454 USPL1Q5W0Q7 1092 aa17.59■□□□□ 0.41
SENP3-209ENST00000610454 MIS18AQ9NYP9 233 aa17.59■□□□□ 0.41
SENP3-209ENST00000610454 NARFQ9UHQ1 456 aa17.58■□□□□ 0.4
SENP3-209ENST00000610454 RRP7AQ9Y3A4 280 aaKnown RBP17.58■□□□□ 0.4
SENP3-209ENST00000610454 IL6STP40189 918 aaPredicted RBP17.57■□□□□ 0.4
SENP3-209ENST00000610454 EIF5P55010 431 aaKnown RBP17.57■□□□□ 0.4
SENP3-209ENST00000610454 FKBP8Q14318 412 aa17.57■□□□□ 0.4
SENP3-209ENST00000610454 TSPYL4Q9UJ04 414 aa17.57■□□□□ 0.4
SENP3-209ENST00000610454 LAMB4A4D0S4 1761 aa17.57■□□□□ 0.4
SENP3-209ENST00000610454 A1BGP04217 495 aa17.56■□□□□ 0.4
SENP3-209ENST00000610454 USP16Q9Y5T5 823 aa17.56■□□□□ 0.4
SENP3-209ENST00000610454 GOLGB1Q14789 3259 aaKnown RBP17.56■□□□□ 0.4
SENP3-209ENST00000610454 PRAMEF22A3QJZ6 481 aa17.54■□□□□ 0.4
SENP3-209ENST00000610454 YY1P25490 414 aa17.54■□□□□ 0.4
SENP3-209ENST00000610454 SCN7AQ01118 1682 aa17.54■□□□□ 0.4
SENP3-209ENST00000610454 KIF13BQ9NQT8 1826 aa17.54■□□□□ 0.4
SENP3-209ENST00000610454 CHD4Q14839 1912 aa17.53■□□□□ 0.4
SENP3-209ENST00000610454 MRS2Q9HD23 443 aa17.53■□□□□ 0.4
SENP3-209ENST00000610454 BABAM1Q9NWV8 329 aa17.53■□□□□ 0.4
SENP3-209ENST00000610454 TBC1D2BQ9UPU7 963 aa17.53■□□□□ 0.4
SENP3-209ENST00000610454 C10orf71Q711Q0 1435 aa17.53■□□□□ 0.4
SENP3-209ENST00000610454 GRIN3BO60391 1043 aa17.52■□□□□ 0.4
SENP3-209ENST00000610454 EIF4A1P60842 406 aaKnown RBP17.52■□□□□ 0.4
SENP3-209ENST00000610454 DZIP3Q86Y13 1208 aaKnown RBP17.52■□□□□ 0.4
SENP3-209ENST00000610454 LAS1LQ9Y4W2 734 aaKnown RBP17.52■□□□□ 0.4
SENP3-209ENST00000610454 UTRNP46939 3433 aa17.52■□□□□ 0.4
SENP3-209ENST00000610454 GIGYF1O75420 1035 aaPredicted RBP17.51■□□□□ 0.39
SENP3-209ENST00000610454 PIP4K2AP48426 406 aaPredicted RBP17.51■□□□□ 0.39
SENP3-209ENST00000610454 TGFB2P61812 414 aa17.51■□□□□ 0.39
SENP3-209ENST00000610454 DDR1Q08345 913 aa17.51■□□□□ 0.39
SENP3-209ENST00000610454 POLRMTO00411 1230 aaKnown RBP17.5■□□□□ 0.39
SENP3-209ENST00000610454 APAF1O14727 1248 aa17.5■□□□□ 0.39
SENP3-209ENST00000610454 TM4SF1P30408 202 aa17.5■□□□□ 0.39
SENP3-209ENST00000610454 NFIXQ14938 502 aa17.5■□□□□ 0.39
SENP3-209ENST00000610454 BICDL1Q6ZP65 573 aa17.5■□□□□ 0.39
SENP3-209ENST00000610454 N4BP2Q86UW6 1770 aaPredicted RBP17.5■□□□□ 0.39
SENP3-209ENST00000610454 BCORQ6W2J9 1755 aa17.49■□□□□ 0.39
SENP3-209ENST00000610454 NPHP1O15259 732 aa17.49■□□□□ 0.39
SENP3-209ENST00000610454 CALD1Q05682 793 aaKnown RBP17.49■□□□□ 0.39
SENP3-209ENST00000610454 WWC3Q9ULE0 1092 aa17.49■□□□□ 0.39
SENP3-209ENST00000610454 TRIM35Q9UPQ4 493 aa17.49■□□□□ 0.39
SENP3-209ENST00000610454 ZNF652Q9Y2D9 606 aa17.49■□□□□ 0.39
SENP3-209ENST00000610454 PXDNLA1KZ92 1463 aa17.49■□□□□ 0.39
SENP3-209ENST00000610454 YBX3P16989 372 aaKnown RBP eCLIP17.48■□□□□ 0.396e-8■■□□□ 13.5
SENP3-209ENST00000610454 CCDC184Q52MB2 194 aa17.48■□□□□ 0.39
SENP3-209ENST00000610454 BCL2L12Q9HB09 334 aa17.48■□□□□ 0.39
SENP3-209ENST00000610454 AFDNP55196 1824 aaKnown RBP17.48■□□□□ 0.39
SENP3-209ENST00000610454 A0A0G2JLW4 131 aa17.47■□□□□ 0.39
SENP3-209ENST00000610454 SERPINB2P05120 415 aa17.47■□□□□ 0.39
SENP3-209ENST00000610454 CARMIL3Q8ND23 1372 aa17.47■□□□□ 0.39
SENP3-209ENST00000610454 NBPF26B4DH59 902 aa17.46■□□□□ 0.39
SENP3-209ENST00000610454 CAMTA2O94983 1202 aa17.46■□□□□ 0.39
SENP3-209ENST00000610454 TBC1D9BQ66K14 1250 aa17.46■□□□□ 0.39
SENP3-209ENST00000610454 NBPF10Q6P3W6 841 aaKnown RBP17.46■□□□□ 0.39
SENP3-209ENST00000610454 NGEFQ8N5V2 710 aa17.46■□□□□ 0.39
SENP3-209ENST00000610454 NBPF15Q8N660 670 aa17.46■□□□□ 0.39
SENP3-209ENST00000610454 SETDB2Q96T68 719 aa17.46■□□□□ 0.39
SENP3-209ENST00000610454 KIAA1551Q9HCM1 1747 aa17.46■□□□□ 0.39
SENP3-209ENST00000610454 ERBB4Q15303 1308 aa17.46■□□□□ 0.38
SENP3-209ENST00000610454 NRXN2Q9P2S2 1712 aa17.45■□□□□ 0.38
SENP3-209ENST00000610454 CHL1O00533 1208 aa17.45■□□□□ 0.38
SENP3-209ENST00000610454 MYL6BP14649 208 aa17.45■□□□□ 0.38
SENP3-209ENST00000610454 DPEP1P16444 411 aa17.45■□□□□ 0.38
SENP3-209ENST00000610454 EIF2S2P20042 333 aaKnown RBP17.45■□□□□ 0.38
SENP3-209ENST00000610454 KIF6Q6ZMV9 814 aa17.45■□□□□ 0.38
SENP3-209ENST00000610454 CLEC4GQ6UXB4 293 aa17.44■□□□□ 0.38
SENP3-209ENST00000610454 CFAP44Q96MT7 982 aa17.44■□□□□ 0.38
SENP3-209ENST00000610454 BCS1LQ9Y276 419 aa17.44■□□□□ 0.38
SENP3-209ENST00000610454 PIM2Q9P1W9 311 aa17.43■□□□□ 0.38
SENP3-209ENST00000610454 BRCA1P38398 1863 aaKnown RBP17.42■□□□□ 0.38
SENP3-209ENST00000610454 RGL2O15211 777 aa17.42■□□□□ 0.38
SENP3-209ENST00000610454 GNAI1P63096 354 aa17.42■□□□□ 0.38
SENP3-209ENST00000610454 CNBD1Q8NA66 436 aa17.42■□□□□ 0.38
SENP3-209ENST00000610454 ST5P78524 1137 aa17.41■□□□□ 0.38
SENP3-209ENST00000610454 IFT57Q9NWB7 429 aa17.41■□□□□ 0.38
SENP3-209ENST00000610454 CHRNA5P30532 468 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms