RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 NFIXQ14938 502 aa21.42■■□□□ 1.02
HDDC2-203ENST00000608284 TTC5Q8N0Z6 440 aa21.42■■□□□ 1.02
HDDC2-203ENST00000608284 VSIG10Q8N0Z9 540 aa21.42■■□□□ 1.02
HDDC2-203ENST00000608284 KIAA1551Q9HCM1 1747 aa21.42■■□□□ 1.02
HDDC2-203ENST00000608284 KCPQ6ZWJ8 1503 aa21.41■■□□□ 1.02
HDDC2-203ENST00000608284 A0A087WZG4 1122 aa21.41■■□□□ 1.02
HDDC2-203ENST00000608284 VEGFAP15692 232 aaPredicted RBP21.41■■□□□ 1.02
HDDC2-203ENST00000608284 SLC39A6Q13433 755 aa21.41■■□□□ 1.02
HDDC2-203ENST00000608284 NPM2Q86SE8 214 aaKnown RBP21.41■■□□□ 1.02
HDDC2-203ENST00000608284 MYH14Q7Z406 1995 aaKnown RBP21.4■■□□□ 1.02
HDDC2-203ENST00000608284 HMOX1P09601 288 aa21.4■■□□□ 1.02
HDDC2-203ENST00000608284 HTRA3P83110 453 aa21.4■■□□□ 1.02
HDDC2-203ENST00000608284 C2CD5Q86YS7 1000 aa21.4■■□□□ 1.02
HDDC2-203ENST00000608284 CANXP27824 592 aaKnown RBP21.39■■□□□ 1.01
HDDC2-203ENST00000608284 COL15A1P39059 1388 aa21.38■■□□□ 1.01
HDDC2-203ENST00000608284 GLTPD2A6NH11 291 aa21.38■■□□□ 1.01
HDDC2-203ENST00000608284 RASSF7Q02833 373 aa21.38■■□□□ 1.01
HDDC2-203ENST00000608284 DPY19L2Q6NUT2 758 aa21.38■■□□□ 1.01
HDDC2-203ENST00000608284 JMYQ8N9B5 988 aa21.38■■□□□ 1.01
HDDC2-203ENST00000608284 PDZRN3Q9UPQ7 1066 aa21.38■■□□□ 1.01
HDDC2-203ENST00000608284 ZBTB1Q9Y2K1 713 aa21.38■■□□□ 1.01
HDDC2-203ENST00000608284 ARFGEF1Q9Y6D6 1849 aa21.37■■□□□ 1.01
HDDC2-203ENST00000608284 DIAPH1O60610 1272 aaKnown RBP21.37■■□□□ 1.01
HDDC2-203ENST00000608284 BICDL1Q6ZP65 573 aa21.37■■□□□ 1.01
HDDC2-203ENST00000608284 TEX13AQ9BXU3 409 aaPredicted RBP21.37■■□□□ 1.01
HDDC2-203ENST00000608284 NPHP1O15259 732 aa21.36■■□□□ 1.01
HDDC2-203ENST00000608284 PDE6BP35913 854 aa21.35■■□□□ 1.01
HDDC2-203ENST00000608284 MTHFSDQ2M296 383 aaKnown RBP21.35■■□□□ 1.01
HDDC2-203ENST00000608284 ZNF622Q969S3 477 aaKnown RBP eCLIP21.35■■□□□ 1.01
HDDC2-203ENST00000608284 TEFQ10587 303 aa21.34■■□□□ 1.01
HDDC2-203ENST00000608284 BRCA1P38398 1863 aaKnown RBP21.34■■□□□ 1.01
HDDC2-203ENST00000608284 AMER1Q5JTC6 1135 aaPredicted RBP21.33■■□□□ 1.01
HDDC2-203ENST00000608284 ZNF330Q9Y3S2 320 aaPredicted RBP21.33■■□□□ 1.01
HDDC2-203ENST00000608284 CCER1Q8TC90 406 aaPredicted RBP21.32■■□□□ 1
HDDC2-203ENST00000608284 BCL2L12Q9HB09 334 aa21.32■■□□□ 1
HDDC2-203ENST00000608284 COL13A1Q5TAT6 717 aaPredicted RBP21.31■■□□□ 1
HDDC2-203ENST00000608284 TNS4Q8IZW8 715 aa21.31■■□□□ 1
HDDC2-203ENST00000608284 BRIP1Q9BX63 1249 aa21.31■■□□□ 1
HDDC2-203ENST00000608284 TJP1Q07157 1748 aa21.31■■□□□ 1
HDDC2-203ENST00000608284 WDR90Q96KV7 1748 aa21.31■■□□□ 1
HDDC2-203ENST00000608284 EIF5P55010 431 aaKnown RBP21.3■■□□□ 1
HDDC2-203ENST00000608284 GAS2L2Q8NHY3 880 aa21.3■■□□□ 1
HDDC2-203ENST00000608284 SCN11AQ9UI33 1791 aa21.29■■□□□ 1
HDDC2-203ENST00000608284 ERFEQ4G0M1 354 aa21.29■■□□□ 1
HDDC2-203ENST00000608284 CC2D1BQ5T0F9 858 aaKnown RBP21.29■■□□□ 1
HDDC2-203ENST00000608284 SETDB2Q96T68 719 aa21.29■■□□□ 1
HDDC2-203ENST00000608284 ZNF219Q9P2Y4 722 aaPredicted RBP21.29■■□□□ 1
HDDC2-203ENST00000608284 GNAT3A8MTJ3 354 aa21.28■■□□□ 1
HDDC2-203ENST00000608284 U2SURPO15042 1029 aaKnown RBP21.28■■□□□ 1
HDDC2-203ENST00000608284 C21orf2O43822 256 aa21.27■■□□□ 1
HDDC2-203ENST00000608284 CAPN15O75808 1086 aa21.27■■□□□ 1
HDDC2-203ENST00000608284 TBC1D9BQ66K14 1250 aa21.27■■□□□ 1
HDDC2-203ENST00000608284 ZNF790Q6PG37 636 aa21.27■■□□□ 1
HDDC2-203ENST00000608284 FMNL2Q96PY5 1086 aa21.27■■□□□ 1
HDDC2-203ENST00000608284 TNRC6CQ9HCJ0 1690 aaKnown RBP21.27■■□□□ 1
HDDC2-203ENST00000608284 NFKBIEO00221 500 aa21.26■□□□□ 0.99
HDDC2-203ENST00000608284 IL6STP40189 918 aaPredicted RBP21.26■□□□□ 0.99
HDDC2-203ENST00000608284 ST5P78524 1137 aa21.26■□□□□ 0.99
HDDC2-203ENST00000608284 SOGA3Q5TF21 947 aa21.26■□□□□ 0.99
HDDC2-203ENST00000608284 CNKSR1Q969H4 720 aa21.26■□□□□ 0.99
HDDC2-203ENST00000608284 TBC1D2BQ9UPU7 963 aa21.26■□□□□ 0.99
HDDC2-203ENST00000608284 MRC1P22897 1456 aa21.26■□□□□ 0.99
HDDC2-203ENST00000608284 ZNF496Q96IT1 587 aaPredicted RBP21.25■□□□□ 0.99
HDDC2-203ENST00000608284 CARMIL3Q8ND23 1372 aa21.24■□□□□ 0.99
HDDC2-203ENST00000608284 PRELPP51888 382 aa21.24■□□□□ 0.99
HDDC2-203ENST00000608284 CNBD1Q8NA66 436 aa21.24■□□□□ 0.99
HDDC2-203ENST00000608284 TAOK3Q9H2K8 898 aa21.24■□□□□ 0.99
HDDC2-203ENST00000608284 HEG1Q9ULI3 1381 aa21.23■□□□□ 0.99
HDDC2-203ENST00000608284 PRR5LQ6MZQ0 368 aa21.23■□□□□ 0.99
HDDC2-203ENST00000608284 KIF7Q2M1P5 1343 aa21.23■□□□□ 0.99
HDDC2-203ENST00000608284 SBF1O95248 1867 aa21.22■□□□□ 0.99
HDDC2-203ENST00000608284 HSPA1AP0DMV8 641 aaKnown RBP21.22■□□□□ 0.99
HDDC2-203ENST00000608284 HSPA1BP0DMV9 641 aaKnown RBP21.22■□□□□ 0.99
HDDC2-203ENST00000608284 CNGB1Q14028 1251 aaPredicted RBP21.22■□□□□ 0.99
HDDC2-203ENST00000608284 STYK1Q6J9G0 422 aa21.22■□□□□ 0.99
HDDC2-203ENST00000608284 IL17REQ8NFR9 667 aa21.22■□□□□ 0.99
HDDC2-203ENST00000608284 ADAMTS7Q9UKP4 1686 aa21.21■□□□□ 0.99
HDDC2-203ENST00000608284 BTBD11A6QL63 1104 aa21.21■□□□□ 0.99
HDDC2-203ENST00000608284 CCDC24Q8N4L8 307 aa21.21■□□□□ 0.99
HDDC2-203ENST00000608284 A1BGP04217 495 aa21.2■□□□□ 0.98
HDDC2-203ENST00000608284 CHADLQ6NUI6 762 aa21.2■□□□□ 0.98
HDDC2-203ENST00000608284 MASTLQ96GX5 879 aa21.2■□□□□ 0.98
HDDC2-203ENST00000608284 ZNF652Q9Y2D9 606 aa21.2■□□□□ 0.98
HDDC2-203ENST00000608284 IQCA1LA6NCM1 817 aa21.19■□□□□ 0.98
HDDC2-203ENST00000608284 PER1O15534 1290 aaPredicted RBP21.19■□□□□ 0.98
HDDC2-203ENST00000608284 DZIP3Q86Y13 1208 aaKnown RBP21.19■□□□□ 0.98
HDDC2-203ENST00000608284 CFAP53Q96M91 514 aa21.19■□□□□ 0.98
HDDC2-203ENST00000608284 LTBP3Q9NS15 1303 aa21.19■□□□□ 0.98
HDDC2-203ENST00000608284 AFDNP55196 1824 aaKnown RBP21.18■□□□□ 0.98
HDDC2-203ENST00000608284 POTECB2RU33 542 aa21.18■□□□□ 0.98
HDDC2-203ENST00000608284 NBPF5PQ86XG9 351 aaPredicted RBP21.18■□□□□ 0.98
HDDC2-203ENST00000608284 RTF1Q92541 710 aaKnown RBP21.18■□□□□ 0.98
HDDC2-203ENST00000608284 CREBZFQ9NS37 354 aa21.18■□□□□ 0.98
HDDC2-203ENST00000608284 NRXN2Q9P2S2 1712 aa21.18■□□□□ 0.98
HDDC2-203ENST00000608284 PRPF40BQ6NWY9 871 aaKnown RBP21.17■□□□□ 0.98
HDDC2-203ENST00000608284 NUDCQ9Y266 331 aa21.17■□□□□ 0.98
HDDC2-203ENST00000608284 CAMTA2O94983 1202 aa21.16■□□□□ 0.98
HDDC2-203ENST00000608284 SRGNP10124 158 aa21.16■□□□□ 0.98
HDDC2-203ENST00000608284 CLEC4GQ6UXB4 293 aa21.16■□□□□ 0.98
HDDC2-203ENST00000608284 DDNO94850 711 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms