RNA–Protein interactions for RNA: ENST00000594943.1

ZNF549-203, Transcript of zinc finger protein 549, humanhuman

TSL 4 BASIC

Gene ZNF549, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-203ENST00000594943 MCM10Q7L590 875 aa23.92■■□□□ 1.42
ZNF549-203ENST00000594943 TEX13AQ9BXU3 409 aaPredicted RBP23.92■■□□□ 1.42
ZNF549-203ENST00000594943 FKBP8Q14318 412 aa23.91■■□□□ 1.42
ZNF549-203ENST00000594943 PXDNLA1KZ92 1463 aa23.89■■□□□ 1.42
ZNF549-203ENST00000594943 CANXP27824 592 aaKnown RBP23.89■■□□□ 1.41
ZNF549-203ENST00000594943 USPL1Q5W0Q7 1092 aa23.89■■□□□ 1.41
ZNF549-203ENST00000594943 PNNQ9H307 717 aaKnown RBP23.89■■□□□ 1.41
ZNF549-203ENST00000594943 ZNF784Q8NCA9 323 aaPredicted RBP23.88■■□□□ 1.41
ZNF549-203ENST00000594943 NARFQ9UHQ1 456 aa23.88■■□□□ 1.41
ZNF549-203ENST00000594943 MAPK8IP3Q9UPT6 1336 aa23.87■■□□□ 1.41
ZNF549-203ENST00000594943 GOLGB1Q14789 3259 aaKnown RBP23.87■■□□□ 1.41
ZNF549-203ENST00000594943 TGFB2P61812 414 aa23.87■■□□□ 1.41
ZNF549-203ENST00000594943 DCTN1Q14203 1278 aa23.87■■□□□ 1.41
ZNF549-203ENST00000594943 KIAA1551Q9HCM1 1747 aa23.87■■□□□ 1.41
ZNF549-203ENST00000594943 MYBBP1AQ9BQG0 1328 aaKnown RBP23.86■■□□□ 1.41
ZNF549-203ENST00000594943 KCNQ3O43525 872 aa23.86■■□□□ 1.41
ZNF549-203ENST00000594943 DDR1Q08345 913 aa23.86■■□□□ 1.41
ZNF549-203ENST00000594943 PLEKHF1Q96S99 279 aa23.86■■□□□ 1.41
ZNF549-203ENST00000594943 WWC3Q9ULE0 1092 aa23.86■■□□□ 1.41
ZNF549-203ENST00000594943 A0A087WZG4 1122 aa23.85■■□□□ 1.41
ZNF549-203ENST00000594943 EIF5P55010 431 aaKnown RBP23.84■■□□□ 1.41
ZNF549-203ENST00000594943 DLG5Q8TDM6 1919 aa23.84■■□□□ 1.41
ZNF549-203ENST00000594943 N4BP2Q86UW6 1770 aaPredicted RBP23.83■■□□□ 1.41
ZNF549-203ENST00000594943 POLRMTO00411 1230 aaKnown RBP23.83■■□□□ 1.41
ZNF549-203ENST00000594943 NFE2L2Q16236 605 aa23.83■■□□□ 1.41
ZNF549-203ENST00000594943 TM4SF1P30408 202 aa23.82■■□□□ 1.4
ZNF549-203ENST00000594943 IL6STP40189 918 aaPredicted RBP23.82■■□□□ 1.4
ZNF549-203ENST00000594943 TAF7Q15545 349 aaPredicted RBP23.82■■□□□ 1.4
ZNF549-203ENST00000594943 NPM2Q86SE8 214 aaKnown RBP23.82■■□□□ 1.4
ZNF549-203ENST00000594943 ZNF330Q9Y3S2 320 aaPredicted RBP23.82■■□□□ 1.4
ZNF549-203ENST00000594943 SCN7AQ01118 1682 aa23.81■■□□□ 1.4
ZNF549-203ENST00000594943 A0A0G2JLW4 131 aa23.81■■□□□ 1.4
ZNF549-203ENST00000594943 SNRPA1P09661 255 aaKnown RBP23.8■■□□□ 1.4
ZNF549-203ENST00000594943 DPEP1P16444 411 aa23.8■■□□□ 1.4
ZNF549-203ENST00000594943 ZEB1P37275 1124 aaPredicted RBP23.8■■□□□ 1.4
ZNF549-203ENST00000594943 NFIXQ14938 502 aa23.8■■□□□ 1.4
ZNF549-203ENST00000594943 BCL2L12Q9HB09 334 aa23.8■■□□□ 1.4
ZNF549-203ENST00000594943 A1BGP04217 495 aa23.79■■□□□ 1.4
ZNF549-203ENST00000594943 PNISRQ8TF01 805 aaKnown RBP23.79■■□□□ 1.4
ZNF549-203ENST00000594943 BCS1LQ9Y276 419 aa23.78■■□□□ 1.4
ZNF549-203ENST00000594943 USP16Q9Y5T5 823 aa23.77■■□□□ 1.4
ZNF549-203ENST00000594943 BRCA1P38398 1863 aaKnown RBP23.77■■□□□ 1.4
ZNF549-203ENST00000594943 NRXN2Q9P2S2 1712 aa23.76■■□□□ 1.39
ZNF549-203ENST00000594943 KDM3BQ7LBC6 1761 aa23.76■■□□□ 1.39
ZNF549-203ENST00000594943 PRAMEF22A3QJZ6 481 aa23.76■■□□□ 1.39
ZNF549-203ENST00000594943 TBC1D2BQ9UPU7 963 aa23.76■■□□□ 1.39
ZNF549-203ENST00000594943 AFDNP55196 1824 aaKnown RBP23.75■■□□□ 1.39
ZNF549-203ENST00000594943 THUMPD2Q9BTF0 503 aaKnown RBP23.75■■□□□ 1.39
ZNF549-203ENST00000594943 MIS18AQ9NYP9 233 aa23.75■■□□□ 1.39
ZNF549-203ENST00000594943 LAMB4A4D0S4 1761 aa23.74■■□□□ 1.39
ZNF549-203ENST00000594943 SERPINB2P05120 415 aa23.74■■□□□ 1.39
ZNF549-203ENST00000594943 BICDL1Q6ZP65 573 aa23.74■■□□□ 1.39
ZNF549-203ENST00000594943 PIM2Q9P1W9 311 aa23.74■■□□□ 1.39
ZNF549-203ENST00000594943 WDR43Q15061 677 aaKnown RBP eCLIP23.73■■□□□ 1.39
ZNF549-203ENST00000594943 PRKRIP1Q9H875 184 aaPredicted RBP23.73■■□□□ 1.39
ZNF549-203ENST00000594943 KCNA3P22001 575 aa23.72■■□□□ 1.39
ZNF549-203ENST00000594943 PIP4K2AP48426 406 aaPredicted RBP23.72■■□□□ 1.39
ZNF549-203ENST00000594943 LMOD3Q0VAK6 560 aa23.72■■□□□ 1.39
ZNF549-203ENST00000594943 DZIP3Q86Y13 1208 aaKnown RBP23.72■■□□□ 1.39
ZNF549-203ENST00000594943 ATP10DQ9P241 1426 aa23.72■■□□□ 1.39
ZNF549-203ENST00000594943 BCORQ6W2J9 1755 aa23.72■■□□□ 1.39
ZNF549-203ENST00000594943 ADCY9O60503 1353 aa23.71■■□□□ 1.39
ZNF549-203ENST00000594943 CARMIL3Q8ND23 1372 aa23.71■■□□□ 1.39
ZNF549-203ENST00000594943 CAMTA2O94983 1202 aa23.71■■□□□ 1.39
ZNF549-203ENST00000594943 RIPK4P57078 832 aa23.71■■□□□ 1.39
ZNF549-203ENST00000594943 DALRD3Q5D0E6 543 aaKnown RBP23.71■■□□□ 1.39
ZNF549-203ENST00000594943 TBC1D9BQ66K14 1250 aa23.71■■□□□ 1.39
ZNF549-203ENST00000594943 CHRNA5P30532 468 aa23.7■■□□□ 1.38
ZNF549-203ENST00000594943 ARFGEF1Q9Y6D6 1849 aa23.7■■□□□ 1.38
ZNF549-203ENST00000594943 TMPOP42166 694 aaKnown RBP23.69■■□□□ 1.38
ZNF549-203ENST00000594943 EIF4A1P60842 406 aaKnown RBP23.68■■□□□ 1.38
ZNF549-203ENST00000594943 NBPF26B4DH59 902 aa23.67■■□□□ 1.38
ZNF549-203ENST00000594943 GIGYF1O75420 1035 aaPredicted RBP23.67■■□□□ 1.38
ZNF549-203ENST00000594943 NBPF10Q6P3W6 841 aaKnown RBP23.67■■□□□ 1.38
ZNF549-203ENST00000594943 ARHGAP27Q6ZUM4 889 aa23.67■■□□□ 1.38
ZNF549-203ENST00000594943 CCDC146Q8IYE0 955 aa23.67■■□□□ 1.38
ZNF549-203ENST00000594943 NBPF15Q8N660 670 aa23.67■■□□□ 1.38
ZNF549-203ENST00000594943 SETDB2Q96T68 719 aa23.67■■□□□ 1.38
ZNF549-203ENST00000594943 ZNF652Q9Y2D9 606 aa23.67■■□□□ 1.38
ZNF549-203ENST00000594943 DLEC1Q9Y238 1755 aa23.66■■□□□ 1.38
ZNF549-203ENST00000594943 RUNDC1Q96C34 613 aa23.66■■□□□ 1.38
ZNF549-203ENST00000594943 TSPYL4Q9UJ04 414 aa23.66■■□□□ 1.38
ZNF549-203ENST00000594943 CLEC4GQ6UXB4 293 aa23.65■■□□□ 1.38
ZNF549-203ENST00000594943 RGL2O15211 777 aa23.64■■□□□ 1.37
ZNF549-203ENST00000594943 NPHP1O15259 732 aa23.64■■□□□ 1.37
ZNF549-203ENST00000594943 CNBD1Q8NA66 436 aa23.64■■□□□ 1.37
ZNF549-203ENST00000594943 RRP7AQ9Y3A4 280 aaKnown RBP23.64■■□□□ 1.37
ZNF549-203ENST00000594943 NEUROD2Q15784 382 aa23.63■■□□□ 1.37
ZNF549-203ENST00000594943 PRR5LQ6MZQ0 368 aa23.63■■□□□ 1.37
ZNF549-203ENST00000594943 C2CD5Q86YS7 1000 aa23.63■■□□□ 1.37
ZNF549-203ENST00000594943 BABAM1Q9NWV8 329 aa23.63■■□□□ 1.37
ZNF549-203ENST00000594943 ADAMTS8Q9UP79 889 aa23.63■■□□□ 1.37
ZNF549-203ENST00000594943 H0YIN7 160 aa23.62■■□□□ 1.37
ZNF549-203ENST00000594943 BRIP1Q9BX63 1249 aa23.62■■□□□ 1.37
ZNF549-203ENST00000594943 GPBP1L1Q9HC44 474 aaPredicted RBP23.62■■□□□ 1.37
ZNF549-203ENST00000594943 PDZRN3Q9UPQ7 1066 aa23.62■■□□□ 1.37
ZNF549-203ENST00000594943 PDE6BP35913 854 aa23.61■■□□□ 1.37
ZNF549-203ENST00000594943 ST5P78524 1137 aa23.61■■□□□ 1.37
ZNF549-203ENST00000594943 ANKRD31Q8N7Z5 1873 aa23.61■■□□□ 1.37
ZNF549-203ENST00000594943 TTLL6Q8N841 843 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms