RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 SLC8A1P32418 973 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 ESRRGP62508 458 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 CCDC84Q86UT8 332 aaPredicted RBP3.91□□□□□ -1.78
NEB-218ENST00000603639 PDRG1Q9NUG6 133 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 HARSP12081 509 aaKnown RBP3.91□□□□□ -1.78
NEB-218ENST00000603639 MAGEA9P43362 315 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 MRPS25P82663 173 aaKnown RBP3.91□□□□□ -1.78
NEB-218ENST00000603639 SYCP1Q15431 976 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 ZSCAN25Q6NSZ9 544 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 PHLDB3Q6NSJ2 640 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 CALR3Q96L12 384 aaKnown RBP3.91□□□□□ -1.78
NEB-218ENST00000603639 SH2B1Q9NRF2 756 aaPredicted RBP3.91□□□□□ -1.78
NEB-218ENST00000603639 STIM2Q9P246 746 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 MTUS1Q9ULD2 1270 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 P3H3Q8IVL6 736 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 MSH5O43196 834 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 LMNTD2Q8IXW0 634 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 CACNA2D4Q7Z3S7 1137 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 CETN1Q12798 172 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 INTS4Q96HW7 963 aaKnown RBP3.91□□□□□ -1.78
NEB-218ENST00000603639 STXBP3O00186 592 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 ZNF131P52739 623 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 NMIQ13287 307 aaPredicted RBP3.91□□□□□ -1.78
NEB-218ENST00000603639 ZNF500O60304 480 aaPredicted RBP3.91□□□□□ -1.78
NEB-218ENST00000603639 RIPK4P57078 832 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 RAI14Q9P0K7 980 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 PRPHP41219 470 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 RBM33Q96EV2 1170 aaKnown RBP3.91□□□□□ -1.78
NEB-218ENST00000603639 TRIM34Q9BYJ4 488 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 E7ENQ6 273 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 FERMT1Q9BQL6 677 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 PFDN4Q9NQP4 134 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 NDUFA13Q9P0J0 144 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 DDX41Q9UJV9 622 aaKnown RBP3.91□□□□□ -1.78
NEB-218ENST00000603639 PAK3O75914 559 aaPredicted RBP3.91□□□□□ -1.78
NEB-218ENST00000603639 RNF8O76064 485 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 HDGFL2Q7Z4V5 671 aaPredicted RBP3.91□□□□□ -1.78
NEB-218ENST00000603639 C9orf78Q9NZ63 289 aaPredicted RBP3.91□□□□□ -1.78
NEB-218ENST00000603639 GBP7Q8N8V2 638 aaPredicted RBP3.91□□□□□ -1.78
NEB-218ENST00000603639 LZICQ8WZA0 190 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 PHAXQ9H814 394 aaKnown RBP3.91□□□□□ -1.78
NEB-218ENST00000603639 U3KPZ7 1027 aaPredicted RBP3.91□□□□□ -1.78
NEB-218ENST00000603639 FBF1Q8TES7 1133 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 AMOTQ4VCS5 1084 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 BUB1BO60566 1050 aaPredicted RBP3.9□□□□□ -1.78
NEB-218ENST00000603639 PPFIBP2Q8ND30 876 aa3.9□□□□□ -1.78
NEB-218ENST00000603639 SPATA32Q96LK8 384 aa3.9□□□□□ -1.78
NEB-218ENST00000603639 KLHL40Q2TBA0 621 aa3.9□□□□□ -1.78
NEB-218ENST00000603639 ALS2CR12Q96Q35 445 aa3.9□□□□□ -1.78
NEB-218ENST00000603639 POLA1P09884 1462 aaPredicted RBP3.9□□□□□ -1.78
NEB-218ENST00000603639 ME1P48163 572 aa3.9□□□□□ -1.78
NEB-218ENST00000603639 GNAI1P63096 354 aa3.9□□□□□ -1.78
NEB-218ENST00000603639 CCDC121Q6ZUS5 278 aa3.9□□□□□ -1.78
NEB-218ENST00000603639 GOLGA5Q8TBA6 731 aa3.9□□□□□ -1.78
NEB-218ENST00000603639 CCDC158Q5M9N0 1113 aa3.9□□□□□ -1.78
NEB-218ENST00000603639 VPS36Q86VN1 386 aa3.9□□□□□ -1.78
NEB-218ENST00000603639 MVPQ14764 893 aaKnown RBP3.9□□□□□ -1.78
NEB-218ENST00000603639 DRC1Q96MC2 740 aa3.9□□□□□ -1.78
NEB-218ENST00000603639 CTNNBL1Q8WYA6 563 aaPredicted RBP3.9□□□□□ -1.79
NEB-218ENST00000603639 PDCD7Q8N8D1 485 aaKnown RBP3.9□□□□□ -1.79
NEB-218ENST00000603639 ZMAT2Q96NC0 199 aaKnown RBP3.9□□□□□ -1.79
NEB-218ENST00000603639 NUCKS1Q9H1E3 243 aaKnown RBP3.9□□□□□ -1.79
NEB-218ENST00000603639 VEZTQ9HBM0 779 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 JRKLQ9Y4A0 524 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 FRA10AC1Q70Z53 315 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 MLKLQ8NB16 471 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 RPGRIP1Q96KN7 1286 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 HOXC8P31273 242 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 KIF5AQ12840 1032 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 EP400NLQ6ZTU2 488 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 PLCB1Q9NQ66 1216 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 DYNC1I2Q13409 638 aaKnown RBP3.9□□□□□ -1.79
NEB-218ENST00000603639 DUSP27Q5VZP5 1158 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 GEMIN8Q9NWZ8 242 aaKnown RBP3.9□□□□□ -1.79
NEB-218ENST00000603639 FERP16591 822 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 EPS15P42566 896 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 CCAR1Q8IX12 1150 aaKnown RBP3.9□□□□□ -1.79
NEB-218ENST00000603639 SEMA3FQ13275 785 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 CCDC178Q5BJE1 867 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 NAP1L3Q99457 506 aaPredicted RBP3.9□□□□□ -1.79
NEB-218ENST00000603639 CTAGE8P0CG41 777 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 UBASH3AP57075 661 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 AIMP1Q12904 312 aaKnown RBP3.9□□□□□ -1.79
NEB-218ENST00000603639 KRBA2Q6ZNG9 492 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 CTAGE4Q8IX94 777 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 KIF1BPQ96EK5 621 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 KANK1Q14678 1352 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 ZNF445P59923 1031 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 YY1AP1Q9H869 796 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 CCDC57Q2TAC2 916 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 UQCRHLA0A096LP55 91 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 UQCRHP07919 91 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 NOP14P78316 857 aaKnown RBP3.9□□□□□ -1.79
NEB-218ENST00000603639 BRPF3Q9ULD4 1205 aa3.9□□□□□ -1.79
NEB-218ENST00000603639 INPP5BP32019 993 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 SREK1Q8WXA9 508 aaKnown RBP3.89□□□□□ -1.79
NEB-218ENST00000603639 MAP3K11Q16584 847 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 RASEFQ8IZ41 740 aa3.89□□□□□ -1.79
NEB-218ENST00000603639 TSPYL2Q9H2G4 693 aaPredicted RBP3.89□□□□□ -1.79
NEB-218ENST00000603639 CHIC2Q9UKJ5 165 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms