RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 ADAMTS7Q9UKP4 1686 aa21.5■■□□□ 1.03
CIRBP-240ENST00000592815 C4AP0C0L4 1744 aa21.49■■□□□ 1.03
CIRBP-240ENST00000592815 POLRMTO00411 1230 aaKnown RBP21.49■■□□□ 1.03
CIRBP-240ENST00000592815 FCHSD2O94868 740 aa21.49■■□□□ 1.03
CIRBP-240ENST00000592815 KCNA3P22001 575 aa21.48■■□□□ 1.03
CIRBP-240ENST00000592815 ARHGAP27Q6ZUM4 889 aa21.48■■□□□ 1.03
CIRBP-240ENST00000592815 ZNF526Q8TF50 670 aaPredicted RBP21.48■■□□□ 1.03
CIRBP-240ENST00000592815 COL15A1P39059 1388 aa21.48■■□□□ 1.03
CIRBP-240ENST00000592815 BTBD11A6QL63 1104 aa21.47■■□□□ 1.03
CIRBP-240ENST00000592815 TEX13AQ9BXU3 409 aaPredicted RBP21.47■■□□□ 1.03
CIRBP-240ENST00000592815 GPBP1L1Q9HC44 474 aaPredicted RBP21.47■■□□□ 1.03
CIRBP-240ENST00000592815 PIM2Q9P1W9 311 aa21.47■■□□□ 1.03
CIRBP-240ENST00000592815 KCNQ3O43525 872 aa21.46■■□□□ 1.03
CIRBP-240ENST00000592815 NFIXQ14938 502 aa21.46■■□□□ 1.03
CIRBP-240ENST00000592815 RTF1Q92541 710 aaKnown RBP21.46■■□□□ 1.03
CIRBP-240ENST00000592815 FMNL2Q96PY5 1086 aa21.46■■□□□ 1.03
CIRBP-240ENST00000592815 BCL2L12Q9HB09 334 aa21.46■■□□□ 1.03
CIRBP-240ENST00000592815 CEMIPQ8WUJ3 1361 aa21.46■■□□□ 1.03
CIRBP-240ENST00000592815 HEG1Q9ULI3 1381 aa21.46■■□□□ 1.03
CIRBP-240ENST00000592815 SENP3-EIF4A1A0A087X0R7 540 aa21.45■■□□□ 1.02
CIRBP-240ENST00000592815 EIF5P55010 431 aaKnown RBP21.45■■□□□ 1.02
CIRBP-240ENST00000592815 KIF13BQ9NQT8 1826 aa21.45■■□□□ 1.02
CIRBP-240ENST00000592815 ADCY9O60503 1353 aa21.45■■□□□ 1.02
CIRBP-240ENST00000592815 N4BP2Q86UW6 1770 aaPredicted RBP21.44■■□□□ 1.02
CIRBP-240ENST00000592815 A0A087WZG4 1122 aa21.44■■□□□ 1.02
CIRBP-240ENST00000592815 CHRNA5P30532 468 aa21.44■■□□□ 1.02
CIRBP-240ENST00000592815 MCM10Q7L590 875 aa21.44■■□□□ 1.02
CIRBP-240ENST00000592815 VIRMAQ69YN4 1812 aaKnown RBP21.43■■□□□ 1.02
CIRBP-240ENST00000592815 DALRD3Q5D0E6 543 aaKnown RBP21.43■■□□□ 1.02
CIRBP-240ENST00000592815 ZNF330Q9Y3S2 320 aaPredicted RBP21.43■■□□□ 1.02
CIRBP-240ENST00000592815 A1BGP04217 495 aa21.42■■□□□ 1.02
CIRBP-240ENST00000592815 SERPINB2P05120 415 aa21.42■■□□□ 1.02
CIRBP-240ENST00000592815 BICDL1Q6ZP65 573 aa21.42■■□□□ 1.02
CIRBP-240ENST00000592815 KIAA1551Q9HCM1 1747 aa21.41■■□□□ 1.02
CIRBP-240ENST00000592815 DCTN1Q14203 1278 aa21.41■■□□□ 1.02
CIRBP-240ENST00000592815 TBC1D2BQ9UPU7 963 aa21.41■■□□□ 1.02
CIRBP-240ENST00000592815 IL6STP40189 918 aaPredicted RBP21.4■■□□□ 1.02
CIRBP-240ENST00000592815 UBR2Q8IWV8 1755 aa21.4■■□□□ 1.02
CIRBP-240ENST00000592815 HTATSF1O43719 755 aaKnown RBP21.39■■□□□ 1.01
CIRBP-240ENST00000592815 NPM2Q86SE8 214 aaKnown RBP21.39■■□□□ 1.01
CIRBP-240ENST00000592815 USP16Q9Y5T5 823 aa21.39■■□□□ 1.01
CIRBP-240ENST00000592815 NEFMP07197 916 aa21.38■■□□□ 1.01
CIRBP-240ENST00000592815 TBC1D9BQ66K14 1250 aa21.37■■□□□ 1.01
CIRBP-240ENST00000592815 PRAMEF22A3QJZ6 481 aa21.36■■□□□ 1.01
CIRBP-240ENST00000592815 SNRPA1P09661 255 aaKnown RBP21.36■■□□□ 1.01
CIRBP-240ENST00000592815 TAF7Q15545 349 aaPredicted RBP21.36■■□□□ 1.01
CIRBP-240ENST00000592815 PIP4K2AP48426 406 aaPredicted RBP21.35■■□□□ 1.01
CIRBP-240ENST00000592815 C9orf131Q5VYM1 1079 aa21.35■■□□□ 1.01
CIRBP-240ENST00000592815 MIS18AQ9NYP9 233 aa21.35■■□□□ 1.01
CIRBP-240ENST00000592815 SIPA1L3O60292 1781 aaPredicted RBP21.35■■□□□ 1.01
CIRBP-240ENST00000592815 C2CD5Q86YS7 1000 aa21.34■■□□□ 1.01
CIRBP-240ENST00000592815 PLEKHF1Q96S99 279 aa21.33■■□□□ 1.01
CIRBP-240ENST00000592815 H0YIN7 160 aa21.32■■□□□ 1
CIRBP-240ENST00000592815 CAMTA2O94983 1202 aa21.32■■□□□ 1
CIRBP-240ENST00000592815 DZIP3Q86Y13 1208 aaKnown RBP21.32■■□□□ 1
CIRBP-240ENST00000592815 KIF3CO14782 793 aa21.31■■□□□ 1
CIRBP-240ENST00000592815 CCDC24Q8N4L8 307 aa21.31■■□□□ 1
CIRBP-240ENST00000592815 TTLL6Q8N841 843 aa21.31■■□□□ 1
CIRBP-240ENST00000592815 SETDB2Q96T68 719 aa21.31■■□□□ 1
CIRBP-240ENST00000592815 NFE2L2Q16236 605 aa21.3■■□□□ 1
CIRBP-240ENST00000592815 PNNQ9H307 717 aaKnown RBP21.3■■□□□ 1
CIRBP-240ENST00000592815 RNF181Q9P0P0 153 aa21.3■■□□□ 1
CIRBP-240ENST00000592815 CARMIL3Q8ND23 1372 aa21.3■■□□□ 1
CIRBP-240ENST00000592815 BRCA1P38398 1863 aaKnown RBP21.3■■□□□ 1
CIRBP-240ENST00000592815 DDX10Q13206 875 aaKnown RBP21.29■■□□□ 1
CIRBP-240ENST00000592815 RALBP1Q15311 655 aa21.29■■□□□ 1
CIRBP-240ENST00000592815 PRR5LQ6MZQ0 368 aa21.29■■□□□ 1
CIRBP-240ENST00000592815 BRIP1Q9BX63 1249 aa21.29■■□□□ 1
CIRBP-240ENST00000592815 AFDNP55196 1824 aaKnown RBP21.28■■□□□ 1
CIRBP-240ENST00000592815 NBPF26B4DH59 902 aa21.28■■□□□ 1
CIRBP-240ENST00000592815 NPHP1O15259 732 aa21.28■■□□□ 1
CIRBP-240ENST00000592815 PDE6BP35913 854 aa21.28■■□□□ 1
CIRBP-240ENST00000592815 NBPF10Q6P3W6 841 aaKnown RBP21.28■■□□□ 1
CIRBP-240ENST00000592815 NBPF15Q8N660 670 aa21.28■■□□□ 1
CIRBP-240ENST00000592815 PNISRQ8TF01 805 aaKnown RBP21.28■■□□□ 1
CIRBP-240ENST00000592815 ZNF622Q969S3 477 aaKnown RBP eCLIP21.27■■□□□ 1
CIRBP-240ENST00000592815 THUMPD2Q9BTF0 503 aaKnown RBP21.27■■□□□ 1
CIRBP-240ENST00000592815 MAPK8IP3Q9UPT6 1336 aa21.27■□□□□ 0.99
CIRBP-240ENST00000592815 NRXN2Q9P2S2 1712 aa21.26■□□□□ 0.99
CIRBP-240ENST00000592815 CNBD1Q8NA66 436 aa21.26■□□□□ 0.99
CIRBP-240ENST00000592815 NMRK2Q9NPI5 230 aa21.26■□□□□ 0.99
CIRBP-240ENST00000592815 ARFGEF1Q9Y6D6 1849 aa21.26■□□□□ 0.99
CIRBP-240ENST00000592815 RASSF7Q02833 373 aa21.25■□□□□ 0.99
CIRBP-240ENST00000592815 CLEC4GQ6UXB4 293 aa21.25■□□□□ 0.99
CIRBP-240ENST00000592815 PDZRN3Q9UPQ7 1066 aa21.25■□□□□ 0.99
CIRBP-240ENST00000592815 ZNF652Q9Y2D9 606 aa21.24■□□□□ 0.99
CIRBP-240ENST00000592815 HSPA6P17066 643 aa21.23■□□□□ 0.99
CIRBP-240ENST00000592815 ST5P78524 1137 aa21.23■□□□□ 0.99
CIRBP-240ENST00000592815 NBPF5PQ86XG9 351 aaPredicted RBP21.23■□□□□ 0.99
CIRBP-240ENST00000592815 ZNF219Q9P2Y4 722 aaPredicted RBP21.23■□□□□ 0.99
CIRBP-240ENST00000592815 TOMM70O94826 608 aa21.22■□□□□ 0.99
CIRBP-240ENST00000592815 LMNB1P20700 586 aa21.22■□□□□ 0.99
CIRBP-240ENST00000592815 EIF4A1P60842 406 aaKnown RBP21.22■□□□□ 0.99
CIRBP-240ENST00000592815 NGEFQ8N5V2 710 aa21.22■□□□□ 0.99
CIRBP-240ENST00000592815 KDM2BQ8NHM5 1336 aa21.21■□□□□ 0.99
CIRBP-240ENST00000592815 SCN7AQ01118 1682 aa21.21■□□□□ 0.99
CIRBP-240ENST00000592815 C21orf2O43822 256 aa21.2■□□□□ 0.98
CIRBP-240ENST00000592815 PRELPP51888 382 aa21.2■□□□□ 0.98
CIRBP-240ENST00000592815 RIPK4P57078 832 aa21.2■□□□□ 0.98
CIRBP-240ENST00000592815 HLFQ16534 295 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms