RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 TAF7Q15545 349 aaPredicted RBP20.91■□□□□ 0.94
PPFIA4-213ENST00000601609 THUMPD2Q9BTF0 503 aaKnown RBP20.91■□□□□ 0.94
PPFIA4-213ENST00000601609 COL15A1P39059 1388 aa20.9■□□□□ 0.94
PPFIA4-213ENST00000601609 SOS1Q07889 1333 aaPredicted RBP20.9■□□□□ 0.94
PPFIA4-213ENST00000601609 ZPR1O75312 459 aa20.9■□□□□ 0.94
PPFIA4-213ENST00000601609 MMP10P09238 476 aa20.9■□□□□ 0.94
PPFIA4-213ENST00000601609 NEUROD2Q15784 382 aa20.9■□□□□ 0.94
PPFIA4-213ENST00000601609 NPM2Q86SE8 214 aaKnown RBP20.9■□□□□ 0.94
PPFIA4-213ENST00000601609 NLGN1Q8N2Q7 840 aa20.9■□□□□ 0.94
PPFIA4-213ENST00000601609 SRP68Q9UHB9 627 aaKnown RBP20.9■□□□□ 0.94
PPFIA4-213ENST00000601609 RRP7AQ9Y3A4 280 aaKnown RBP20.9■□□□□ 0.94
PPFIA4-213ENST00000601609 LMOD3Q0VAK6 560 aa20.89■□□□□ 0.93
PPFIA4-213ENST00000601609 NLGN2Q8NFZ4 835 aa20.89■□□□□ 0.93
PPFIA4-213ENST00000601609 MIS18AQ9NYP9 233 aa20.89■□□□□ 0.93
PPFIA4-213ENST00000601609 ADAMTS8Q9UP79 889 aa20.89■□□□□ 0.93
PPFIA4-213ENST00000601609 USP42Q9H9J4 1324 aaKnown RBP20.88■□□□□ 0.93
PPFIA4-213ENST00000601609 GYS1P13807 737 aa20.88■□□□□ 0.93
PPFIA4-213ENST00000601609 TMPOP42166 694 aaKnown RBP20.88■□□□□ 0.93
PPFIA4-213ENST00000601609 PNISRQ8TF01 805 aaKnown RBP20.88■□□□□ 0.93
PPFIA4-213ENST00000601609 RUNDC1Q96C34 613 aa20.88■□□□□ 0.93
PPFIA4-213ENST00000601609 GPR162Q16538 588 aa20.87■□□□□ 0.93
PPFIA4-213ENST00000601609 PARP3Q9Y6F1 533 aa20.87■□□□□ 0.93
PPFIA4-213ENST00000601609 SNRPA1P09661 255 aaKnown RBP20.86■□□□□ 0.93
PPFIA4-213ENST00000601609 USPL1Q5W0Q7 1092 aa20.86■□□□□ 0.93
PPFIA4-213ENST00000601609 CD2APQ9Y5K6 639 aa20.86■□□□□ 0.93
PPFIA4-213ENST00000601609 A0A087WZG4 1122 aa20.84■□□□□ 0.93
PPFIA4-213ENST00000601609 KDM3BQ7LBC6 1761 aa20.83■□□□□ 0.93
PPFIA4-213ENST00000601609 PRAMEF22A3QJZ6 481 aa20.83■□□□□ 0.93
PPFIA4-213ENST00000601609 A1BGP04217 495 aa20.83■□□□□ 0.93
PPFIA4-213ENST00000601609 FKBP8Q14318 412 aa20.83■□□□□ 0.93
PPFIA4-213ENST00000601609 NARFQ9UHQ1 456 aa20.83■□□□□ 0.93
PPFIA4-213ENST00000601609 TSPYL4Q9UJ04 414 aa20.83■□□□□ 0.93
PPFIA4-213ENST00000601609 USP16Q9Y5T5 823 aa20.82■□□□□ 0.92
PPFIA4-213ENST00000601609 IL6STP40189 918 aaPredicted RBP20.81■□□□□ 0.92
PPFIA4-213ENST00000601609 PIP4K2AP48426 406 aaPredicted RBP20.81■□□□□ 0.92
PPFIA4-213ENST00000601609 MRS2Q9HD23 443 aa20.81■□□□□ 0.92
PPFIA4-213ENST00000601609 EIF5P55010 431 aaKnown RBP20.8■□□□□ 0.92
PPFIA4-213ENST00000601609 WWC3Q9ULE0 1092 aa20.8■□□□□ 0.92
PPFIA4-213ENST00000601609 LAS1LQ9Y4W2 734 aaKnown RBP20.8■□□□□ 0.92
PPFIA4-213ENST00000601609 LAMB4A4D0S4 1761 aa20.8■□□□□ 0.92
PPFIA4-213ENST00000601609 CCDC184Q52MB2 194 aa20.79■□□□□ 0.92
PPFIA4-213ENST00000601609 TBC1D2BQ9UPU7 963 aa20.79■□□□□ 0.92
PPFIA4-213ENST00000601609 BICDL1Q6ZP65 573 aa20.78■□□□□ 0.92
PPFIA4-213ENST00000601609 YY1P25490 414 aa20.77■□□□□ 0.92
PPFIA4-213ENST00000601609 EIF4A1P60842 406 aaKnown RBP20.77■□□□□ 0.92
PPFIA4-213ENST00000601609 DDR1Q08345 913 aa20.77■□□□□ 0.92
PPFIA4-213ENST00000601609 C10orf71Q711Q0 1435 aa20.77■□□□□ 0.91
PPFIA4-213ENST00000601609 SCN7AQ01118 1682 aa20.77■□□□□ 0.91
PPFIA4-213ENST00000601609 APAF1O14727 1248 aa20.76■□□□□ 0.91
PPFIA4-213ENST00000601609 DZIP3Q86Y13 1208 aaKnown RBP20.76■□□□□ 0.91
PPFIA4-213ENST00000601609 GIGYF1O75420 1035 aaPredicted RBP20.75■□□□□ 0.91
PPFIA4-213ENST00000601609 NFIXQ14938 502 aa20.75■□□□□ 0.91
PPFIA4-213ENST00000601609 POLRMTO00411 1230 aaKnown RBP20.74■□□□□ 0.91
PPFIA4-213ENST00000601609 BCL2L12Q9HB09 334 aa20.74■□□□□ 0.91
PPFIA4-213ENST00000601609 TRIM35Q9UPQ4 493 aa20.74■□□□□ 0.91
PPFIA4-213ENST00000601609 NPHP1O15259 732 aa20.73■□□□□ 0.91
PPFIA4-213ENST00000601609 YBX3P16989 372 aaKnown RBP eCLIP20.73■□□□□ 0.91
PPFIA4-213ENST00000601609 NGEFQ8N5V2 710 aa20.73■□□□□ 0.91
PPFIA4-213ENST00000601609 BABAM1Q9NWV8 329 aa20.73■□□□□ 0.91
PPFIA4-213ENST00000601609 KIF13BQ9NQT8 1826 aa20.72■□□□□ 0.91
PPFIA4-213ENST00000601609 GRIN3BO60391 1043 aa20.72■□□□□ 0.91
PPFIA4-213ENST00000601609 TM4SF1P30408 202 aa20.72■□□□□ 0.91
PPFIA4-213ENST00000601609 PXDNLA1KZ92 1463 aa20.72■□□□□ 0.91
PPFIA4-213ENST00000601609 N4BP2Q86UW6 1770 aaPredicted RBP20.72■□□□□ 0.91
PPFIA4-213ENST00000601609 SENP3-EIF4A1A0A087X0R7 540 aa20.71■□□□□ 0.91
PPFIA4-213ENST00000601609 A0A0G2JLW4 131 aa20.71■□□□□ 0.91
PPFIA4-213ENST00000601609 SERPINB2P05120 415 aa20.71■□□□□ 0.91
PPFIA4-213ENST00000601609 EIF2S2P20042 333 aaKnown RBP20.71■□□□□ 0.91
PPFIA4-213ENST00000601609 TGFB2P61812 414 aa20.71■□□□□ 0.91
PPFIA4-213ENST00000601609 TBC1D9BQ66K14 1250 aa20.71■□□□□ 0.91
PPFIA4-213ENST00000601609 ZNF652Q9Y2D9 606 aa20.71■□□□□ 0.91
PPFIA4-213ENST00000601609 BCORQ6W2J9 1755 aa20.71■□□□□ 0.91
PPFIA4-213ENST00000601609 NBPF26B4DH59 902 aa20.7■□□□□ 0.9
PPFIA4-213ENST00000601609 CAMTA2O94983 1202 aa20.7■□□□□ 0.9
PPFIA4-213ENST00000601609 MYL6BP14649 208 aa20.7■□□□□ 0.9
PPFIA4-213ENST00000601609 NBPF10Q6P3W6 841 aaKnown RBP20.7■□□□□ 0.9
PPFIA4-213ENST00000601609 NBPF15Q8N660 670 aa20.7■□□□□ 0.9
PPFIA4-213ENST00000601609 DPEP1P16444 411 aa20.69■□□□□ 0.9
PPFIA4-213ENST00000601609 CALD1Q05682 793 aaKnown RBP20.69■□□□□ 0.9
PPFIA4-213ENST00000601609 AFDNP55196 1824 aaKnown RBP20.69■□□□□ 0.9
PPFIA4-213ENST00000601609 SETDB2Q96T68 719 aa20.68■□□□□ 0.9
PPFIA4-213ENST00000601609 BCS1LQ9Y276 419 aa20.68■□□□□ 0.9
PPFIA4-213ENST00000601609 CHD4Q14839 1912 aa20.68■□□□□ 0.9
PPFIA4-213ENST00000601609 CARMIL3Q8ND23 1372 aa20.68■□□□□ 0.9
PPFIA4-213ENST00000601609 KIAA1551Q9HCM1 1747 aa20.67■□□□□ 0.9
PPFIA4-213ENST00000601609 KIF6Q6ZMV9 814 aa20.67■□□□□ 0.9
PPFIA4-213ENST00000601609 NECTIN2Q92692 538 aa20.67■□□□□ 0.9
PPFIA4-213ENST00000601609 CHL1O00533 1208 aa20.66■□□□□ 0.9
PPFIA4-213ENST00000601609 ERBB4Q15303 1308 aa20.65■□□□□ 0.9
PPFIA4-213ENST00000601609 KRT24Q2M2I5 525 aa20.65■□□□□ 0.9
PPFIA4-213ENST00000601609 FAM9BQ8IZU0 186 aa20.65■□□□□ 0.9
PPFIA4-213ENST00000601609 CFAP44Q96MT7 982 aa20.65■□□□□ 0.9
PPFIA4-213ENST00000601609 NRXN2Q9P2S2 1712 aa20.64■□□□□ 0.9
PPFIA4-213ENST00000601609 CHRNA5P30532 468 aa20.64■□□□□ 0.89
PPFIA4-213ENST00000601609 GNAI1P63096 354 aa20.64■□□□□ 0.89
PPFIA4-213ENST00000601609 CNBD1Q8NA66 436 aa20.64■□□□□ 0.89
PPFIA4-213ENST00000601609 ST5P78524 1137 aa20.63■□□□□ 0.89
PPFIA4-213ENST00000601609 CLEC4GQ6UXB4 293 aa20.63■□□□□ 0.89
PPFIA4-213ENST00000601609 CCDC24Q8N4L8 307 aa20.63■□□□□ 0.89
PPFIA4-213ENST00000601609 MBIPQ9NS73 344 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms