RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 PRAMEF22A3QJZ6 481 aa23.7■■□□□ 1.38
SSBP4-212ENST00000601919 STARD3NLO95772 234 aa23.7■■□□□ 1.38
SSBP4-212ENST00000601919 PDE3AQ14432 1141 aa23.7■■□□□ 1.38
SSBP4-212ENST00000601919 ATF7IPQ6VMQ6 1270 aa23.69■■□□□ 1.38
SSBP4-212ENST00000601919 API5Q9BZZ5 524 aaKnown RBP23.69■■□□□ 1.38
SSBP4-212ENST00000601919 DDX21Q9NR30 783 aaKnown RBP eCLIP23.69■■□□□ 1.38
SSBP4-212ENST00000601919 HYPKQ9NX55 129 aa23.69■■□□□ 1.38
SSBP4-212ENST00000601919 CHPF2Q9P2E5 772 aa23.69■■□□□ 1.38
SSBP4-212ENST00000601919 USP16Q9Y5T5 823 aa23.69■■□□□ 1.38
SSBP4-212ENST00000601919 LOC102724428A0A0B4J2F2 783 aa23.68■■□□□ 1.38
SSBP4-212ENST00000601919 SIK1P57059 783 aa23.68■■□□□ 1.38
SSBP4-212ENST00000601919 FTSJ3Q8IY81 847 aaKnown RBP23.68■■□□□ 1.38
SSBP4-212ENST00000601919 CICQ96RK0 1608 aaPredicted RBP23.68■■□□□ 1.38
SSBP4-212ENST00000601919 TJP1Q07157 1748 aa23.65■■□□□ 1.38
SSBP4-212ENST00000601919 TRIM27P14373 513 aa23.65■■□□□ 1.38
SSBP4-212ENST00000601919 ATP6V1AP38606 617 aa23.65■■□□□ 1.38
SSBP4-212ENST00000601919 FLIIQ13045 1269 aa23.65■■□□□ 1.38
SSBP4-212ENST00000601919 FKBP8Q14318 412 aa23.65■■□□□ 1.38
SSBP4-212ENST00000601919 ERICH6BQ5W0A0 696 aa23.65■■□□□ 1.38
SSBP4-212ENST00000601919 DNAJC10Q8IXB1 793 aa23.65■■□□□ 1.38
SSBP4-212ENST00000601919 DZIP1LQ8IYY4 767 aaKnown RBP23.65■■□□□ 1.38
SSBP4-212ENST00000601919 TRIM37O94972 964 aa23.64■■□□□ 1.37
SSBP4-212ENST00000601919 HMGB2P26583 209 aaKnown RBP23.64■■□□□ 1.37
SSBP4-212ENST00000601919 LY75O60449 1722 aa23.64■■□□□ 1.37
SSBP4-212ENST00000601919 IRX6P78412 446 aaPredicted RBP23.63■■□□□ 1.37
SSBP4-212ENST00000601919 FKBP5Q13451 457 aaPredicted RBP23.62■■□□□ 1.37
SSBP4-212ENST00000601919 PTF1AQ7RTS3 328 aa23.62■■□□□ 1.37
SSBP4-212ENST00000601919 SLC4A9Q96Q91 983 aa23.62■■□□□ 1.37
SSBP4-212ENST00000601919 DDX58O95786 925 aaKnown RBP23.61■■□□□ 1.37
SSBP4-212ENST00000601919 PDIA6Q15084 440 aa23.61■■□□□ 1.37
SSBP4-212ENST00000601919 G2E3Q7L622 706 aa23.61■■□□□ 1.37
SSBP4-212ENST00000601919 GTF3C3Q9Y5Q9 886 aa23.61■■□□□ 1.37
SSBP4-212ENST00000601919 CYP19A1P11511 503 aaPredicted RBP23.6■■□□□ 1.37
SSBP4-212ENST00000601919 MYL6BP14649 208 aa23.6■■□□□ 1.37
SSBP4-212ENST00000601919 CLUAP1Q96AJ1 413 aa23.6■■□□□ 1.37
SSBP4-212ENST00000601919 ANXA1P04083 346 aa23.59■■□□□ 1.37
SSBP4-212ENST00000601919 A1BGP04217 495 aa23.59■■□□□ 1.37
SSBP4-212ENST00000601919 PROSER3Q2NL68 480 aa23.59■■□□□ 1.37
SSBP4-212ENST00000601919 C20orf194Q5TEA3 1177 aa23.59■■□□□ 1.37
SSBP4-212ENST00000601919 PANK1Q8TE04 598 aa23.59■■□□□ 1.37
SSBP4-212ENST00000601919 PHAXQ9H814 394 aaKnown RBP23.59■■□□□ 1.37
SSBP4-212ENST00000601919 COL5A3P25940 1745 aaPredicted RBP23.59■■□□□ 1.37
SSBP4-212ENST00000601919 CCNL1Q9UK58 526 aaPredicted RBP23.58■■□□□ 1.37
SSBP4-212ENST00000601919 ABCC4O15439 1325 aa23.58■■□□□ 1.36
SSBP4-212ENST00000601919 NPM2Q86SE8 214 aaKnown RBP23.57■■□□□ 1.36
SSBP4-212ENST00000601919 CHMP4BQ9H444 224 aaKnown RBP23.57■■□□□ 1.36
SSBP4-212ENST00000601919 NBPF26B4DH59 902 aa23.56■■□□□ 1.36
SSBP4-212ENST00000601919 ITPK1Q13572 414 aa23.56■■□□□ 1.36
SSBP4-212ENST00000601919 NBPF14Q5TI25 921 aa23.56■■□□□ 1.36
SSBP4-212ENST00000601919 NBPF10Q6P3W6 841 aaKnown RBP23.56■■□□□ 1.36
SSBP4-212ENST00000601919 NBPF15Q8N660 670 aa23.56■■□□□ 1.36
SSBP4-212ENST00000601919 CRBNQ96SW2 442 aa23.56■■□□□ 1.36
SSBP4-212ENST00000601919 CCDC87Q9NVE4 849 aa23.56■■□□□ 1.36
SSBP4-212ENST00000601919 RLBP1P12271 317 aa23.55■■□□□ 1.36
SSBP4-212ENST00000601919 MVPQ14764 893 aaKnown RBP23.55■■□□□ 1.36
SSBP4-212ENST00000601919 SLC27A3Q5K4L6 730 aa23.55■■□□□ 1.36
SSBP4-212ENST00000601919 COPS6Q7L5N1 327 aa23.55■■□□□ 1.36
SSBP4-212ENST00000601919 XAGE3Q8WTP9 111 aa23.55■■□□□ 1.36
SSBP4-212ENST00000601919 PXDNLA1KZ92 1463 aa23.55■■□□□ 1.36
SSBP4-212ENST00000601919 RREB1Q92766 1687 aa23.54■■□□□ 1.36
SSBP4-212ENST00000601919 PLSCR1O15162 318 aa23.54■■□□□ 1.36
SSBP4-212ENST00000601919 CRKLP46109 303 aaKnown RBP23.54■■□□□ 1.36
SSBP4-212ENST00000601919 CCT4P50991 539 aaKnown RBP23.54■■□□□ 1.36
SSBP4-212ENST00000601919 AIMP1Q12904 312 aaKnown RBP23.54■■□□□ 1.36
SSBP4-212ENST00000601919 AAMPQ13685 434 aa23.54■■□□□ 1.36
SSBP4-212ENST00000601919 KSR2Q6VAB6 950 aa23.54■■□□□ 1.36
SSBP4-212ENST00000601919 LRP10Q7Z4F1 713 aa23.54■■□□□ 1.36
SSBP4-212ENST00000601919 ITPRIPQ8IWB1 547 aa23.54■■□□□ 1.36
SSBP4-212ENST00000601919 TMEM57Q8N5G2 664 aa23.54■■□□□ 1.36
SSBP4-212ENST00000601919 TNNQ9UQP3 1299 aa23.54■■□□□ 1.36
SSBP4-212ENST00000601919 COG6Q9Y2V7 657 aa23.54■■□□□ 1.36
SSBP4-212ENST00000601919 TAF1LQ8IZX4 1826 aa23.54■■□□□ 1.36
SSBP4-212ENST00000601919 TNS1Q9HBL0 1735 aaKnown RBP23.53■■□□□ 1.36
SSBP4-212ENST00000601919 APBA3O96018 575 aa23.53■■□□□ 1.36
SSBP4-212ENST00000601919 IL6STP40189 918 aaPredicted RBP23.53■■□□□ 1.36
SSBP4-212ENST00000601919 INTS3Q68E01 1043 aaKnown RBP23.53■■□□□ 1.36
SSBP4-212ENST00000601919 DDX19BQ9UMR2 479 aa23.53■■□□□ 1.36
SSBP4-212ENST00000601919 CNTNAP4Q9C0A0 1308 aa23.53■■□□□ 1.36
SSBP4-212ENST00000601919 N4BP2Q86UW6 1770 aaPredicted RBP23.52■■□□□ 1.36
SSBP4-212ENST00000601919 PI4KAP2A4QPH2 592 aa23.52■■□□□ 1.36
SSBP4-212ENST00000601919 PIP4K2AP48426 406 aaPredicted RBP23.52■■□□□ 1.36
SSBP4-212ENST00000601919 RC3H1Q5TC82 1133 aaKnown RBP23.52■■□□□ 1.36
SSBP4-212ENST00000601919 SLC4A10Q6U841 1118 aa23.52■■□□□ 1.36
SSBP4-212ENST00000601919 RIC3Q7Z5B4 369 aa23.52■■□□□ 1.36
SSBP4-212ENST00000601919 PI4KAP1Q8N8J0 262 aa23.52■■□□□ 1.36
SSBP4-212ENST00000601919 EXOC6Q8TAG9 804 aa23.52■■□□□ 1.36
SSBP4-212ENST00000601919 DNAAF4Q8WXU2 420 aa23.52■■□□□ 1.36
SSBP4-212ENST00000601919 ZBTB1Q9Y2K1 713 aa23.52■■□□□ 1.36
SSBP4-212ENST00000601919 RGPD3A6NKT7 1758 aaPredicted RBP23.52■■□□□ 1.36
SSBP4-212ENST00000601919 RGPD4Q7Z3J3 1758 aa23.52■■□□□ 1.36
SSBP4-212ENST00000601919 INTS5Q6P9B9 1019 aaKnown RBP23.51■■□□□ 1.35
SSBP4-212ENST00000601919 ANKRD13DQ6ZTN6 518 aa23.51■■□□□ 1.35
SSBP4-212ENST00000601919 LINC00116Q8NCU8 138 aa23.51■■□□□ 1.35
SSBP4-212ENST00000601919 F6X3S4 739 aa23.5■■□□□ 1.35
SSBP4-212ENST00000601919 KIF6Q6ZMV9 814 aa23.5■■□□□ 1.35
SSBP4-212ENST00000601919 PLBD2Q8NHP8 589 aa23.5■■□□□ 1.35
SSBP4-212ENST00000601919 ZNF330Q9Y3S2 320 aaPredicted RBP23.5■■□□□ 1.35
SSBP4-212ENST00000601919 MYH14Q7Z406 1995 aaKnown RBP23.5■■□□□ 1.35
SSBP4-212ENST00000601919 SF3B2Q13435 895 aaKnown RBP23.49■■□□□ 1.35
SSBP4-212ENST00000601919 MAP3K2Q9Y2U5 619 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms