RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 ZBTB1Q9Y2K1 713 aa25.41■■□□□ 1.66
FARP1-229ENST00000600190 ARFGEF1Q9Y6D6 1849 aa25.41■■□□□ 1.66
FARP1-229ENST00000600190 KCPQ6ZWJ8 1503 aa25.41■■□□□ 1.66
FARP1-229ENST00000600190 U2SURPO15042 1029 aaKnown RBP25.39■■□□□ 1.66
FARP1-229ENST00000600190 TOMM70O94826 608 aa25.39■■□□□ 1.66
FARP1-229ENST00000600190 VSIG10Q8N0Z9 540 aa25.39■■□□□ 1.66
FARP1-229ENST00000600190 NMRK2Q9NPI5 230 aa25.39■■□□□ 1.66
FARP1-229ENST00000600190 COL15A1P39059 1388 aa25.39■■□□□ 1.65
FARP1-229ENST00000600190 CANXP27824 592 aaKnown RBP25.38■■□□□ 1.65
FARP1-229ENST00000600190 NFIXQ14938 502 aa25.38■■□□□ 1.65
FARP1-229ENST00000600190 TTC5Q8N0Z6 440 aa25.38■■□□□ 1.65
FARP1-229ENST00000600190 RNF181Q9P0P0 153 aa25.35■■□□□ 1.65
FARP1-229ENST00000600190 STARD3NLO95772 234 aa25.34■■□□□ 1.65
FARP1-229ENST00000600190 SERPINB2P05120 415 aa25.34■■□□□ 1.65
FARP1-229ENST00000600190 TEFQ10587 303 aa25.34■■□□□ 1.65
FARP1-229ENST00000600190 BCL2L12Q9HB09 334 aa25.34■■□□□ 1.65
FARP1-229ENST00000600190 GNAT3A8MTJ3 354 aa25.33■■□□□ 1.65
FARP1-229ENST00000600190 IL17REQ8NFR9 667 aa25.33■■□□□ 1.65
FARP1-229ENST00000600190 GAS2L2Q8NHY3 880 aa25.33■■□□□ 1.65
FARP1-229ENST00000600190 AFDNP55196 1824 aaKnown RBP25.33■■□□□ 1.64
FARP1-229ENST00000600190 UBR2Q8IWV8 1755 aa25.32■■□□□ 1.64
FARP1-229ENST00000600190 APLP1P51693 650 aa25.32■■□□□ 1.64
FARP1-229ENST00000600190 C16orf71Q8IYS4 520 aaPredicted RBP25.32■■□□□ 1.64
FARP1-229ENST00000600190 COL3A1P02461 1466 aaPredicted RBP25.32■■□□□ 1.64
FARP1-229ENST00000600190 NPC1L1Q9UHC9 1359 aa25.31■■□□□ 1.64
FARP1-229ENST00000600190 BICDL1Q6ZP65 573 aa25.31■■□□□ 1.64
FARP1-229ENST00000600190 ZNF496Q96IT1 587 aaPredicted RBP25.31■■□□□ 1.64
FARP1-229ENST00000600190 ZNF790Q6PG37 636 aa25.3■■□□□ 1.64
FARP1-229ENST00000600190 KDM2BQ8NHM5 1336 aa25.3■■□□□ 1.64
FARP1-229ENST00000600190 EIF5P55010 431 aaKnown RBP25.29■■□□□ 1.64
FARP1-229ENST00000600190 IFFO2Q5TF58 517 aa25.29■■□□□ 1.64
FARP1-229ENST00000600190 ZNF330Q9Y3S2 320 aaPredicted RBP25.29■■□□□ 1.64
FARP1-229ENST00000600190 A0A087WZG4 1122 aa25.28■■□□□ 1.64
FARP1-229ENST00000600190 C2CD5Q86YS7 1000 aa25.28■■□□□ 1.64
FARP1-229ENST00000600190 TEX13AQ9BXU3 409 aaPredicted RBP25.28■■□□□ 1.64
FARP1-229ENST00000600190 NRXN2Q9P2S2 1712 aa25.28■■□□□ 1.64
FARP1-229ENST00000600190 RASSF7Q02833 373 aa25.27■■□□□ 1.64
FARP1-229ENST00000600190 RBM46Q8TBY0 533 aaKnown RBP25.27■■□□□ 1.64
FARP1-229ENST00000600190 RRAGCQ9HB90 399 aa25.27■■□□□ 1.64
FARP1-229ENST00000600190 SBF1O95248 1867 aa25.27■■□□□ 1.64
FARP1-229ENST00000600190 HEG1Q9ULI3 1381 aa25.27■■□□□ 1.64
FARP1-229ENST00000600190 H0YIN7 160 aa25.26■■□□□ 1.63
FARP1-229ENST00000600190 TTLL6Q8N841 843 aa25.26■■□□□ 1.63
FARP1-229ENST00000600190 PHACTR3Q96KR7 559 aa25.25■■□□□ 1.63
FARP1-229ENST00000600190 CFAP53Q96M91 514 aa25.25■■□□□ 1.63
FARP1-229ENST00000600190 TBC1D2BQ9UPU7 963 aa25.25■■□□□ 1.63
FARP1-229ENST00000600190 CARMIL3Q8ND23 1372 aa25.24■■□□□ 1.63
FARP1-229ENST00000600190 TBC1D9BQ66K14 1250 aa25.24■■□□□ 1.63
FARP1-229ENST00000600190 FMNL2Q96PY5 1086 aa25.24■■□□□ 1.63
FARP1-229ENST00000600190 PRKAR2BP31323 418 aa25.23■■□□□ 1.63
FARP1-229ENST00000600190 NPM2Q86SE8 214 aaKnown RBP25.23■■□□□ 1.63
FARP1-229ENST00000600190 SIPA1L3O60292 1781 aaPredicted RBP25.23■■□□□ 1.63
FARP1-229ENST00000600190 BTBD11A6QL63 1104 aa25.22■■□□□ 1.63
FARP1-229ENST00000600190 LMNB1P20700 586 aa25.22■■□□□ 1.63
FARP1-229ENST00000600190 IL6STP40189 918 aaPredicted RBP25.22■■□□□ 1.63
FARP1-229ENST00000600190 DNAJC5GQ8N7S2 189 aa25.22■■□□□ 1.63
FARP1-229ENST00000600190 DLEC1Q9Y238 1755 aa25.21■■□□□ 1.63
FARP1-229ENST00000600190 A1BGP04217 495 aa25.21■■□□□ 1.63
FARP1-229ENST00000600190 RSPH6AQ9H0K4 717 aa25.21■■□□□ 1.63
FARP1-229ENST00000600190 KCNQ3O43525 872 aa25.2■■□□□ 1.62
FARP1-229ENST00000600190 FSTL1Q12841 308 aa25.2■■□□□ 1.62
FARP1-229ENST00000600190 CCDC24Q8N4L8 307 aa25.2■■□□□ 1.62
FARP1-229ENST00000600190 ZNF622Q969S3 477 aaKnown RBP eCLIP25.2■■□□□ 1.62
FARP1-229ENST00000600190 CEMIPQ8WUJ3 1361 aa25.19■■□□□ 1.62
FARP1-229ENST00000600190 PRELPP51888 382 aa25.19■■□□□ 1.62
FARP1-229ENST00000600190 NUDCQ9Y266 331 aa25.19■■□□□ 1.62
FARP1-229ENST00000600190 ZC3H4Q9UPT8 1303 aaKnown RBP25.18■■□□□ 1.62
FARP1-229ENST00000600190 TNRC6CQ9HCJ0 1690 aaKnown RBP25.18■■□□□ 1.62
FARP1-229ENST00000600190 PDE6BP35913 854 aa25.18■■□□□ 1.62
FARP1-229ENST00000600190 BRIP1Q9BX63 1249 aa25.18■■□□□ 1.62
FARP1-229ENST00000600190 NPHP1O15259 732 aa25.17■■□□□ 1.62
FARP1-229ENST00000600190 U2AF1L5P0DN76 240 aaPredicted RBP25.17■■□□□ 1.62
FARP1-229ENST00000600190 HTRA3P83110 453 aa25.17■■□□□ 1.62
FARP1-229ENST00000600190 U2AF1Q01081 240 aaKnown RBP eCLIP25.17■■□□□ 1.62
FARP1-229ENST00000600190 PRR5LQ6MZQ0 368 aa25.17■■□□□ 1.62
FARP1-229ENST00000600190 SETDB2Q96T68 719 aa25.17■■□□□ 1.62
FARP1-229ENST00000600190 ZNF219Q9P2Y4 722 aaPredicted RBP25.17■■□□□ 1.62
FARP1-229ENST00000600190 SCN7AQ01118 1682 aa25.17■■□□□ 1.62
FARP1-229ENST00000600190 WDR90Q96KV7 1748 aa25.16■■□□□ 1.62
FARP1-229ENST00000600190 GLTPD2A6NH11 291 aa25.15■■□□□ 1.62
FARP1-229ENST00000600190 RTF1Q92541 710 aaKnown RBP25.15■■□□□ 1.62
FARP1-229ENST00000600190 PDZRN3Q9UPQ7 1066 aa25.15■■□□□ 1.62
FARP1-229ENST00000600190 USP16Q9Y5T5 823 aa25.15■■□□□ 1.62
FARP1-229ENST00000600190 ANKRD31Q8N7Z5 1873 aa25.15■■□□□ 1.62
FARP1-229ENST00000600190 NFKBIEO00221 500 aa25.14■■□□□ 1.62
FARP1-229ENST00000600190 C21orf2O43822 256 aa25.14■■□□□ 1.62
FARP1-229ENST00000600190 CAMTA2O94983 1202 aa25.14■■□□□ 1.62
FARP1-229ENST00000600190 PPP2R1AP30153 589 aa25.14■■□□□ 1.62
FARP1-229ENST00000600190 PIP4K2AP48426 406 aaPredicted RBP25.14■■□□□ 1.62
FARP1-229ENST00000600190 MCM10Q7L590 875 aa25.14■■□□□ 1.62
FARP1-229ENST00000600190 DZIP3Q86Y13 1208 aaKnown RBP25.14■■□□□ 1.62
FARP1-229ENST00000600190 CCDC88AQ3V6T2 1871 aa25.14■■□□□ 1.61
FARP1-229ENST00000600190 CNBD1Q8NA66 436 aa25.13■■□□□ 1.61
FARP1-229ENST00000600190 SMC1BQ8NDV3 1235 aa25.13■■□□□ 1.61
FARP1-229ENST00000600190 PRAMEF22A3QJZ6 481 aa25.12■■□□□ 1.61
FARP1-229ENST00000600190 VEGFAP15692 232 aaPredicted RBP25.12■■□□□ 1.61
FARP1-229ENST00000600190 ST5P78524 1137 aa25.11■■□□□ 1.61
FARP1-229ENST00000600190 DCTN1Q14203 1278 aa25.1■■□□□ 1.61
FARP1-229ENST00000600190 TIAM2Q8IVF5 1701 aa25.09■■□□□ 1.61
FARP1-229ENST00000600190 SNRPA1P09661 255 aaKnown RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms