RNA–Protein interactions for RNA: ENST00000592266.1

RANBP3-227, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 589 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-227ENST00000592266 NARFQ9UHQ1 456 aa23.05■■□□□ 1.28
RANBP3-227ENST00000592266 KIAA1551Q9HCM1 1747 aa23.05■■□□□ 1.28
RANBP3-227ENST00000592266 UBR2Q8IWV8 1755 aa23.04■■□□□ 1.28
RANBP3-227ENST00000592266 SENP3-EIF4A1A0A087X0R7 540 aa23.04■■□□□ 1.28
RANBP3-227ENST00000592266 U2AF1L5P0DN76 240 aaPredicted RBP23.04■■□□□ 1.28
RANBP3-227ENST00000592266 U2AF1Q01081 240 aaKnown RBP eCLIP23.04■■□□□ 1.28
RANBP3-227ENST00000592266 DDR1Q08345 913 aa23.04■■□□□ 1.28
RANBP3-227ENST00000592266 POLRMTO00411 1230 aaKnown RBP23.03■■□□□ 1.28
RANBP3-227ENST00000592266 FCHSD2O94868 740 aa23.03■■□□□ 1.28
RANBP3-227ENST00000592266 TM4SF1P30408 202 aa23.03■■□□□ 1.28
RANBP3-227ENST00000592266 N4BP2Q86UW6 1770 aaPredicted RBP23.03■■□□□ 1.28
RANBP3-227ENST00000592266 CEMIPQ8WUJ3 1361 aa23.02■■□□□ 1.28
RANBP3-227ENST00000592266 HEG1Q9ULI3 1381 aa23.02■■□□□ 1.28
RANBP3-227ENST00000592266 ZNF496Q96IT1 587 aaPredicted RBP23.02■■□□□ 1.28
RANBP3-227ENST00000592266 PHACTR3Q96KR7 559 aa23.02■■□□□ 1.28
RANBP3-227ENST00000592266 PIM2Q9P1W9 311 aa23.02■■□□□ 1.28
RANBP3-227ENST00000592266 A0A087WZG4 1122 aa23.01■■□□□ 1.27
RANBP3-227ENST00000592266 CANXP27824 592 aaKnown RBP23.01■■□□□ 1.27
RANBP3-227ENST00000592266 RTF1Q92541 710 aaKnown RBP23.01■■□□□ 1.27
RANBP3-227ENST00000592266 FMNL2Q96PY5 1086 aa23.01■■□□□ 1.27
RANBP3-227ENST00000592266 BTBD11A6QL63 1104 aa22.99■■□□□ 1.27
RANBP3-227ENST00000592266 ARHGAP27Q6ZUM4 889 aa22.99■■□□□ 1.27
RANBP3-227ENST00000592266 KCNA3P22001 575 aa22.98■■□□□ 1.27
RANBP3-227ENST00000592266 EIF5P55010 431 aaKnown RBP22.98■■□□□ 1.27
RANBP3-227ENST00000592266 NFIXQ14938 502 aa22.98■■□□□ 1.27
RANBP3-227ENST00000592266 DALRD3Q5D0E6 543 aaKnown RBP22.98■■□□□ 1.27
RANBP3-227ENST00000592266 NPM2Q86SE8 214 aaKnown RBP22.98■■□□□ 1.27
RANBP3-227ENST00000592266 ZNF526Q8TF50 670 aaPredicted RBP22.98■■□□□ 1.27
RANBP3-227ENST00000592266 SIPA1L3O60292 1781 aaPredicted RBP22.98■■□□□ 1.27
RANBP3-227ENST00000592266 NEFMP07197 916 aa22.96■■□□□ 1.27
RANBP3-227ENST00000592266 BRCA1P38398 1863 aaKnown RBP22.96■■□□□ 1.27
RANBP3-227ENST00000592266 HTATSF1O43719 755 aaKnown RBP22.95■■□□□ 1.26
RANBP3-227ENST00000592266 IL6STP40189 918 aaPredicted RBP22.95■■□□□ 1.26
RANBP3-227ENST00000592266 BCL2L12Q9HB09 334 aa22.95■■□□□ 1.26
RANBP3-227ENST00000592266 SERPINB2P05120 415 aa22.94■■□□□ 1.26
RANBP3-227ENST00000592266 ZNF330Q9Y3S2 320 aaPredicted RBP22.94■■□□□ 1.26
RANBP3-227ENST00000592266 CHRNA5P30532 468 aa22.93■■□□□ 1.26
RANBP3-227ENST00000592266 ARFGEF1Q9Y6D6 1849 aa22.92■■□□□ 1.26
RANBP3-227ENST00000592266 MCM10Q7L590 875 aa22.91■■□□□ 1.26
RANBP3-227ENST00000592266 NRXN2Q9P2S2 1712 aa22.91■■□□□ 1.26
RANBP3-227ENST00000592266 KCNQ3O43525 872 aa22.89■■□□□ 1.25
RANBP3-227ENST00000592266 BICDL1Q6ZP65 573 aa22.89■■□□□ 1.25
RANBP3-227ENST00000592266 TBC1D2BQ9UPU7 963 aa22.89■■□□□ 1.25
RANBP3-227ENST00000592266 AFDNP55196 1824 aaKnown RBP22.88■■□□□ 1.25
RANBP3-227ENST00000592266 A1BGP04217 495 aa22.88■■□□□ 1.25
RANBP3-227ENST00000592266 SNRPA1P09661 255 aaKnown RBP22.88■■□□□ 1.25
RANBP3-227ENST00000592266 C9orf131Q5VYM1 1079 aa22.88■■□□□ 1.25
RANBP3-227ENST00000592266 PNNQ9H307 717 aaKnown RBP22.88■■□□□ 1.25
RANBP3-227ENST00000592266 PDZRN3Q9UPQ7 1066 aa22.88■■□□□ 1.25
RANBP3-227ENST00000592266 CARMIL3Q8ND23 1372 aa22.88■■□□□ 1.25
RANBP3-227ENST00000592266 SCN7AQ01118 1682 aa22.87■■□□□ 1.25
RANBP3-227ENST00000592266 TBC1D9BQ66K14 1250 aa22.87■■□□□ 1.25
RANBP3-227ENST00000592266 H0YIN7 160 aa22.86■■□□□ 1.25
RANBP3-227ENST00000592266 DCTN1Q14203 1278 aa22.86■■□□□ 1.25
RANBP3-227ENST00000592266 TAF7Q15545 349 aaPredicted RBP22.86■■□□□ 1.25
RANBP3-227ENST00000592266 USP16Q9Y5T5 823 aa22.86■■□□□ 1.25
RANBP3-227ENST00000592266 KIF3CO14782 793 aa22.85■■□□□ 1.25
RANBP3-227ENST00000592266 DZIP3Q86Y13 1208 aaKnown RBP22.85■■□□□ 1.25
RANBP3-227ENST00000592266 C2CD5Q86YS7 1000 aa22.85■■□□□ 1.25
RANBP3-227ENST00000592266 TTLL6Q8N841 843 aa22.85■■□□□ 1.25
RANBP3-227ENST00000592266 NPHP1O15259 732 aa22.84■■□□□ 1.25
RANBP3-227ENST00000592266 CAMTA2O94983 1202 aa22.84■■□□□ 1.25
RANBP3-227ENST00000592266 PNISRQ8TF01 805 aaKnown RBP22.84■■□□□ 1.25
RANBP3-227ENST00000592266 SETDB2Q96T68 719 aa22.84■■□□□ 1.25
RANBP3-227ENST00000592266 RNF181Q9P0P0 153 aa22.84■■□□□ 1.25
RANBP3-227ENST00000592266 PDE6BP35913 854 aa22.83■■□□□ 1.25
RANBP3-227ENST00000592266 BRIP1Q9BX63 1249 aa22.83■■□□□ 1.25
RANBP3-227ENST00000592266 ZNF652Q9Y2D9 606 aa22.83■■□□□ 1.25
RANBP3-227ENST00000592266 MAPK8IP3Q9UPT6 1336 aa22.82■■□□□ 1.24
RANBP3-227ENST00000592266 HSPA6P17066 643 aa22.81■■□□□ 1.24
RANBP3-227ENST00000592266 RALBP1Q15311 655 aa22.81■■□□□ 1.24
RANBP3-227ENST00000592266 PRR5LQ6MZQ0 368 aa22.81■■□□□ 1.24
RANBP3-227ENST00000592266 CLEC4GQ6UXB4 293 aa22.81■■□□□ 1.24
RANBP3-227ENST00000592266 CNBD1Q8NA66 436 aa22.81■■□□□ 1.24
RANBP3-227ENST00000592266 DLEC1Q9Y238 1755 aa22.81■■□□□ 1.24
RANBP3-227ENST00000592266 KDM2BQ8NHM5 1336 aa22.81■■□□□ 1.24
RANBP3-227ENST00000592266 PRAMEF22A3QJZ6 481 aa22.8■■□□□ 1.24
RANBP3-227ENST00000592266 ST5P78524 1137 aa22.8■■□□□ 1.24
RANBP3-227ENST00000592266 NFE2L2Q16236 605 aa22.8■■□□□ 1.24
RANBP3-227ENST00000592266 PLEKHF1Q96S99 279 aa22.8■■□□□ 1.24
RANBP3-227ENST00000592266 ZC3H4Q9UPT8 1303 aaKnown RBP22.8■■□□□ 1.24
RANBP3-227ENST00000592266 RGL2O15211 777 aa22.79■■□□□ 1.24
RANBP3-227ENST00000592266 TOMM70O94826 608 aa22.79■■□□□ 1.24
RANBP3-227ENST00000592266 PIP4K2AP48426 406 aaPredicted RBP22.78■■□□□ 1.24
RANBP3-227ENST00000592266 ZNF622Q969S3 477 aaKnown RBP eCLIP22.78■■□□□ 1.24
RANBP3-227ENST00000592266 BCORQ6W2J9 1755 aa22.78■■□□□ 1.24
RANBP3-227ENST00000592266 LMNB1P20700 586 aa22.77■■□□□ 1.24
RANBP3-227ENST00000592266 NMRK2Q9NPI5 230 aa22.77■■□□□ 1.24
RANBP3-227ENST00000592266 RASSF7Q02833 373 aa22.76■■□□□ 1.23
RANBP3-227ENST00000592266 C16orf71Q8IYS4 520 aaPredicted RBP22.76■■□□□ 1.23
RANBP3-227ENST00000592266 MIS18AQ9NYP9 233 aa22.76■■□□□ 1.23
RANBP3-227ENST00000592266 CEP350Q5VT06 3117 aa22.75■■□□□ 1.23
RANBP3-227ENST00000592266 NBPF5PQ86XG9 351 aaPredicted RBP22.75■■□□□ 1.23
RANBP3-227ENST00000592266 NBPF26B4DH59 902 aa22.74■■□□□ 1.23
RANBP3-227ENST00000592266 NBPF10Q6P3W6 841 aaKnown RBP22.74■■□□□ 1.23
RANBP3-227ENST00000592266 CCDC24Q8N4L8 307 aa22.74■■□□□ 1.23
RANBP3-227ENST00000592266 NBPF15Q8N660 670 aa22.74■■□□□ 1.23
RANBP3-227ENST00000592266 CNKSR1Q969H4 720 aa22.74■■□□□ 1.23
RANBP3-227ENST00000592266 ANKRD31Q8N7Z5 1873 aa22.73■■□□□ 1.23
RANBP3-227ENST00000592266 DLG5Q8TDM6 1919 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms