RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 STARD3NLO95772 234 aa30.05■■■□□ 2.4
IRF3-220ENST00000598108 UBR2Q8IWV8 1755 aa30.05■■■□□ 2.4
IRF3-220ENST00000598108 TEX13AQ9BXU3 409 aaPredicted RBP30.04■■■□□ 2.4
IRF3-220ENST00000598108 SRP68Q9UHB9 627 aaKnown RBP30.04■■■□□ 2.4
IRF3-220ENST00000598108 COL24A1Q17RW2 1714 aa30.04■■■□□ 2.4
IRF3-220ENST00000598108 CANXP27824 592 aaKnown RBP30.03■■■□□ 2.4
IRF3-220ENST00000598108 USP16Q9Y5T5 823 aa30.03■■■□□ 2.4
IRF3-220ENST00000598108 GYS1P13807 737 aa30.02■■■□□ 2.4
IRF3-220ENST00000598108 PNISRQ8TF01 805 aaKnown RBP30.02■■■□□ 2.4
IRF3-220ENST00000598108 TRIM35Q9UPQ4 493 aa30.02■■■□□ 2.4
IRF3-220ENST00000598108 A1BGP04217 495 aa30.01■■■□□ 2.39
IRF3-220ENST00000598108 KLHL34Q8N239 644 aa30.01■■■□□ 2.39
IRF3-220ENST00000598108 DLG5Q8TDM6 1919 aa30■■■□□ 2.39
IRF3-220ENST00000598108 SNRPA1P09661 255 aaKnown RBP30■■■□□ 2.39
IRF3-220ENST00000598108 LMOD3Q0VAK6 560 aa30■■■□□ 2.39
IRF3-220ENST00000598108 NLGN1Q8N2Q7 840 aa29.99■■■□□ 2.39
IRF3-220ENST00000598108 MRS2Q9HD23 443 aa29.99■■■□□ 2.39
IRF3-220ENST00000598108 USP42Q9H9J4 1324 aaKnown RBP29.98■■■□□ 2.39
IRF3-220ENST00000598108 APAF1O14727 1248 aa29.98■■■□□ 2.39
IRF3-220ENST00000598108 MMP10P09238 476 aa29.98■■■□□ 2.39
IRF3-220ENST00000598108 EIF5P55010 431 aaKnown RBP29.98■■■□□ 2.39
IRF3-220ENST00000598108 EIF4A1P60842 406 aaKnown RBP29.97■■■□□ 2.39
IRF3-220ENST00000598108 FKBP8Q14318 412 aa29.96■■■□□ 2.39
IRF3-220ENST00000598108 COL15A1P39059 1388 aa29.95■■■□□ 2.39
IRF3-220ENST00000598108 NLGN2Q8NFZ4 835 aa29.95■■■□□ 2.39
IRF3-220ENST00000598108 USPL1Q5W0Q7 1092 aa29.94■■■□□ 2.38
IRF3-220ENST00000598108 TSPYL4Q9UJ04 414 aa29.94■■■□□ 2.38
IRF3-220ENST00000598108 ZPR1O75312 459 aa29.93■■■□□ 2.38
IRF3-220ENST00000598108 PIP4K2AP48426 406 aaPredicted RBP29.93■■■□□ 2.38
IRF3-220ENST00000598108 NARFQ9UHQ1 456 aa29.93■■■□□ 2.38
IRF3-220ENST00000598108 GIGYF1O75420 1035 aaPredicted RBP29.92■■■□□ 2.38
IRF3-220ENST00000598108 IL6STP40189 918 aaPredicted RBP29.91■■■□□ 2.38
IRF3-220ENST00000598108 BCL2L12Q9HB09 334 aa29.91■■■□□ 2.38
IRF3-220ENST00000598108 ZNF330Q9Y3S2 320 aaPredicted RBP29.91■■■□□ 2.38
IRF3-220ENST00000598108 BABAM1Q9NWV8 329 aa29.9■■■□□ 2.38
IRF3-220ENST00000598108 CD2APQ9Y5K6 639 aa29.9■■■□□ 2.38
IRF3-220ENST00000598108 NBPF26B4DH59 902 aa29.89■■■□□ 2.38
IRF3-220ENST00000598108 CHL1O00533 1208 aa29.89■■■□□ 2.38
IRF3-220ENST00000598108 NBPF10Q6P3W6 841 aaKnown RBP29.89■■■□□ 2.38
IRF3-220ENST00000598108 NBPF15Q8N660 670 aa29.89■■■□□ 2.38
IRF3-220ENST00000598108 SENP3-EIF4A1A0A087X0R7 540 aa29.88■■■□□ 2.37
IRF3-220ENST00000598108 TM4SF1P30408 202 aa29.88■■■□□ 2.37
IRF3-220ENST00000598108 TBC1D2BQ9UPU7 963 aa29.88■■■□□ 2.37
IRF3-220ENST00000598108 C4AP0C0L4 1744 aa29.88■■■□□ 2.37
IRF3-220ENST00000598108 A0A087WZG4 1122 aa29.87■■■□□ 2.37
IRF3-220ENST00000598108 DDR1Q08345 913 aa29.87■■■□□ 2.37
IRF3-220ENST00000598108 LAS1LQ9Y4W2 734 aaKnown RBP29.87■■■□□ 2.37
IRF3-220ENST00000598108 PARP3Q9Y6F1 533 aa29.85■■■□□ 2.37
IRF3-220ENST00000598108 KDM3BQ7LBC6 1761 aa29.84■■■□□ 2.37
IRF3-220ENST00000598108 NFIXQ14938 502 aa29.83■■■□□ 2.37
IRF3-220ENST00000598108 DCAF8L1A6NGE4 600 aa29.81■■■□□ 2.36
IRF3-220ENST00000598108 POLRMTO00411 1230 aaKnown RBP29.81■■■□□ 2.36
IRF3-220ENST00000598108 CAMTA2O94983 1202 aa29.81■■■□□ 2.36
IRF3-220ENST00000598108 KRT24Q2M2I5 525 aa29.81■■■□□ 2.36
IRF3-220ENST00000598108 NPM2Q86SE8 214 aaKnown RBP29.8■■■□□ 2.36
IRF3-220ENST00000598108 DZIP3Q86Y13 1208 aaKnown RBP29.8■■■□□ 2.36
IRF3-220ENST00000598108 CFAP44Q96MT7 982 aa29.8■■■□□ 2.36
IRF3-220ENST00000598108 ZNF853P0CG23 659 aa29.79■■■□□ 2.36
IRF3-220ENST00000598108 GPR162Q16538 588 aa29.77■■■□□ 2.36
IRF3-220ENST00000598108 TBC1D9BQ66K14 1250 aa29.77■■■□□ 2.36
IRF3-220ENST00000598108 BICDL1Q6ZP65 573 aa29.77■■■□□ 2.36
IRF3-220ENST00000598108 FAM9BQ8IZU0 186 aa29.77■■■□□ 2.36
IRF3-220ENST00000598108 MBIPQ9NS73 344 aa29.77■■■□□ 2.36
IRF3-220ENST00000598108 EIF2S2P20042 333 aaKnown RBP29.76■■■□□ 2.35
IRF3-220ENST00000598108 PELP1Q8IZL8 1130 aaKnown RBP29.76■■■□□ 2.35
IRF3-220ENST00000598108 NGEFQ8N5V2 710 aa29.76■■■□□ 2.35
IRF3-220ENST00000598108 C10orf71Q711Q0 1435 aa29.74■■■□□ 2.35
IRF3-220ENST00000598108 UTRNP46939 3433 aa29.74■■■□□ 2.35
IRF3-220ENST00000598108 YBX3P16989 372 aaKnown RBP eCLIP29.74■■■□□ 2.35
IRF3-220ENST00000598108 GOLGB1Q14789 3259 aaKnown RBP29.74■■■□□ 2.35
IRF3-220ENST00000598108 SERPINB2P05120 415 aa29.73■■■□□ 2.35
IRF3-220ENST00000598108 MYL6BP14649 208 aa29.73■■■□□ 2.35
IRF3-220ENST00000598108 PDIA6Q15084 440 aa29.73■■■□□ 2.35
IRF3-220ENST00000598108 IFT57Q9NWB7 429 aa29.73■■■□□ 2.35
IRF3-220ENST00000598108 WWC3Q9ULE0 1092 aa29.73■■■□□ 2.35
IRF3-220ENST00000598108 A0A0G2JLW4 131 aa29.72■■■□□ 2.35
IRF3-220ENST00000598108 CALD1Q05682 793 aaKnown RBP29.72■■■□□ 2.35
IRF3-220ENST00000598108 CCDC27Q2M243 656 aa29.72■■■□□ 2.35
IRF3-220ENST00000598108 WWC1Q8IX03 1113 aa29.72■■■□□ 2.35
IRF3-220ENST00000598108 NECTIN2Q92692 538 aa29.72■■■□□ 2.35
IRF3-220ENST00000598108 TGFB2P61812 414 aa29.71■■■□□ 2.35
IRF3-220ENST00000598108 GNAI1P63096 354 aa29.71■■■□□ 2.35
IRF3-220ENST00000598108 PROSER3Q2NL68 480 aa29.7■■■□□ 2.35
IRF3-220ENST00000598108 TTLL7Q6ZT98 887 aa29.7■■■□□ 2.35
IRF3-220ENST00000598108 LRP10Q7Z4F1 713 aa29.7■■■□□ 2.35
IRF3-220ENST00000598108 ANXA1P04083 346 aa29.69■■■□□ 2.34
IRF3-220ENST00000598108 DPEP1P16444 411 aa29.69■■■□□ 2.34
IRF3-220ENST00000598108 HLFQ16534 295 aa29.69■■■□□ 2.34
IRF3-220ENST00000598108 CLEC4GQ6UXB4 293 aa29.69■■■□□ 2.34
IRF3-220ENST00000598108 SALL2Q9Y467 1007 aaPredicted RBP29.69■■■□□ 2.34
IRF3-220ENST00000598108 ERBB4Q15303 1308 aa29.69■■■□□ 2.34
IRF3-220ENST00000598108 PXDNLA1KZ92 1463 aa29.68■■■□□ 2.34
IRF3-220ENST00000598108 NCBP3Q53F19 620 aaKnown RBP29.67■■■□□ 2.34
IRF3-220ENST00000598108 DUSP27Q5VZP5 1158 aa29.67■■■□□ 2.34
IRF3-220ENST00000598108 SETDB2Q96T68 719 aa29.67■■■□□ 2.34
IRF3-220ENST00000598108 KCNA3P22001 575 aa29.66■■■□□ 2.34
IRF3-220ENST00000598108 LAMB4A4D0S4 1761 aa29.66■■■□□ 2.34
IRF3-220ENST00000598108 ZNF652Q9Y2D9 606 aa29.64■■■□□ 2.34
IRF3-220ENST00000598108 MAP3K15Q6ZN16 1313 aa29.64■■■□□ 2.34
IRF3-220ENST00000598108 SCN7AQ01118 1682 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms