RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 GOLGA8BA8MQT2 603 aa11.11□□□□□ -0.63
CSMD1-217ENST00000602723 PPM1EQ8WY54 764 aa11.11□□□□□ -0.63
CSMD1-217ENST00000602723 KIF1BPQ96EK5 621 aa11.11□□□□□ -0.63
CSMD1-217ENST00000602723 GLRX3O76003 335 aaKnown RBP11.1□□□□□ -0.63
CSMD1-217ENST00000602723 LARP1Q6PKG0 1096 aaKnown RBP11.1□□□□□ -0.63
CSMD1-217ENST00000602723 FSIP1Q8NA03 581 aa11.1□□□□□ -0.63
CSMD1-217ENST00000602723 TIGD1Q96MW7 591 aa11.1□□□□□ -0.63
CSMD1-217ENST00000602723 SYNJ2O15056 1496 aa11.1□□□□□ -0.63
CSMD1-217ENST00000602723 SSFA2P28290 1259 aa11.1□□□□□ -0.63
CSMD1-217ENST00000602723 RBM25P49756 843 aaKnown RBP11.1□□□□□ -0.63
CSMD1-217ENST00000602723 RAB34Q9BZG1 259 aa11.1□□□□□ -0.63
CSMD1-217ENST00000602723 MNAT1P51948 309 aa11.1□□□□□ -0.63
CSMD1-217ENST00000602723 CAVIN2O95810 425 aa11.1□□□□□ -0.63
CSMD1-217ENST00000602723 NBPF1Q3BBV0 1214 aa11.1□□□□□ -0.63
CSMD1-217ENST00000602723 CEP135Q66GS9 1140 aa11.1□□□□□ -0.63
CSMD1-217ENST00000602723 FEZ1Q99689 392 aa11.1□□□□□ -0.63
CSMD1-217ENST00000602723 SLC12A5Q9H2X9 1139 aa11.1□□□□□ -0.63
CSMD1-217ENST00000602723 IGHMBP2P38935 993 aaKnown RBP11.09□□□□□ -0.63
CSMD1-217ENST00000602723 TMEM266Q2M3C6 531 aa11.09□□□□□ -0.63
CSMD1-217ENST00000602723 EHBP1Q8NDI1 1231 aa11.09□□□□□ -0.63
CSMD1-217ENST00000602723 LIMCH1Q9UPQ0 1083 aa11.09□□□□□ -0.63
CSMD1-217ENST00000602723 FSD2A1L4K1 749 aa11.09□□□□□ -0.63
CSMD1-217ENST00000602723 RAD54L2Q9Y4B4 1467 aa11.09□□□□□ -0.63
CSMD1-217ENST00000602723 PPP4R3AQ6IN85 833 aa11.09□□□□□ -0.63
CSMD1-217ENST00000602723 SPDYE4A6NLX3 237 aa11.09□□□□□ -0.63
CSMD1-217ENST00000602723 CTNNA2P26232 953 aa11.09□□□□□ -0.63
CSMD1-217ENST00000602723 SMARCA5O60264 1052 aaPredicted RBP11.09□□□□□ -0.63
CSMD1-217ENST00000602723 PAXBP1Q9Y5B6 917 aa11.09□□□□□ -0.63
CSMD1-217ENST00000602723 HMGB1P09429 215 aaKnown RBP11.09□□□□□ -0.63
CSMD1-217ENST00000602723 DDX19AQ9NUU7 478 aaKnown RBP11.09□□□□□ -0.63
CSMD1-217ENST00000602723 CABP1Q9NZU7 370 aa11.09□□□□□ -0.63
CSMD1-217ENST00000602723 ZSCAN29Q8IWY8 852 aaPredicted RBP11.08□□□□□ -0.64
CSMD1-217ENST00000602723 CNNM3Q8NE01 707 aa11.08□□□□□ -0.64
CSMD1-217ENST00000602723 SLC12A7Q9Y666 1083 aa11.08□□□□□ -0.64
CSMD1-217ENST00000602723 LIG1P18858 919 aa11.08□□□□□ -0.64
CSMD1-217ENST00000602723 TDRD12Q587J7 1177 aaKnown RBP11.08□□□□□ -0.64
CSMD1-217ENST00000602723 KRT222Q8N1A0 295 aa11.08□□□□□ -0.64
CSMD1-217ENST00000602723 NAPBQ9H115 298 aa11.08□□□□□ -0.64
CSMD1-217ENST00000602723 RTEL1-TNFRSF6BF6WH68 1400 aa11.08□□□□□ -0.64
CSMD1-217ENST00000602723 FAM114A1Q8IWE2 563 aa11.08□□□□□ -0.64
CSMD1-217ENST00000602723 METTL24Q5JXM2 366 aa11.08□□□□□ -0.64
CSMD1-217ENST00000602723 JADE2Q9NQC1 790 aa11.08□□□□□ -0.64
CSMD1-217ENST00000602723 A0A087WZG4 1122 aa11.08□□□□□ -0.64
CSMD1-217ENST00000602723 RPAP2Q8IXW5 612 aaPredicted RBP11.08□□□□□ -0.64
CSMD1-217ENST00000602723 PRIMPOLQ96LW4 560 aa11.08□□□□□ -0.64
CSMD1-217ENST00000602723 MTIF2P46199 727 aaKnown RBP11.08□□□□□ -0.64
CSMD1-217ENST00000602723 CTCFLQ8NI51 663 aaPredicted RBP11.08□□□□□ -0.64
CSMD1-217ENST00000602723 C6orf163Q5TEZ5 329 aa11.07□□□□□ -0.64
CSMD1-217ENST00000602723 ANKRD18BA2A2Z9 1011 aa11.07□□□□□ -0.64
CSMD1-217ENST00000602723 NFE2L2Q16236 605 aa11.07□□□□□ -0.64
CSMD1-217ENST00000602723 FCHSD2O94868 740 aa11.07□□□□□ -0.64
CSMD1-217ENST00000602723 TOM1L2Q6ZVM7 507 aa11.07□□□□□ -0.64
CSMD1-217ENST00000602723 BIN1O00499 593 aa11.07□□□□□ -0.64
CSMD1-217ENST00000602723 CETN1Q12798 172 aa11.07□□□□□ -0.64
CSMD1-217ENST00000602723 CCDC85AQ96PX6 553 aaPredicted RBP11.07□□□□□ -0.64
CSMD1-217ENST00000602723 TBC1D2Q9BYX2 928 aa11.07□□□□□ -0.64
CSMD1-217ENST00000602723 TMPOP42166 694 aaKnown RBP11.07□□□□□ -0.64
CSMD1-217ENST00000602723 PRPF4BQ13523 1007 aaKnown RBP11.07□□□□□ -0.64
CSMD1-217ENST00000602723 SLFN5Q08AF3 891 aa11.07□□□□□ -0.64
CSMD1-217ENST00000602723 AKAP2Q9Y2D5 859 aa11.07□□□□□ -0.64
CSMD1-217ENST00000602723 HSPA4P34932 840 aa11.07□□□□□ -0.64
CSMD1-217ENST00000602723 SSRP1Q08945 709 aaKnown RBP11.07□□□□□ -0.64
CSMD1-217ENST00000602723 BMS1Q14692 1282 aaKnown RBP11.07□□□□□ -0.64
CSMD1-217ENST00000602723 RRS1Q15050 365 aaKnown RBP11.07□□□□□ -0.64
CSMD1-217ENST00000602723 IKBKGQ9Y6K9 419 aa11.07□□□□□ -0.64
CSMD1-217ENST00000602723 CPLX3Q8WVH0 158 aa11.06□□□□□ -0.64
CSMD1-217ENST00000602723 CCDC171Q6TFL3 1326 aa11.06□□□□□ -0.64
CSMD1-217ENST00000602723 ATAD2Q6PL18 1390 aa11.06□□□□□ -0.64
CSMD1-217ENST00000602723 MINDY4BA8MYZ0 360 aa11.06□□□□□ -0.64
CSMD1-217ENST00000602723 ABCF2Q9UG63 623 aa11.06□□□□□ -0.64
CSMD1-217ENST00000602723 SYNJ1O43426 1573 aa11.06□□□□□ -0.64
CSMD1-217ENST00000602723 HSF2BPO75031 334 aa11.06□□□□□ -0.64
CSMD1-217ENST00000602723 PPP1R1BQ9UD71 204 aaPredicted RBP11.06□□□□□ -0.64
CSMD1-217ENST00000602723 STX6O43752 255 aa11.06□□□□□ -0.64
CSMD1-217ENST00000602723 GNAT3A8MTJ3 354 aa11.06□□□□□ -0.64
CSMD1-217ENST00000602723 UBE2HP62256 183 aa11.06□□□□□ -0.64
CSMD1-217ENST00000602723 ANKS4BQ8N8V4 417 aa11.06□□□□□ -0.64
CSMD1-217ENST00000602723 CCDC12Q8WUD4 166 aaPredicted RBP11.06□□□□□ -0.64
CSMD1-217ENST00000602723 GOLGA4Q13439 2230 aaKnown RBP11.06□□□□□ -0.64
CSMD1-217ENST00000602723 CCDC141Q6ZP82 1450 aa11.05□□□□□ -0.64
CSMD1-217ENST00000602723 CCDC194A0A1B0GVG4 234 aa11.05□□□□□ -0.64
CSMD1-217ENST00000602723 DNAAF4Q8WXU2 420 aa11.05□□□□□ -0.64
CSMD1-217ENST00000602723 NOP2P46087 812 aaKnown RBP11.05□□□□□ -0.64
CSMD1-217ENST00000602723 DDX54Q8TDD1 881 aaKnown RBP11.05□□□□□ -0.64
CSMD1-217ENST00000602723 IVLP07476 585 aa11.05□□□□□ -0.64
CSMD1-217ENST00000602723 ZNF165P49910 485 aa11.05□□□□□ -0.64
CSMD1-217ENST00000602723 DUSP27Q5VZP5 1158 aa11.05□□□□□ -0.64
CSMD1-217ENST00000602723 PPP1R14CQ8TAE6 165 aa11.05□□□□□ -0.64
CSMD1-217ENST00000602723 SPTY2D1Q68D10 685 aaPredicted RBP11.05□□□□□ -0.64
CSMD1-217ENST00000602723 CATIPQ7Z7H3 387 aa11.05□□□□□ -0.64
CSMD1-217ENST00000602723 BOLA2Q9H3K6 86 aa11.05□□□□□ -0.64
CSMD1-217ENST00000602723 ABCC11Q96J66 1382 aa11.05□□□□□ -0.64
CSMD1-217ENST00000602723 SCLT1Q96NL6 688 aa11.05□□□□□ -0.64
CSMD1-217ENST00000602723 ARFGAP3Q9NP61 516 aa11.05□□□□□ -0.64
CSMD1-217ENST00000602723 TMOD2Q9NZR1 351 aa11.05□□□□□ -0.64
CSMD1-217ENST00000602723 POLR3DP05423 398 aaPredicted RBP11.05□□□□□ -0.64
CSMD1-217ENST00000602723 GNG11P61952 73 aa11.05□□□□□ -0.64
CSMD1-217ENST00000602723 GUCY1B3Q02153 619 aa11.05□□□□□ -0.64
CSMD1-217ENST00000602723 TXNDC2Q86VQ3 553 aa11.05□□□□□ -0.64
CSMD1-217ENST00000602723 HOMER2Q9NSB8 354 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms