RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 TRIM37O94972 964 aa28.21■■■□□ 2.11
SNRNP70-209ENST00000601065 SIK1P57059 783 aa28.21■■■□□ 2.11
SNRNP70-209ENST00000601065 CANXP27824 592 aaKnown RBP28.2■■■□□ 2.11
SNRNP70-209ENST00000601065 TEX13AQ9BXU3 409 aaPredicted RBP28.2■■■□□ 2.11
SNRNP70-209ENST00000601065 DBF4Q9UBU7 674 aaPredicted RBP28.2■■■□□ 2.11
SNRNP70-209ENST00000601065 TJP1Q07157 1748 aa28.2■■■□□ 2.1
SNRNP70-209ENST00000601065 CICQ96RK0 1608 aaPredicted RBP28.19■■■□□ 2.1
SNRNP70-209ENST00000601065 DNAJC10Q8IXB1 793 aa28.19■■■□□ 2.1
SNRNP70-209ENST00000601065 ZNF831Q5JPB2 1677 aa28.18■■■□□ 2.1
SNRNP70-209ENST00000601065 ZKSCAN2Q63HK3 967 aa28.18■■■□□ 2.1
SNRNP70-209ENST00000601065 PDIA6Q15084 440 aa28.17■■■□□ 2.1
SNRNP70-209ENST00000601065 IPO8O15397 1037 aaKnown RBP28.16■■■□□ 2.1
SNRNP70-209ENST00000601065 ATP6V1AP38606 617 aa28.16■■■□□ 2.1
SNRNP70-209ENST00000601065 G2E3Q7L622 706 aa28.16■■■□□ 2.1
SNRNP70-209ENST00000601065 DDX21Q9NR30 783 aaKnown RBP eCLIP28.16■■■□□ 2.1
SNRNP70-209ENST00000601065 LY75O60449 1722 aa28.16■■■□□ 2.1
SNRNP70-209ENST00000601065 PROSER3Q2NL68 480 aa28.16■■■□□ 2.1
SNRNP70-209ENST00000601065 ATF7IPQ6VMQ6 1270 aa28.16■■■□□ 2.1
SNRNP70-209ENST00000601065 ARHGAP45Q92619 1136 aa28.16■■■□□ 2.1
SNRNP70-209ENST00000601065 ANXA1P04083 346 aa28.15■■■□□ 2.1
SNRNP70-209ENST00000601065 ERBB4Q15303 1308 aa28.15■■■□□ 2.1
SNRNP70-209ENST00000601065 STARD3NLO95772 234 aa28.14■■■□□ 2.1
SNRNP70-209ENST00000601065 TRIM27P14373 513 aa28.14■■■□□ 2.1
SNRNP70-209ENST00000601065 C20orf194Q5TEA3 1177 aa28.14■■■□□ 2.1
SNRNP70-209ENST00000601065 PTPRCP08575 1304 aa28.14■■■□□ 2.1
SNRNP70-209ENST00000601065 FLIIQ13045 1269 aa28.14■■■□□ 2.09
SNRNP70-209ENST00000601065 PHAXQ9H814 394 aaKnown RBP28.14■■■□□ 2.09
SNRNP70-209ENST00000601065 CYP19A1P11511 503 aaPredicted RBP28.13■■■□□ 2.09
SNRNP70-209ENST00000601065 HYPKQ9NX55 129 aa28.13■■■□□ 2.09
SNRNP70-209ENST00000601065 TNNQ9UQP3 1299 aa28.13■■■□□ 2.09
SNRNP70-209ENST00000601065 A1BGP04217 495 aa28.12■■■□□ 2.09
SNRNP70-209ENST00000601065 ITPK1Q13572 414 aa28.12■■■□□ 2.09
SNRNP70-209ENST00000601065 PDE3AQ14432 1141 aa28.12■■■□□ 2.09
SNRNP70-209ENST00000601065 PIP4K2AP48426 406 aaPredicted RBP28.11■■■□□ 2.09
SNRNP70-209ENST00000601065 NBPF26B4DH59 902 aa28.11■■■□□ 2.09
SNRNP70-209ENST00000601065 MYL6BP14649 208 aa28.11■■■□□ 2.09
SNRNP70-209ENST00000601065 NBPF14Q5TI25 921 aa28.11■■■□□ 2.09
SNRNP70-209ENST00000601065 NBPF10Q6P3W6 841 aaKnown RBP28.11■■■□□ 2.09
SNRNP70-209ENST00000601065 LRP10Q7Z4F1 713 aa28.11■■■□□ 2.09
SNRNP70-209ENST00000601065 NBPF15Q8N660 670 aa28.11■■■□□ 2.09
SNRNP70-209ENST00000601065 COL5A3P25940 1745 aaPredicted RBP28.1■■■□□ 2.09
SNRNP70-209ENST00000601065 CLUAP1Q96AJ1 413 aa28.1■■■□□ 2.09
SNRNP70-209ENST00000601065 API5Q9BZZ5 524 aaKnown RBP28.09■■■□□ 2.09
SNRNP70-209ENST00000601065 ERICH6BQ5W0A0 696 aa28.09■■■□□ 2.09
SNRNP70-209ENST00000601065 DZIP1LQ8IYY4 767 aaKnown RBP28.09■■■□□ 2.09
SNRNP70-209ENST00000601065 TNS1Q9HBL0 1735 aaKnown RBP28.09■■■□□ 2.09
SNRNP70-209ENST00000601065 MS4A1P11836 297 aa28.08■■■□□ 2.09
SNRNP70-209ENST00000601065 RLBP1P12271 317 aa28.08■■■□□ 2.09
SNRNP70-209ENST00000601065 FKBP5Q13451 457 aaPredicted RBP28.08■■■□□ 2.09
SNRNP70-209ENST00000601065 FTSJ3Q8IY81 847 aaKnown RBP28.08■■■□□ 2.09
SNRNP70-209ENST00000601065 PANK1Q8TE04 598 aa28.08■■■□□ 2.09
SNRNP70-209ENST00000601065 CCNL1Q9UK58 526 aaPredicted RBP28.08■■■□□ 2.09
SNRNP70-209ENST00000601065 KCNQ4P56696 695 aa28.07■■■□□ 2.08
SNRNP70-209ENST00000601065 CRKLP46109 303 aaKnown RBP28.05■■■□□ 2.08
SNRNP70-209ENST00000601065 LINC00116Q8NCU8 138 aa28.05■■■□□ 2.08
SNRNP70-209ENST00000601065 ZBTB1Q9Y2K1 713 aa28.05■■■□□ 2.08
SNRNP70-209ENST00000601065 RREB1Q92766 1687 aa28.05■■■□□ 2.08
SNRNP70-209ENST00000601065 ABCC4O15439 1325 aa28.05■■■□□ 2.08
SNRNP70-209ENST00000601065 APBA3O96018 575 aa28.04■■■□□ 2.08
SNRNP70-209ENST00000601065 TAF1LQ8IZX4 1826 aa28.04■■■□□ 2.08
SNRNP70-209ENST00000601065 MYH14Q7Z406 1995 aaKnown RBP28.04■■■□□ 2.08
SNRNP70-209ENST00000601065 PLSCR1O15162 318 aa28.04■■■□□ 2.08
SNRNP70-209ENST00000601065 EXOC6Q8TAG9 804 aa28.04■■■□□ 2.08
SNRNP70-209ENST00000601065 XAGE3Q8WTP9 111 aa28.04■■■□□ 2.08
SNRNP70-209ENST00000601065 CRBNQ96SW2 442 aa28.04■■■□□ 2.08
SNRNP70-209ENST00000601065 AIMP1Q12904 312 aaKnown RBP28.03■■■□□ 2.08
SNRNP70-209ENST00000601065 INTS5Q6P9B9 1019 aaKnown RBP28.03■■■□□ 2.08
SNRNP70-209ENST00000601065 COPS6Q7L5N1 327 aa28.03■■■□□ 2.08
SNRNP70-209ENST00000601065 CCDC87Q9NVE4 849 aa28.03■■■□□ 2.08
SNRNP70-209ENST00000601065 F6X3S4 739 aa28.01■■■□□ 2.08
SNRNP70-209ENST00000601065 SLC27A3Q5K4L6 730 aa28.01■■■□□ 2.08
SNRNP70-209ENST00000601065 LRRC4BQ9NT99 713 aa28.01■■■□□ 2.08
SNRNP70-209ENST00000601065 TMEM57Q8N5G2 664 aa28.01■■■□□ 2.07
SNRNP70-209ENST00000601065 COG6Q9Y2V7 657 aa28.01■■■□□ 2.07
SNRNP70-209ENST00000601065 ADCY9O60503 1353 aa28■■■□□ 2.07
SNRNP70-209ENST00000601065 CNTNAP4Q9C0A0 1308 aa28■■■□□ 2.07
SNRNP70-209ENST00000601065 PI4KAP2A4QPH2 592 aa28■■■□□ 2.07
SNRNP70-209ENST00000601065 PI4KAP1Q8N8J0 262 aa28■■■□□ 2.07
SNRNP70-209ENST00000601065 DDX58O95786 925 aaKnown RBP27.99■■■□□ 2.07
SNRNP70-209ENST00000601065 IL6STP40189 918 aaPredicted RBP27.99■■■□□ 2.07
SNRNP70-209ENST00000601065 RGPD3A6NKT7 1758 aaPredicted RBP27.99■■■□□ 2.07
SNRNP70-209ENST00000601065 RGPD4Q7Z3J3 1758 aa27.99■■■□□ 2.07
SNRNP70-209ENST00000601065 KSR2Q6VAB6 950 aa27.99■■■□□ 2.07
SNRNP70-209ENST00000601065 MVPQ14764 893 aaKnown RBP27.98■■■□□ 2.07
SNRNP70-209ENST00000601065 TXNRD1Q16881 649 aa27.98■■■□□ 2.07
SNRNP70-209ENST00000601065 PROM2Q8N271 834 aa27.98■■■□□ 2.07
SNRNP70-209ENST00000601065 ZNF330Q9Y3S2 320 aaPredicted RBP27.98■■■□□ 2.07
SNRNP70-209ENST00000601065 RC3H1Q5TC82 1133 aaKnown RBP27.97■■■□□ 2.07
SNRNP70-209ENST00000601065 PXDNLA1KZ92 1463 aa27.97■■■□□ 2.07
SNRNP70-209ENST00000601065 C4BP0C0L5 1744 aa27.96■■■□□ 2.07
SNRNP70-209ENST00000601065 INTS3Q68E01 1043 aaKnown RBP27.96■■■□□ 2.07
SNRNP70-209ENST00000601065 SLC4A10Q6U841 1118 aa27.96■■■□□ 2.07
SNRNP70-209ENST00000601065 TTLL7Q6ZT98 887 aa27.96■■■□□ 2.07
SNRNP70-209ENST00000601065 ANKRD13DQ6ZTN6 518 aa27.96■■■□□ 2.07
SNRNP70-209ENST00000601065 ITPRIPQ8IWB1 547 aa27.96■■■□□ 2.07
SNRNP70-209ENST00000601065 DNAAF4Q8WXU2 420 aa27.96■■■□□ 2.07
SNRNP70-209ENST00000601065 EIF5P55010 431 aaKnown RBP27.96■■■□□ 2.07
SNRNP70-209ENST00000601065 PPP4R2Q9NY27 417 aa27.96■■■□□ 2.07
SNRNP70-209ENST00000601065 MAP3K2Q9Y2U5 619 aa27.96■■■□□ 2.07
SNRNP70-209ENST00000601065 RIC3Q7Z5B4 369 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms