RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 PRKAR2BP31323 418 aa20.35■□□□□ 0.85
TGFB1-202ENST00000597453 CFAP53Q96M91 514 aa20.35■□□□□ 0.85
TGFB1-202ENST00000597453 RSPH6AQ9H0K4 717 aa20.35■□□□□ 0.85
TGFB1-202ENST00000597453 POLRMTO00411 1230 aaKnown RBP20.34■□□□□ 0.85
TGFB1-202ENST00000597453 ZPR1O75312 459 aa20.34■□□□□ 0.85
TGFB1-202ENST00000597453 KCNA3P22001 575 aa20.34■□□□□ 0.85
TGFB1-202ENST00000597453 TM4SF1P30408 202 aa20.34■□□□□ 0.85
TGFB1-202ENST00000597453 TEFQ10587 303 aa20.34■□□□□ 0.85
TGFB1-202ENST00000597453 ZNF526Q8TF50 670 aaPredicted RBP20.34■□□□□ 0.85
TGFB1-202ENST00000597453 TTC5Q8N0Z6 440 aa20.33■□□□□ 0.85
TGFB1-202ENST00000597453 ZNF496Q96IT1 587 aaPredicted RBP20.33■□□□□ 0.85
TGFB1-202ENST00000597453 GPBP1L1Q9HC44 474 aaPredicted RBP20.33■□□□□ 0.85
TGFB1-202ENST00000597453 NARFQ9UHQ1 456 aa20.33■□□□□ 0.85
TGFB1-202ENST00000597453 NRXN2Q9P2S2 1712 aa20.33■□□□□ 0.84
TGFB1-202ENST00000597453 FCHSD2O94868 740 aa20.32■□□□□ 0.84
TGFB1-202ENST00000597453 BCL2L12Q9HB09 334 aa20.32■□□□□ 0.84
TGFB1-202ENST00000597453 CEMIPQ8WUJ3 1361 aa20.32■□□□□ 0.84
TGFB1-202ENST00000597453 CANXP27824 592 aaKnown RBP20.31■□□□□ 0.84
TGFB1-202ENST00000597453 ZNF790Q6PG37 636 aa20.31■□□□□ 0.84
TGFB1-202ENST00000597453 HEG1Q9ULI3 1381 aa20.31■□□□□ 0.84
TGFB1-202ENST00000597453 NFIXQ14938 502 aa20.3■□□□□ 0.84
TGFB1-202ENST00000597453 U2AF1L5P0DN76 240 aaPredicted RBP20.29■□□□□ 0.84
TGFB1-202ENST00000597453 CHRNA5P30532 468 aa20.29■□□□□ 0.84
TGFB1-202ENST00000597453 U2AF1Q01081 240 aaKnown RBP eCLIP20.29■□□□□ 0.84
TGFB1-202ENST00000597453 ARHGAP27Q6ZUM4 889 aa20.29■□□□□ 0.84
TGFB1-202ENST00000597453 NUDCQ9Y266 331 aa20.29■□□□□ 0.84
TGFB1-202ENST00000597453 SCN7AQ01118 1682 aa20.29■□□□□ 0.84
TGFB1-202ENST00000597453 STARD3NLO95772 234 aa20.28■□□□□ 0.84
TGFB1-202ENST00000597453 EIF5P55010 431 aaKnown RBP20.28■□□□□ 0.84
TGFB1-202ENST00000597453 PIM2Q9P1W9 311 aa20.28■□□□□ 0.84
TGFB1-202ENST00000597453 DLEC1Q9Y238 1755 aa20.27■□□□□ 0.84
TGFB1-202ENST00000597453 KCNQ3O43525 872 aa20.27■□□□□ 0.84
TGFB1-202ENST00000597453 BTBD11A6QL63 1104 aa20.25■□□□□ 0.83
TGFB1-202ENST00000597453 DALRD3Q5D0E6 543 aaKnown RBP20.25■□□□□ 0.83
TGFB1-202ENST00000597453 FMNL2Q96PY5 1086 aa20.25■□□□□ 0.83
TGFB1-202ENST00000597453 CARMIL3Q8ND23 1372 aa20.24■□□□□ 0.83
TGFB1-202ENST00000597453 SERPINB2P05120 415 aa20.24■□□□□ 0.83
TGFB1-202ENST00000597453 MCM10Q7L590 875 aa20.24■□□□□ 0.83
TGFB1-202ENST00000597453 TEX13AQ9BXU3 409 aaPredicted RBP20.24■□□□□ 0.83
TGFB1-202ENST00000597453 SBF1O95248 1867 aa20.24■□□□□ 0.83
TGFB1-202ENST00000597453 DLG5Q8TDM6 1919 aa20.23■□□□□ 0.83
TGFB1-202ENST00000597453 A0A087WZG4 1122 aa20.23■□□□□ 0.83
TGFB1-202ENST00000597453 A1BGP04217 495 aa20.23■□□□□ 0.83
TGFB1-202ENST00000597453 ANKRD31Q8N7Z5 1873 aa20.23■□□□□ 0.83
TGFB1-202ENST00000597453 ZNF330Q9Y3S2 320 aaPredicted RBP20.23■□□□□ 0.83
TGFB1-202ENST00000597453 BCORQ6W2J9 1755 aa20.22■□□□□ 0.83
TGFB1-202ENST00000597453 KIF3CO14782 793 aa20.22■□□□□ 0.83
TGFB1-202ENST00000597453 IL6STP40189 918 aaPredicted RBP20.22■□□□□ 0.83
TGFB1-202ENST00000597453 BICDL1Q6ZP65 573 aa20.22■□□□□ 0.83
TGFB1-202ENST00000597453 CEP350Q5VT06 3117 aa20.22■□□□□ 0.83
TGFB1-202ENST00000597453 DCTN1Q14203 1278 aa20.21■□□□□ 0.83
TGFB1-202ENST00000597453 TBC1D9BQ66K14 1250 aa20.21■□□□□ 0.83
TGFB1-202ENST00000597453 RTF1Q92541 710 aaKnown RBP20.21■□□□□ 0.83
TGFB1-202ENST00000597453 TBC1D2BQ9UPU7 963 aa20.21■□□□□ 0.83
TGFB1-202ENST00000597453 PRAMEF22A3QJZ6 481 aa20.2■□□□□ 0.82
TGFB1-202ENST00000597453 C9orf131Q5VYM1 1079 aa20.2■□□□□ 0.82
TGFB1-202ENST00000597453 USP16Q9Y5T5 823 aa20.2■□□□□ 0.82
TGFB1-202ENST00000597453 COL11A2P13942 1736 aaPredicted RBP20.19■□□□□ 0.82
TGFB1-202ENST00000597453 PIP4K2AP48426 406 aaPredicted RBP20.18■□□□□ 0.82
TGFB1-202ENST00000597453 CAMTA2O94983 1202 aa20.17■□□□□ 0.82
TGFB1-202ENST00000597453 C2CD5Q86YS7 1000 aa20.17■□□□□ 0.82
TGFB1-202ENST00000597453 HTATSF1O43719 755 aaKnown RBP20.16■□□□□ 0.82
TGFB1-202ENST00000597453 NMRK2Q9NPI5 230 aa20.16■□□□□ 0.82
TGFB1-202ENST00000597453 KDM3BQ7LBC6 1761 aa20.16■□□□□ 0.82
TGFB1-202ENST00000597453 RASSF7Q02833 373 aa20.15■□□□□ 0.82
TGFB1-202ENST00000597453 PRR5LQ6MZQ0 368 aa20.15■□□□□ 0.82
TGFB1-202ENST00000597453 CCDC24Q8N4L8 307 aa20.15■□□□□ 0.82
TGFB1-202ENST00000597453 RNF181Q9P0P0 153 aa20.15■□□□□ 0.82
TGFB1-202ENST00000597453 LAMB4A4D0S4 1761 aa20.15■□□□□ 0.82
TGFB1-202ENST00000597453 CCDC88AQ3V6T2 1871 aa20.14■□□□□ 0.81
TGFB1-202ENST00000597453 SNRPA1P09661 255 aaKnown RBP20.14■□□□□ 0.81
TGFB1-202ENST00000597453 HSPA6P17066 643 aa20.14■□□□□ 0.81
TGFB1-202ENST00000597453 DZIP3Q86Y13 1208 aaKnown RBP20.14■□□□□ 0.81
TGFB1-202ENST00000597453 H0YIN7 160 aa20.13■□□□□ 0.81
TGFB1-202ENST00000597453 TTLL6Q8N841 843 aa20.13■□□□□ 0.81
TGFB1-202ENST00000597453 PLEKHF1Q96S99 279 aa20.13■□□□□ 0.81
TGFB1-202ENST00000597453 MIS18AQ9NYP9 233 aa20.13■□□□□ 0.81
TGFB1-202ENST00000597453 CACNA1SQ13698 1873 aa20.13■□□□□ 0.81
TGFB1-202ENST00000597453 NBPF26B4DH59 902 aa20.12■□□□□ 0.81
TGFB1-202ENST00000597453 PRELPP51888 382 aa20.12■□□□□ 0.81
TGFB1-202ENST00000597453 TAF7Q15545 349 aaPredicted RBP20.12■□□□□ 0.81
TGFB1-202ENST00000597453 NBPF10Q6P3W6 841 aaKnown RBP20.12■□□□□ 0.81
TGFB1-202ENST00000597453 NPM2Q86SE8 214 aaKnown RBP20.12■□□□□ 0.81
TGFB1-202ENST00000597453 NBPF15Q8N660 670 aa20.12■□□□□ 0.81
TGFB1-202ENST00000597453 TIAM2Q8IVF5 1701 aa20.11■□□□□ 0.81
TGFB1-202ENST00000597453 SETDB2Q96T68 719 aa20.11■□□□□ 0.81
TGFB1-202ENST00000597453 BRIP1Q9BX63 1249 aa20.11■□□□□ 0.81
TGFB1-202ENST00000597453 TNRC6CQ9HCJ0 1690 aaKnown RBP20.1■□□□□ 0.81
TGFB1-202ENST00000597453 TOMM70O94826 608 aa20.09■□□□□ 0.81
TGFB1-202ENST00000597453 NEFMP07197 916 aa20.09■□□□□ 0.81
TGFB1-202ENST00000597453 PDE6BP35913 854 aa20.09■□□□□ 0.81
TGFB1-202ENST00000597453 CNBD1Q8NA66 436 aa20.09■□□□□ 0.81
TGFB1-202ENST00000597453 FER1L6Q2WGJ9 1857 aa20.09■□□□□ 0.81
TGFB1-202ENST00000597453 ARFGEF2Q9Y6D5 1785 aa20.08■□□□□ 0.81
TGFB1-202ENST00000597453 NFKBIEO00221 500 aa20.08■□□□□ 0.81
TGFB1-202ENST00000597453 NFE2L2Q16236 605 aa20.08■□□□□ 0.81
TGFB1-202ENST00000597453 ZNF622Q969S3 477 aaKnown RBP eCLIP20.08■□□□□ 0.81
TGFB1-202ENST00000597453 THUMPD2Q9BTF0 503 aaKnown RBP20.08■□□□□ 0.81
TGFB1-202ENST00000597453 SLX4Q8IY92 1834 aa20.08■□□□□ 0.8
TGFB1-202ENST00000597453 KDM2BQ8NHM5 1336 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms