RNA–Protein interactions for RNA: ENST00000603669.5

GRAMD1A-213, Transcript of GRAM domain containing 1A, humanhuman

TSL 5

Gene GRAMD1A, Length 552 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-213ENST00000603669 PRELPP51888 382 aa20.76■□□□□ 0.91
GRAMD1A-213ENST00000603669 EIF4G2P78344 907 aaKnown RBP eCLIP20.76■□□□□ 0.911e-6■■■■■ 33.8
GRAMD1A-213ENST00000603669 SMC1BQ8NDV3 1235 aa20.76■□□□□ 0.91
GRAMD1A-213ENST00000603669 NARFQ9UHQ1 456 aa20.76■□□□□ 0.91
GRAMD1A-213ENST00000603669 BCL2L12Q9HB09 334 aa20.75■□□□□ 0.91
GRAMD1A-213ENST00000603669 SERPINB2P05120 415 aa20.74■□□□□ 0.91
GRAMD1A-213ENST00000603669 TJP1Q07157 1748 aa20.74■□□□□ 0.91
GRAMD1A-213ENST00000603669 RNMTO43148 476 aaKnown RBP20.73■□□□□ 0.91
GRAMD1A-213ENST00000603669 ZBTB1Q9Y2K1 713 aa20.73■□□□□ 0.91
GRAMD1A-213ENST00000603669 GLTPD2A6NH11 291 aa20.72■□□□□ 0.91
GRAMD1A-213ENST00000603669 HMOX1P09601 288 aa20.72■□□□□ 0.91
GRAMD1A-213ENST00000603669 VEGFAP15692 232 aaPredicted RBP20.72■□□□□ 0.91
GRAMD1A-213ENST00000603669 LMNB1P20700 586 aa20.72■□□□□ 0.91
GRAMD1A-213ENST00000603669 TTLL6Q8N841 843 aa20.72■□□□□ 0.91
GRAMD1A-213ENST00000603669 KNSTRNQ9Y448 316 aa20.72■□□□□ 0.91
GRAMD1A-213ENST00000603669 ADAMTS7Q9UKP4 1686 aa20.72■□□□□ 0.91
GRAMD1A-213ENST00000603669 SBF1O95248 1867 aa20.71■□□□□ 0.91
GRAMD1A-213ENST00000603669 CAPN15O75808 1086 aa20.71■□□□□ 0.91
GRAMD1A-213ENST00000603669 C2CD5Q86YS7 1000 aa20.71■□□□□ 0.91
GRAMD1A-213ENST00000603669 PCGF6Q9BYE7 350 aa20.71■□□□□ 0.91
GRAMD1A-213ENST00000603669 CANXP27824 592 aaKnown RBP20.7■□□□□ 0.9
GRAMD1A-213ENST00000603669 BICDL1Q6ZP65 573 aa20.7■□□□□ 0.9
GRAMD1A-213ENST00000603669 COL15A1P39059 1388 aa20.7■□□□□ 0.9
GRAMD1A-213ENST00000603669 MTHFSDQ2M296 383 aaKnown RBP20.69■□□□□ 0.9
GRAMD1A-213ENST00000603669 H0YIN7 160 aa20.68■□□□□ 0.9
GRAMD1A-213ENST00000603669 ZC3H4Q9UPT8 1303 aaKnown RBP20.68■□□□□ 0.9
GRAMD1A-213ENST00000603669 SCN11AQ9UI33 1791 aa20.67■□□□□ 0.9
GRAMD1A-213ENST00000603669 NFKBIEO00221 500 aa20.67■□□□□ 0.9
GRAMD1A-213ENST00000603669 TNS4Q8IZW8 715 aa20.67■□□□□ 0.9
GRAMD1A-213ENST00000603669 POTECB2RU33 542 aa20.66■□□□□ 0.9
GRAMD1A-213ENST00000603669 AMER1Q5JTC6 1135 aaPredicted RBP20.66■□□□□ 0.9
GRAMD1A-213ENST00000603669 VSIG10Q8N0Z9 540 aa20.66■□□□□ 0.9
GRAMD1A-213ENST00000603669 CARMIL3Q8ND23 1372 aa20.66■□□□□ 0.9
GRAMD1A-213ENST00000603669 CCDC24Q8N4L8 307 aa20.65■□□□□ 0.9
GRAMD1A-213ENST00000603669 ZNF219Q9P2Y4 722 aaPredicted RBP20.65■□□□□ 0.9
GRAMD1A-213ENST00000603669 TNRC6CQ9HCJ0 1690 aaKnown RBP20.64■□□□□ 0.9
GRAMD1A-213ENST00000603669 EIF5P55010 431 aaKnown RBP20.64■□□□□ 0.89
GRAMD1A-213ENST00000603669 ZNF622Q969S3 477 aaKnown RBP eCLIP20.64■□□□□ 0.89
GRAMD1A-213ENST00000603669 AFDNP55196 1824 aaKnown RBP20.64■□□□□ 0.89
GRAMD1A-213ENST00000603669 CLSPNQ9HAW4 1339 aa20.63■□□□□ 0.89
GRAMD1A-213ENST00000603669 STARD3NLO95772 234 aa20.63■□□□□ 0.89
GRAMD1A-213ENST00000603669 TBC1D9BQ66K14 1250 aa20.63■□□□□ 0.89
GRAMD1A-213ENST00000603669 C21orf2O43822 256 aa20.62■□□□□ 0.89
GRAMD1A-213ENST00000603669 HSPA1AP0DMV8 641 aaKnown RBP20.62■□□□□ 0.89
GRAMD1A-213ENST00000603669 HSPA1BP0DMV9 641 aaKnown RBP20.62■□□□□ 0.89
GRAMD1A-213ENST00000603669 DPY19L2Q6NUT2 758 aa20.62■□□□□ 0.89
GRAMD1A-213ENST00000603669 TBC1D2BQ9UPU7 963 aa20.62■□□□□ 0.89
GRAMD1A-213ENST00000603669 TTC5Q8N0Z6 440 aa20.61■□□□□ 0.89
GRAMD1A-213ENST00000603669 MRC1P22897 1456 aa20.61■□□□□ 0.89
GRAMD1A-213ENST00000603669 NRXN2Q9P2S2 1712 aa20.61■□□□□ 0.89
GRAMD1A-213ENST00000603669 A0A087WZG4 1122 aa20.6■□□□□ 0.89
GRAMD1A-213ENST00000603669 DIAPH1O60610 1272 aaKnown RBP20.6■□□□□ 0.89
GRAMD1A-213ENST00000603669 ERFEQ4G0M1 354 aa20.6■□□□□ 0.89
GRAMD1A-213ENST00000603669 ZNF496Q96IT1 587 aaPredicted RBP20.6■□□□□ 0.89
GRAMD1A-213ENST00000603669 BRIP1Q9BX63 1249 aa20.6■□□□□ 0.89
GRAMD1A-213ENST00000603669 ZNF330Q9Y3S2 320 aaPredicted RBP20.6■□□□□ 0.89
GRAMD1A-213ENST00000603669 PRR5LQ6MZQ0 368 aa20.59■□□□□ 0.89
GRAMD1A-213ENST00000603669 IL17REQ8NFR9 667 aa20.59■□□□□ 0.89
GRAMD1A-213ENST00000603669 PDE6BP35913 854 aa20.58■□□□□ 0.89
GRAMD1A-213ENST00000603669 CC2D1BQ5T0F9 858 aaKnown RBP20.57■□□□□ 0.88
GRAMD1A-213ENST00000603669 A1BGP04217 495 aa20.56■□□□□ 0.88
GRAMD1A-213ENST00000603669 ZNF790Q6PG37 636 aa20.56■□□□□ 0.88
GRAMD1A-213ENST00000603669 DDNO94850 711 aaPredicted RBP20.55■□□□□ 0.88
GRAMD1A-213ENST00000603669 POTEIP0CG38 1075 aa20.55■□□□□ 0.88
GRAMD1A-213ENST00000603669 POTEJP0CG39 1038 aa20.55■□□□□ 0.88
GRAMD1A-213ENST00000603669 TEFQ10587 303 aa20.55■□□□□ 0.88
GRAMD1A-213ENST00000603669 TEX13AQ9BXU3 409 aaPredicted RBP20.55■□□□□ 0.88
GRAMD1A-213ENST00000603669 PDZRN3Q9UPQ7 1066 aa20.55■□□□□ 0.88
GRAMD1A-213ENST00000603669 CCDC88AQ3V6T2 1871 aa20.55■□□□□ 0.88
GRAMD1A-213ENST00000603669 DLEC1Q9Y238 1755 aa20.54■□□□□ 0.88
GRAMD1A-213ENST00000603669 PER1O15534 1290 aaPredicted RBP20.54■□□□□ 0.88
GRAMD1A-213ENST00000603669 SETDB2Q96T68 719 aa20.54■□□□□ 0.88
GRAMD1A-213ENST00000603669 HEG1Q9ULI3 1381 aa20.54■□□□□ 0.88
GRAMD1A-213ENST00000603669 GNAT3A8MTJ3 354 aa20.53■□□□□ 0.88
GRAMD1A-213ENST00000603669 IL6STP40189 918 aaPredicted RBP20.53■□□□□ 0.88
GRAMD1A-213ENST00000603669 CNGB1Q14028 1251 aaPredicted RBP20.53■□□□□ 0.88
GRAMD1A-213ENST00000603669 CHADLQ6NUI6 762 aa20.53■□□□□ 0.88
GRAMD1A-213ENST00000603669 TAOK3Q9H2K8 898 aa20.53■□□□□ 0.88
GRAMD1A-213ENST00000603669 MKRN1Q9UHC7 482 aaKnown RBP20.53■□□□□ 0.88
GRAMD1A-213ENST00000603669 KIF7Q2M1P5 1343 aa20.53■□□□□ 0.88
GRAMD1A-213ENST00000603669 U2SURPO15042 1029 aaKnown RBP20.52■□□□□ 0.88
GRAMD1A-213ENST00000603669 KCNQ3O43525 872 aa20.52■□□□□ 0.88
GRAMD1A-213ENST00000603669 TIAM2Q8IVF5 1701 aa20.51■□□□□ 0.87
GRAMD1A-213ENST00000603669 NPHP1O15259 732 aa20.51■□□□□ 0.87
GRAMD1A-213ENST00000603669 CAMTA2O94983 1202 aa20.51■□□□□ 0.87
GRAMD1A-213ENST00000603669 SRGNP10124 158 aa20.51■□□□□ 0.87
GRAMD1A-213ENST00000603669 CNBD1Q8NA66 436 aa20.51■□□□□ 0.87
GRAMD1A-213ENST00000603669 CNKSR1Q969H4 720 aa20.51■□□□□ 0.87
GRAMD1A-213ENST00000603669 CREBZFQ9NS37 354 aa20.51■□□□□ 0.87
GRAMD1A-213ENST00000603669 ANKRD31Q8N7Z5 1873 aa20.5■□□□□ 0.87
GRAMD1A-213ENST00000603669 PIP4K2AP48426 406 aaPredicted RBP20.5■□□□□ 0.87
GRAMD1A-213ENST00000603669 STYK1Q6J9G0 422 aa20.5■□□□□ 0.87
GRAMD1A-213ENST00000603669 PRPF40BQ6NWY9 871 aaKnown RBP20.5■□□□□ 0.87
GRAMD1A-213ENST00000603669 NPM2Q86SE8 214 aaKnown RBP20.5■□□□□ 0.87
GRAMD1A-213ENST00000603669 FMNL2Q96PY5 1086 aa20.5■□□□□ 0.87
GRAMD1A-213ENST00000603669 LTBP3Q9NS15 1303 aa20.5■□□□□ 0.87
GRAMD1A-213ENST00000603669 UBR2Q8IWV8 1755 aa20.49■□□□□ 0.87
GRAMD1A-213ENST00000603669 VIRMAQ69YN4 1812 aaKnown RBP20.49■□□□□ 0.87
GRAMD1A-213ENST00000603669 GAS2L2Q8NHY3 880 aa20.49■□□□□ 0.87
GRAMD1A-213ENST00000603669 USP16Q9Y5T5 823 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms