RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 STK31Q9BXU1 1019 aa14.27□□□□□ -0.12
CTCFL-214ENST00000608108 CHMP4AQ9BY43 222 aa14.27□□□□□ -0.12
CTCFL-214ENST00000608108 BCL11BQ9C0K0 894 aaPredicted RBP14.27□□□□□ -0.12
CTCFL-214ENST00000608108 CANXP27824 592 aaKnown RBP14.26□□□□□ -0.13
CTCFL-214ENST00000608108 MRPL50Q8N5N7 158 aaKnown RBP14.26□□□□□ -0.13
CTCFL-214ENST00000608108 CICQ96RK0 1608 aaPredicted RBP14.26□□□□□ -0.13
CTCFL-214ENST00000608108 KIF16BQ96L93 1317 aa14.26□□□□□ -0.13
CTCFL-214ENST00000608108 LY75O60449 1722 aa14.26□□□□□ -0.13
CTCFL-214ENST00000608108 TRIM37O94972 964 aa14.26□□□□□ -0.13
CTCFL-214ENST00000608108 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.26□□□□□ -0.13
CTCFL-214ENST00000608108 FRAT1Q92837 279 aaPredicted RBP14.26□□□□□ -0.13
CTCFL-214ENST00000608108 USP16Q9Y5T5 823 aa14.26□□□□□ -0.13
CTCFL-214ENST00000608108 ZNF831Q5JPB2 1677 aa14.26□□□□□ -0.13
CTCFL-214ENST00000608108 PLIN1O60240 522 aa14.25□□□□□ -0.13
CTCFL-214ENST00000608108 BRPF1P55201 1214 aaPredicted RBP14.25□□□□□ -0.13
CTCFL-214ENST00000608108 SLC4A9Q96Q91 983 aa14.25□□□□□ -0.13
CTCFL-214ENST00000608108 CHPF2Q9P2E5 772 aa14.25□□□□□ -0.13
CTCFL-214ENST00000608108 LOC102724428A0A0B4J2F2 783 aa14.24□□□□□ -0.13
CTCFL-214ENST00000608108 DSG3P32926 999 aa14.24□□□□□ -0.13
CTCFL-214ENST00000608108 SIK1P57059 783 aa14.24□□□□□ -0.13
CTCFL-214ENST00000608108 NOB1Q9ULX3 412 aaKnown RBP14.24□□□□□ -0.13
CTCFL-214ENST00000608108 COL5A3P25940 1745 aaPredicted RBP14.24□□□□□ -0.13
CTCFL-214ENST00000608108 TNS1Q9HBL0 1735 aaKnown RBP14.24□□□□□ -0.13
CTCFL-214ENST00000608108 ATP6V1AP38606 617 aa14.23□□□□□ -0.13
CTCFL-214ENST00000608108 ZKSCAN2Q63HK3 967 aa14.23□□□□□ -0.13
CTCFL-214ENST00000608108 DNAJC10Q8IXB1 793 aa14.23□□□□□ -0.13
CTCFL-214ENST00000608108 TEX13AQ9BXU3 409 aaPredicted RBP14.23□□□□□ -0.13
CTCFL-214ENST00000608108 DBF4Q9UBU7 674 aaPredicted RBP14.23□□□□□ -0.13
CTCFL-214ENST00000608108 NEFLP07196 543 aa14.23□□□□□ -0.13
CTCFL-214ENST00000608108 TAF1LQ8IZX4 1826 aa14.22□□□□□ -0.13
CTCFL-214ENST00000608108 IPO8O15397 1037 aaKnown RBP14.22□□□□□ -0.13
CTCFL-214ENST00000608108 ANXA1P04083 346 aa14.22□□□□□ -0.13
CTCFL-214ENST00000608108 PROSER3Q2NL68 480 aa14.22□□□□□ -0.13
CTCFL-214ENST00000608108 ERBB4Q15303 1308 aa14.22□□□□□ -0.13
CTCFL-214ENST00000608108 STARD3NLO95772 234 aa14.21□□□□□ -0.13
CTCFL-214ENST00000608108 IRX6P78412 446 aaPredicted RBP14.21□□□□□ -0.13
CTCFL-214ENST00000608108 PDIA6Q15084 440 aa14.21□□□□□ -0.13
CTCFL-214ENST00000608108 DDX21Q9NR30 783 aaKnown RBP eCLIP14.21□□□□□ -0.13
CTCFL-214ENST00000608108 MYH14Q7Z406 1995 aaKnown RBP14.2□□□□□ -0.14
CTCFL-214ENST00000608108 PTPRCP08575 1304 aa14.2□□□□□ -0.14
CTCFL-214ENST00000608108 TRIM27P14373 513 aa14.2□□□□□ -0.14
CTCFL-214ENST00000608108 MYL6BP14649 208 aa14.2□□□□□ -0.14
CTCFL-214ENST00000608108 PIP4K2AP48426 406 aaPredicted RBP14.2□□□□□ -0.14
CTCFL-214ENST00000608108 FLIIQ13045 1269 aa14.2□□□□□ -0.14
CTCFL-214ENST00000608108 ATF7IPQ6VMQ6 1270 aa14.2□□□□□ -0.14
CTCFL-214ENST00000608108 G2E3Q7L622 706 aa14.2□□□□□ -0.14
CTCFL-214ENST00000608108 HYPKQ9NX55 129 aa14.2□□□□□ -0.14
CTCFL-214ENST00000608108 CCNL1Q9UK58 526 aaPredicted RBP14.2□□□□□ -0.14
CTCFL-214ENST00000608108 CYP19A1P11511 503 aaPredicted RBP14.19□□□□□ -0.14
CTCFL-214ENST00000608108 ITPK1Q13572 414 aa14.19□□□□□ -0.14
CTCFL-214ENST00000608108 FTSJ3Q8IY81 847 aaKnown RBP14.19□□□□□ -0.14
CTCFL-214ENST00000608108 ARHGAP45Q92619 1136 aa14.19□□□□□ -0.14
CTCFL-214ENST00000608108 PHAXQ9H814 394 aaKnown RBP14.19□□□□□ -0.14
CTCFL-214ENST00000608108 RGPD3A6NKT7 1758 aaPredicted RBP14.19□□□□□ -0.14
CTCFL-214ENST00000608108 RGPD4Q7Z3J3 1758 aa14.19□□□□□ -0.14
CTCFL-214ENST00000608108 RREB1Q92766 1687 aa14.19□□□□□ -0.14
CTCFL-214ENST00000608108 NBPF26B4DH59 902 aa14.19□□□□□ -0.14
CTCFL-214ENST00000608108 A1BGP04217 495 aa14.19□□□□□ -0.14
CTCFL-214ENST00000608108 C20orf194Q5TEA3 1177 aa14.19□□□□□ -0.14
CTCFL-214ENST00000608108 NBPF14Q5TI25 921 aa14.19□□□□□ -0.14
CTCFL-214ENST00000608108 NBPF10Q6P3W6 841 aaKnown RBP14.19□□□□□ -0.14
CTCFL-214ENST00000608108 NBPF15Q8N660 670 aa14.19□□□□□ -0.14
CTCFL-214ENST00000608108 CLUAP1Q96AJ1 413 aa14.19□□□□□ -0.14
CTCFL-214ENST00000608108 KCNQ4P56696 695 aa14.18□□□□□ -0.14
CTCFL-214ENST00000608108 FKBP5Q13451 457 aaPredicted RBP14.18□□□□□ -0.14
CTCFL-214ENST00000608108 PDE3AQ14432 1141 aa14.18□□□□□ -0.14
CTCFL-214ENST00000608108 API5Q9BZZ5 524 aaKnown RBP14.18□□□□□ -0.14
CTCFL-214ENST00000608108 TNNQ9UQP3 1299 aa14.18□□□□□ -0.14
CTCFL-214ENST00000608108 APBA3O96018 575 aa14.17□□□□□ -0.14
CTCFL-214ENST00000608108 MS4A1P11836 297 aa14.17□□□□□ -0.14
CTCFL-214ENST00000608108 LRP10Q7Z4F1 713 aa14.17□□□□□ -0.14
CTCFL-214ENST00000608108 DZIP1LQ8IYY4 767 aaKnown RBP14.17□□□□□ -0.14
CTCFL-214ENST00000608108 LINC00116Q8NCU8 138 aa14.17□□□□□ -0.14
CTCFL-214ENST00000608108 PANK1Q8TE04 598 aa14.17□□□□□ -0.14
CTCFL-214ENST00000608108 N4BP2Q86UW6 1770 aaPredicted RBP14.17□□□□□ -0.14
CTCFL-214ENST00000608108 RLBP1P12271 317 aa14.16□□□□□ -0.14
CTCFL-214ENST00000608108 CRKLP46109 303 aaKnown RBP14.16□□□□□ -0.14
CTCFL-214ENST00000608108 ZBTB1Q9Y2K1 713 aa14.16□□□□□ -0.14
CTCFL-214ENST00000608108 C4BP0C0L5 1744 aa14.16□□□□□ -0.14
CTCFL-214ENST00000608108 ABCC4O15439 1325 aa14.16□□□□□ -0.14
CTCFL-214ENST00000608108 AIMP1Q12904 312 aaKnown RBP14.15□□□□□ -0.14
CTCFL-214ENST00000608108 FKBP8Q14318 412 aa14.15□□□□□ -0.14
CTCFL-214ENST00000608108 SLC27A3Q5K4L6 730 aa14.15□□□□□ -0.14
CTCFL-214ENST00000608108 XAGE3Q8WTP9 111 aa14.15□□□□□ -0.14
CTCFL-214ENST00000608108 CCDC87Q9NVE4 849 aa14.15□□□□□ -0.14
CTCFL-214ENST00000608108 ZNF330Q9Y3S2 320 aaPredicted RBP14.15□□□□□ -0.14
CTCFL-214ENST00000608108 ARFGEF2Q9Y6D5 1785 aa14.15□□□□□ -0.14
CTCFL-214ENST00000608108 CNTNAP4Q9C0A0 1308 aa14.15□□□□□ -0.14
CTCFL-214ENST00000608108 PLSCR1O15162 318 aa14.15□□□□□ -0.14
CTCFL-214ENST00000608108 INTS5Q6P9B9 1019 aaKnown RBP14.15□□□□□ -0.14
CTCFL-214ENST00000608108 COPS6Q7L5N1 327 aa14.15□□□□□ -0.14
CTCFL-214ENST00000608108 NUP188Q5SRE5 1749 aa14.14□□□□□ -0.15
CTCFL-214ENST00000608108 PXDNLA1KZ92 1463 aa14.14□□□□□ -0.15
CTCFL-214ENST00000608108 F6X3S4 739 aa14.14□□□□□ -0.15
CTCFL-214ENST00000608108 DDX58O95786 925 aaKnown RBP14.14□□□□□ -0.15
CTCFL-214ENST00000608108 CRBNQ96SW2 442 aa14.14□□□□□ -0.15
CTCFL-214ENST00000608108 LRRC4BQ9NT99 713 aa14.14□□□□□ -0.15
CTCFL-214ENST00000608108 ADCY9O60503 1353 aa14.14□□□□□ -0.15
CTCFL-214ENST00000608108 PI4KAP2A4QPH2 592 aa14.13□□□□□ -0.15
CTCFL-214ENST00000608108 IL6STP40189 918 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms