RNA–Protein interactions for RNA: ENST00000597347.5

SOX2-OT-226, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 1,342 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-226ENST00000597347 BTBD11A6QL63 1104 aa12.89□□□□□ -0.35
SOX2-OT-226ENST00000597347 SLC39A6Q13433 755 aa12.89□□□□□ -0.35
SOX2-OT-226ENST00000597347 DNAJC10Q8IXB1 793 aa12.89□□□□□ -0.35
SOX2-OT-226ENST00000597347 ZNF496Q96IT1 587 aaPredicted RBP12.89□□□□□ -0.35
SOX2-OT-226ENST00000597347 HEG1Q9ULI3 1381 aa12.89□□□□□ -0.35
SOX2-OT-226ENST00000597347 KCPQ6ZWJ8 1503 aa12.89□□□□□ -0.35
SOX2-OT-226ENST00000597347 RFC4P35249 363 aa12.88□□□□□ -0.35
SOX2-OT-226ENST00000597347 UBR3Q6ZT12 1888 aa12.88□□□□□ -0.35
SOX2-OT-226ENST00000597347 SOS1Q07889 1333 aaPredicted RBP12.88□□□□□ -0.35
SOX2-OT-226ENST00000597347 A0A087WZG4 1122 aa12.88□□□□□ -0.35
SOX2-OT-226ENST00000597347 GYS1P13807 737 aa12.88□□□□□ -0.35
SOX2-OT-226ENST00000597347 IL6STP40189 918 aaPredicted RBP12.88□□□□□ -0.35
SOX2-OT-226ENST00000597347 EIF5P55010 431 aaKnown RBP12.88□□□□□ -0.35
SOX2-OT-226ENST00000597347 LMOD3Q0VAK6 560 aa12.88□□□□□ -0.35
SOX2-OT-226ENST00000597347 RUNDC1Q96C34 613 aa12.88□□□□□ -0.35
SOX2-OT-226ENST00000597347 COL5A3P25940 1745 aaPredicted RBP12.87□□□□□ -0.35
SOX2-OT-226ENST00000597347 SNRPA1P09661 255 aaKnown RBP12.87□□□□□ -0.35
SOX2-OT-226ENST00000597347 TM4SF1P30408 202 aa12.87□□□□□ -0.35
SOX2-OT-226ENST00000597347 TMPOP42166 694 aaKnown RBP12.87□□□□□ -0.35
SOX2-OT-226ENST00000597347 MCM10Q7L590 875 aa12.87□□□□□ -0.35
SOX2-OT-226ENST00000597347 NARFQ9UHQ1 456 aa12.87□□□□□ -0.35
SOX2-OT-226ENST00000597347 USP42Q9H9J4 1324 aaKnown RBP12.86□□□□□ -0.35
SOX2-OT-226ENST00000597347 MAPK8IP3Q9UPT6 1336 aa12.86□□□□□ -0.35
SOX2-OT-226ENST00000597347 TGFB2P61812 414 aa12.86□□□□□ -0.35
SOX2-OT-226ENST00000597347 ADAMTS8Q9UP79 889 aa12.86□□□□□ -0.35
SOX2-OT-226ENST00000597347 TUBGCP6Q96RT7 1819 aa12.85□□□□□ -0.35
SOX2-OT-226ENST00000597347 UBR2Q8IWV8 1755 aa12.85□□□□□ -0.35
SOX2-OT-226ENST00000597347 PHF14O94880 888 aa12.85□□□□□ -0.35
SOX2-OT-226ENST00000597347 SIPA1L3O60292 1781 aaPredicted RBP12.84□□□□□ -0.35
SOX2-OT-226ENST00000597347 RIPK4P57078 832 aa12.84□□□□□ -0.35
SOX2-OT-226ENST00000597347 WDR43Q15061 677 aaKnown RBP eCLIP12.84□□□□□ -0.35
SOX2-OT-226ENST00000597347 MYH14Q7Z406 1995 aaKnown RBP12.83□□□□□ -0.36
SOX2-OT-226ENST00000597347 GRIN3BO60391 1043 aa12.83□□□□□ -0.36
SOX2-OT-226ENST00000597347 ZPR1O75312 459 aa12.83□□□□□ -0.36
SOX2-OT-226ENST00000597347 MMP10P09238 476 aa12.83□□□□□ -0.36
SOX2-OT-226ENST00000597347 DCTN1Q14203 1278 aa12.83□□□□□ -0.36
SOX2-OT-226ENST00000597347 POTEHQ6S545 545 aa12.83□□□□□ -0.36
SOX2-OT-226ENST00000597347 CLEC4GQ6UXB4 293 aa12.83□□□□□ -0.36
SOX2-OT-226ENST00000597347 ZBTB1Q9Y2K1 713 aa12.83□□□□□ -0.36
SOX2-OT-226ENST00000597347 USP16Q9Y5T5 823 aa12.83□□□□□ -0.36
SOX2-OT-226ENST00000597347 TJP1Q07157 1748 aa12.82□□□□□ -0.36
SOX2-OT-226ENST00000597347 CHL1O00533 1208 aa12.82□□□□□ -0.36
SOX2-OT-226ENST00000597347 KCNQ3O43525 872 aa12.82□□□□□ -0.36
SOX2-OT-226ENST00000597347 GIGYF1O75420 1035 aaPredicted RBP12.82□□□□□ -0.36
SOX2-OT-226ENST00000597347 EIF4A1P60842 406 aaKnown RBP12.82□□□□□ -0.36
SOX2-OT-226ENST00000597347 SMIM5Q71RC9 77 aa12.82□□□□□ -0.36
SOX2-OT-226ENST00000597347 MSL1Q68DK7 614 aa12.81□□□□□ -0.36
SOX2-OT-226ENST00000597347 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
SOX2-OT-226ENST00000597347 PARP3Q9Y6F1 533 aa12.81□□□□□ -0.36
SOX2-OT-226ENST00000597347 ERBB4Q15303 1308 aa12.81□□□□□ -0.36
SOX2-OT-226ENST00000597347 FKBP8Q14318 412 aa12.8□□□□□ -0.36
SOX2-OT-226ENST00000597347 BCL2L12Q9HB09 334 aa12.8□□□□□ -0.36
SOX2-OT-226ENST00000597347 PDZRN3Q9UPQ7 1066 aa12.8□□□□□ -0.36
SOX2-OT-226ENST00000597347 COL15A1P39059 1388 aa12.8□□□□□ -0.36
SOX2-OT-226ENST00000597347 POLRMTO00411 1230 aaKnown RBP12.79□□□□□ -0.36
SOX2-OT-226ENST00000597347 ANP32CO43423 234 aa12.79□□□□□ -0.36
SOX2-OT-226ENST00000597347 A1BGP04217 495 aa12.79□□□□□ -0.36
SOX2-OT-226ENST00000597347 CALD1Q05682 793 aaKnown RBP12.79□□□□□ -0.36
SOX2-OT-226ENST00000597347 CCDC27Q2M243 656 aa12.79□□□□□ -0.36
SOX2-OT-226ENST00000597347 USPL1Q5W0Q7 1092 aa12.79□□□□□ -0.36
SOX2-OT-226ENST00000597347 NGEFQ8N5V2 710 aa12.79□□□□□ -0.36
SOX2-OT-226ENST00000597347 VIRMAQ69YN4 1812 aaKnown RBP12.78□□□□□ -0.36
SOX2-OT-226ENST00000597347 HOXB7P09629 217 aa12.78□□□□□ -0.36
SOX2-OT-226ENST00000597347 ZNF853P0CG23 659 aa12.78□□□□□ -0.36
SOX2-OT-226ENST00000597347 CANXP27824 592 aaKnown RBP12.78□□□□□ -0.36
SOX2-OT-226ENST00000597347 NLGN2Q8NFZ4 835 aa12.78□□□□□ -0.36
SOX2-OT-226ENST00000597347 CFAP44Q96MT7 982 aa12.78□□□□□ -0.36
SOX2-OT-226ENST00000597347 ERVV-1B6SEH8 477 aa12.77□□□□□ -0.37
SOX2-OT-226ENST00000597347 NFIXQ14938 502 aa12.77□□□□□ -0.37
SOX2-OT-226ENST00000597347 NPM2Q86SE8 214 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-226ENST00000597347 CHMP4AQ9BY43 222 aa12.77□□□□□ -0.37
SOX2-OT-226ENST00000597347 SRP68Q9UHB9 627 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-226ENST00000597347 NBPF26B4DH59 902 aa12.76□□□□□ -0.37
SOX2-OT-226ENST00000597347 CAMTA2O94983 1202 aa12.76□□□□□ -0.37
SOX2-OT-226ENST00000597347 DDR1Q08345 913 aa12.76□□□□□ -0.37
SOX2-OT-226ENST00000597347 GPR162Q16538 588 aa12.76□□□□□ -0.37
SOX2-OT-226ENST00000597347 NBPF10Q6P3W6 841 aaKnown RBP12.76□□□□□ -0.37
SOX2-OT-226ENST00000597347 C10orf71Q711Q0 1435 aa12.76□□□□□ -0.37
SOX2-OT-226ENST00000597347 NBPF15Q8N660 670 aa12.76□□□□□ -0.37
SOX2-OT-226ENST00000597347 MIS18AQ9NYP9 233 aa12.76□□□□□ -0.37
SOX2-OT-226ENST00000597347 KCNA3P22001 575 aa12.75□□□□□ -0.37
SOX2-OT-226ENST00000597347 TSPYL4Q9UJ04 414 aa12.75□□□□□ -0.37
SOX2-OT-226ENST00000597347 PRAMEF22A3QJZ6 481 aa12.74□□□□□ -0.37
SOX2-OT-226ENST00000597347 APAF1O14727 1248 aa12.74□□□□□ -0.37
SOX2-OT-226ENST00000597347 SERPINB2P05120 415 aa12.74□□□□□ -0.37
SOX2-OT-226ENST00000597347 DZIP3Q86Y13 1208 aaKnown RBP12.74□□□□□ -0.37
SOX2-OT-226ENST00000597347 THUMPD2Q9BTF0 503 aaKnown RBP12.74□□□□□ -0.37
SOX2-OT-226ENST00000597347 ZNF652Q9Y2D9 606 aa12.74□□□□□ -0.37
SOX2-OT-226ENST00000597347 KIF13BQ9NQT8 1826 aa12.73□□□□□ -0.37
SOX2-OT-226ENST00000597347 LRP10Q7Z4F1 713 aa12.73□□□□□ -0.37
SOX2-OT-226ENST00000597347 CCDC146Q8IYE0 955 aa12.73□□□□□ -0.37
SOX2-OT-226ENST00000597347 BRIP1Q9BX63 1249 aa12.73□□□□□ -0.37
SOX2-OT-226ENST00000597347 IFT57Q9NWB7 429 aa12.73□□□□□ -0.37
SOX2-OT-226ENST00000597347 TBC1D2BQ9UPU7 963 aa12.73□□□□□ -0.37
SOX2-OT-226ENST00000597347 C4AP0C0L4 1744 aa12.72□□□□□ -0.37
SOX2-OT-226ENST00000597347 IL16Q14005 1332 aa12.72□□□□□ -0.37
SOX2-OT-226ENST00000597347 DLG5Q8TDM6 1919 aa12.72□□□□□ -0.37
SOX2-OT-226ENST00000597347 KLRG2A4D1S0 409 aaPredicted RBP12.72□□□□□ -0.37
SOX2-OT-226ENST00000597347 YBX3P16989 372 aaKnown RBP eCLIP12.72□□□□□ -0.37
SOX2-OT-226ENST00000597347 GNAI1P63096 354 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms