RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 JMYQ8N9B5 988 aa20.43■□□□□ 0.86
XRCC1-209ENST00000599693 SLC52A2Q9HAB3 445 aa20.43■□□□□ 0.86
XRCC1-209ENST00000599693 RRAGCQ9HB90 399 aa20.43■□□□□ 0.86
XRCC1-209ENST00000599693 CLSPNQ9HAW4 1339 aa20.43■□□□□ 0.86
XRCC1-209ENST00000599693 HSPA5P11021 654 aaKnown RBP20.42■□□□□ 0.86
XRCC1-209ENST00000599693 ZC3H4Q9UPT8 1303 aaKnown RBP20.42■□□□□ 0.86
XRCC1-209ENST00000599693 COL15A1P39059 1388 aa20.41■□□□□ 0.86
XRCC1-209ENST00000599693 PCNTO95613 3336 aa20.41■□□□□ 0.86
XRCC1-209ENST00000599693 CYP19A1P11511 503 aaPredicted RBP20.4■□□□□ 0.86
XRCC1-209ENST00000599693 RASSF7Q02833 373 aa20.4■□□□□ 0.86
XRCC1-209ENST00000599693 SMC1BQ8NDV3 1235 aa20.4■□□□□ 0.86
XRCC1-209ENST00000599693 TIAM2Q8IVF5 1701 aa20.39■□□□□ 0.86
XRCC1-209ENST00000599693 NFIXQ14938 502 aa20.39■□□□□ 0.85
XRCC1-209ENST00000599693 NARFQ9UHQ1 456 aa20.39■□□□□ 0.85
XRCC1-209ENST00000599693 LGR6Q9HBX8 967 aa20.38■□□□□ 0.85
XRCC1-209ENST00000599693 UBR2Q8IWV8 1755 aa20.37■□□□□ 0.85
XRCC1-209ENST00000599693 RNMTO43148 476 aaKnown RBP20.37■□□□□ 0.85
XRCC1-209ENST00000599693 LMNB1P20700 586 aa20.37■□□□□ 0.85
XRCC1-209ENST00000599693 SLC39A6Q13433 755 aa20.37■□□□□ 0.85
XRCC1-209ENST00000599693 ZBTB1Q9Y2K1 713 aa20.37■□□□□ 0.85
XRCC1-209ENST00000599693 KNSTRNQ9Y448 316 aa20.37■□□□□ 0.85
XRCC1-209ENST00000599693 SERPINB2P05120 415 aa20.35■□□□□ 0.85
XRCC1-209ENST00000599693 COL13A1Q5TAT6 717 aaPredicted RBP20.35■□□□□ 0.85
XRCC1-209ENST00000599693 TTLL6Q8N841 843 aa20.35■□□□□ 0.85
XRCC1-209ENST00000599693 BCL2L12Q9HB09 334 aa20.35■□□□□ 0.85
XRCC1-209ENST00000599693 CCDC88AQ3V6T2 1871 aa20.35■□□□□ 0.85
XRCC1-209ENST00000599693 GLTPD2A6NH11 291 aa20.34■□□□□ 0.85
XRCC1-209ENST00000599693 PRELPP51888 382 aa20.34■□□□□ 0.85
XRCC1-209ENST00000599693 VSIG10Q8N0Z9 540 aa20.34■□□□□ 0.85
XRCC1-209ENST00000599693 CARMIL3Q8ND23 1372 aa20.34■□□□□ 0.85
XRCC1-209ENST00000599693 VEGFAP15692 232 aaPredicted RBP20.33■□□□□ 0.85
XRCC1-209ENST00000599693 C2CD5Q86YS7 1000 aa20.33■□□□□ 0.85
XRCC1-209ENST00000599693 HMOX1P09601 288 aa20.32■□□□□ 0.84
XRCC1-209ENST00000599693 AMER1Q5JTC6 1135 aaPredicted RBP20.32■□□□□ 0.84
XRCC1-209ENST00000599693 SCN7AQ01118 1682 aa20.32■□□□□ 0.84
XRCC1-209ENST00000599693 ANKRD31Q8N7Z5 1873 aa20.31■□□□□ 0.84
XRCC1-209ENST00000599693 H0YIN7 160 aa20.31■□□□□ 0.84
XRCC1-209ENST00000599693 NFKBIEO00221 500 aa20.31■□□□□ 0.84
XRCC1-209ENST00000599693 MTHFSDQ2M296 383 aaKnown RBP20.3■□□□□ 0.84
XRCC1-209ENST00000599693 CANXP27824 592 aaKnown RBP20.29■□□□□ 0.84
XRCC1-209ENST00000599693 PCGF6Q9BYE7 350 aa20.29■□□□□ 0.84
XRCC1-209ENST00000599693 COL11A2P13942 1736 aaPredicted RBP20.29■□□□□ 0.84
XRCC1-209ENST00000599693 STARD3NLO95772 234 aa20.28■□□□□ 0.84
XRCC1-209ENST00000599693 EIF5P55010 431 aaKnown RBP20.28■□□□□ 0.84
XRCC1-209ENST00000599693 DICER1Q9UPY3 1922 aaKnown RBP20.27■□□□□ 0.84
XRCC1-209ENST00000599693 A0A087WZG4 1122 aa20.27■□□□□ 0.84
XRCC1-209ENST00000599693 BICDL1Q6ZP65 573 aa20.27■□□□□ 0.84
XRCC1-209ENST00000599693 TNS4Q8IZW8 715 aa20.27■□□□□ 0.84
XRCC1-209ENST00000599693 TTC5Q8N0Z6 440 aa20.27■□□□□ 0.84
XRCC1-209ENST00000599693 FER1L6Q2WGJ9 1857 aa20.26■□□□□ 0.83
XRCC1-209ENST00000599693 PDZRN3Q9UPQ7 1066 aa20.26■□□□□ 0.83
XRCC1-209ENST00000599693 SIPA1L3O60292 1781 aaPredicted RBP20.26■□□□□ 0.83
XRCC1-209ENST00000599693 DIAPH1O60610 1272 aaKnown RBP20.25■□□□□ 0.83
XRCC1-209ENST00000599693 TBC1D9BQ66K14 1250 aa20.25■□□□□ 0.83
XRCC1-209ENST00000599693 POTECB2RU33 542 aa20.24■□□□□ 0.83
XRCC1-209ENST00000599693 CAPN15O75808 1086 aa20.24■□□□□ 0.83
XRCC1-209ENST00000599693 ZNF622Q969S3 477 aaKnown RBP eCLIP20.24■□□□□ 0.839e-6■■□□□ 12.8
XRCC1-209ENST00000599693 BRIP1Q9BX63 1249 aa20.24■□□□□ 0.83
XRCC1-209ENST00000599693 HEG1Q9ULI3 1381 aa20.23■□□□□ 0.83
XRCC1-209ENST00000599693 HSPA1AP0DMV8 641 aaKnown RBP20.23■□□□□ 0.83
XRCC1-209ENST00000599693 HSPA1BP0DMV9 641 aaKnown RBP20.23■□□□□ 0.83
XRCC1-209ENST00000599693 PDE6BP35913 854 aa20.23■□□□□ 0.83
XRCC1-209ENST00000599693 DPY19L2Q6NUT2 758 aa20.23■□□□□ 0.83
XRCC1-209ENST00000599693 C21orf2O43822 256 aa20.22■□□□□ 0.83
XRCC1-209ENST00000599693 PRR5LQ6MZQ0 368 aa20.22■□□□□ 0.83
XRCC1-209ENST00000599693 ZNF496Q96IT1 587 aaPredicted RBP20.22■□□□□ 0.83
XRCC1-209ENST00000599693 TEFQ10587 303 aa20.21■□□□□ 0.83
XRCC1-209ENST00000599693 ERFEQ4G0M1 354 aa20.21■□□□□ 0.83
XRCC1-209ENST00000599693 ZNF790Q6PG37 636 aa20.21■□□□□ 0.83
XRCC1-209ENST00000599693 TEX13AQ9BXU3 409 aaPredicted RBP20.21■□□□□ 0.83
XRCC1-209ENST00000599693 COL3A1P02461 1466 aaPredicted RBP20.21■□□□□ 0.83
XRCC1-209ENST00000599693 KIF7Q2M1P5 1343 aa20.21■□□□□ 0.83
XRCC1-209ENST00000599693 LTBP3Q9NS15 1303 aa20.21■□□□□ 0.83
XRCC1-209ENST00000599693 BCORQ6W2J9 1755 aa20.21■□□□□ 0.83
XRCC1-209ENST00000599693 ARFGEF2Q9Y6D5 1785 aa20.21■□□□□ 0.83
XRCC1-209ENST00000599693 CACNA1SQ13698 1873 aa20.2■□□□□ 0.82
XRCC1-209ENST00000599693 IL6STP40189 918 aaPredicted RBP20.2■□□□□ 0.82
XRCC1-209ENST00000599693 ZNF219Q9P2Y4 722 aaPredicted RBP20.2■□□□□ 0.82
XRCC1-209ENST00000599693 TBC1D2BQ9UPU7 963 aa20.2■□□□□ 0.82
XRCC1-209ENST00000599693 ZNF330Q9Y3S2 320 aaPredicted RBP20.2■□□□□ 0.82
XRCC1-209ENST00000599693 CCDC24Q8N4L8 307 aa20.19■□□□□ 0.82
XRCC1-209ENST00000599693 SLX4Q8IY92 1834 aa20.18■□□□□ 0.82
XRCC1-209ENST00000599693 GNAT3A8MTJ3 354 aa20.18■□□□□ 0.82
XRCC1-209ENST00000599693 CNBD1Q8NA66 436 aa20.18■□□□□ 0.82
XRCC1-209ENST00000599693 IL17REQ8NFR9 667 aa20.18■□□□□ 0.82
XRCC1-209ENST00000599693 GAS2L2Q8NHY3 880 aa20.18■□□□□ 0.82
XRCC1-209ENST00000599693 TAOK3Q9H2K8 898 aa20.18■□□□□ 0.82
XRCC1-209ENST00000599693 PER1O15534 1290 aaPredicted RBP20.17■□□□□ 0.82
XRCC1-209ENST00000599693 CC2D1BQ5T0F9 858 aaKnown RBP20.17■□□□□ 0.82
XRCC1-209ENST00000599693 FMNL2Q96PY5 1086 aa20.17■□□□□ 0.82
XRCC1-209ENST00000599693 CAMTA2O94983 1202 aa20.16■□□□□ 0.82
XRCC1-209ENST00000599693 STYK1Q6J9G0 422 aa20.16■□□□□ 0.82
XRCC1-209ENST00000599693 CHADLQ6NUI6 762 aa20.16■□□□□ 0.82
XRCC1-209ENST00000599693 CNKSR1Q969H4 720 aa20.16■□□□□ 0.82
XRCC1-209ENST00000599693 SETDB2Q96T68 719 aa20.16■□□□□ 0.82
XRCC1-209ENST00000599693 CREBZFQ9NS37 354 aa20.16■□□□□ 0.82
XRCC1-209ENST00000599693 U2SURPO15042 1029 aaKnown RBP20.15■□□□□ 0.82
XRCC1-209ENST00000599693 NPHP1O15259 732 aa20.15■□□□□ 0.82
XRCC1-209ENST00000599693 A1BGP04217 495 aa20.15■□□□□ 0.82
XRCC1-209ENST00000599693 ST5P78524 1137 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms