RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 ANO8Q9HCE9 1232 aaPredicted RBP22.38■■□□□ 1.17
AP3D1-211ENST00000591650 USP16Q9Y5T5 823 aa22.37■■□□□ 1.17
AP3D1-211ENST00000591650 QSER1Q2KHR3 1735 aa22.37■■□□□ 1.17
AP3D1-211ENST00000591650 HOXB7P09629 217 aa22.36■■□□□ 1.17
AP3D1-211ENST00000591650 C4AP0C0L4 1744 aa22.36■■□□□ 1.17
AP3D1-211ENST00000591650 CYP19A1P11511 503 aaPredicted RBP22.36■■□□□ 1.17
AP3D1-211ENST00000591650 TWISTNBQ3B726 338 aaPredicted RBP22.36■■□□□ 1.17
AP3D1-211ENST00000591650 CNTNAP4Q9C0A0 1308 aa22.34■■□□□ 1.17
AP3D1-211ENST00000591650 CRKLP46109 303 aaKnown RBP22.33■■□□□ 1.17
AP3D1-211ENST00000591650 ZNF827Q17R98 1081 aa22.33■■□□□ 1.17
AP3D1-211ENST00000591650 NECTIN2Q92692 538 aa22.33■■□□□ 1.17
AP3D1-211ENST00000591650 TEX13AQ9BXU3 409 aaPredicted RBP22.33■■□□□ 1.17
AP3D1-211ENST00000591650 SOS1Q07889 1333 aaPredicted RBP22.33■■□□□ 1.16
AP3D1-211ENST00000591650 EIF2S2P20042 333 aaKnown RBP22.32■■□□□ 1.16
AP3D1-211ENST00000591650 HDGFL1Q5TGJ6 251 aa22.32■■□□□ 1.16
AP3D1-211ENST00000591650 ZBTB1Q9Y2K1 713 aa22.32■■□□□ 1.16
AP3D1-211ENST00000591650 STARD3NLO95772 234 aa22.31■■□□□ 1.16
AP3D1-211ENST00000591650 PIP4K2AP48426 406 aaPredicted RBP22.31■■□□□ 1.16
AP3D1-211ENST00000591650 AKT1S1Q96B36 256 aa22.31■■□□□ 1.16
AP3D1-211ENST00000591650 CCDC87Q9NVE4 849 aa22.31■■□□□ 1.16
AP3D1-211ENST00000591650 CACNA1FO60840 1977 aa22.31■■□□□ 1.16
AP3D1-211ENST00000591650 VAMP4O75379 141 aa22.31■■□□□ 1.16
AP3D1-211ENST00000591650 A1BGP04217 495 aa22.31■■□□□ 1.16
AP3D1-211ENST00000591650 INTS5Q6P9B9 1019 aaKnown RBP22.31■■□□□ 1.16
AP3D1-211ENST00000591650 AMIGO3Q86WK7 504 aa22.3■■□□□ 1.16
AP3D1-211ENST00000591650 BCORQ6W2J9 1755 aa22.29■■□□□ 1.16
AP3D1-211ENST00000591650 NBPF26B4DH59 902 aa22.29■■□□□ 1.16
AP3D1-211ENST00000591650 SLC15A2Q16348 729 aa22.29■■□□□ 1.16
AP3D1-211ENST00000591650 PROSER3Q2NL68 480 aa22.29■■□□□ 1.16
AP3D1-211ENST00000591650 NBPF14Q5TI25 921 aa22.29■■□□□ 1.16
AP3D1-211ENST00000591650 NBPF10Q6P3W6 841 aaKnown RBP22.29■■□□□ 1.16
AP3D1-211ENST00000591650 NBPF15Q8N660 670 aa22.29■■□□□ 1.16
AP3D1-211ENST00000591650 AK7Q96M32 723 aa22.29■■□□□ 1.16
AP3D1-211ENST00000591650 CHPF2Q9P2E5 772 aa22.29■■□□□ 1.16
AP3D1-211ENST00000591650 SCN7AQ01118 1682 aa22.28■■□□□ 1.16
AP3D1-211ENST00000591650 TCERG1O14776 1098 aaKnown RBP22.28■■□□□ 1.16
AP3D1-211ENST00000591650 GNPATO15228 680 aa22.28■■□□□ 1.16
AP3D1-211ENST00000591650 ANXA1P04083 346 aa22.28■■□□□ 1.16
AP3D1-211ENST00000591650 RC3H1Q5TC82 1133 aaKnown RBP22.28■■□□□ 1.16
AP3D1-211ENST00000591650 ERBB4Q15303 1308 aa22.27■■□□□ 1.16
AP3D1-211ENST00000591650 CANXP27824 592 aaKnown RBP22.27■■□□□ 1.16
AP3D1-211ENST00000591650 R3HDM1Q15032 1099 aaKnown RBP22.27■■□□□ 1.16
AP3D1-211ENST00000591650 SMIM5Q71RC9 77 aa22.27■■□□□ 1.16
AP3D1-211ENST00000591650 STK32BQ9NY57 414 aa22.27■■□□□ 1.16
AP3D1-211ENST00000591650 PSDA5PKW4 1024 aaPredicted RBP22.26■■□□□ 1.15
AP3D1-211ENST00000591650 PDIA6Q15084 440 aa22.26■■□□□ 1.15
AP3D1-211ENST00000591650 COL15A1P39059 1388 aa22.26■■□□□ 1.15
AP3D1-211ENST00000591650 CASZ1Q86V15 1759 aa22.25■■□□□ 1.15
AP3D1-211ENST00000591650 CT47B1P0C2W7 299 aaPredicted RBP22.24■■□□□ 1.15
AP3D1-211ENST00000591650 MYL6BP14649 208 aa22.24■■□□□ 1.15
AP3D1-211ENST00000591650 CCDC30Q5VVM6 783 aa22.24■■□□□ 1.15
AP3D1-211ENST00000591650 LRP10Q7Z4F1 713 aa22.24■■□□□ 1.15
AP3D1-211ENST00000591650 ZNF330Q9Y3S2 320 aaPredicted RBP22.23■■□□□ 1.15
AP3D1-211ENST00000591650 ARFGEF2Q9Y6D5 1785 aa22.23■■□□□ 1.15
AP3D1-211ENST00000591650 RPS6KA4O75676 772 aa22.23■■□□□ 1.15
AP3D1-211ENST00000591650 PHF14O94880 888 aa22.23■■□□□ 1.15
AP3D1-211ENST00000591650 HMGB2P26583 209 aaKnown RBP22.23■■□□□ 1.15
AP3D1-211ENST00000591650 PDGFDQ9GZP0 370 aaPredicted RBP22.23■■□□□ 1.15
AP3D1-211ENST00000591650 DDX21Q9NR30 783 aaKnown RBP eCLIP22.23■■□□□ 1.15
AP3D1-211ENST00000591650 TFCP2L1Q9NZI6 479 aa22.23■■□□□ 1.15
AP3D1-211ENST00000591650 IL6STP40189 918 aaPredicted RBP22.22■■□□□ 1.15
AP3D1-211ENST00000591650 EIF5P55010 431 aaKnown RBP22.22■■□□□ 1.15
AP3D1-211ENST00000591650 SSH1Q8WYL5 1049 aa22.22■■□□□ 1.15
AP3D1-211ENST00000591650 BCL2L13Q9BXK5 485 aa22.22■■□□□ 1.15
AP3D1-211ENST00000591650 DBF4Q9UBU7 674 aaPredicted RBP22.22■■□□□ 1.15
AP3D1-211ENST00000591650 RTCBQ9Y3I0 505 aaKnown RBP22.22■■□□□ 1.15
AP3D1-211ENST00000591650 PNPLA7Q6ZV29 1317 aa22.21■■□□□ 1.15
AP3D1-211ENST00000591650 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.21■■□□□ 1.15
AP3D1-211ENST00000591650 STK31Q9BXU1 1019 aa22.21■■□□□ 1.15
AP3D1-211ENST00000591650 SSFA2P28290 1259 aa22.2■■□□□ 1.14
AP3D1-211ENST00000591650 RARSP54136 660 aaKnown RBP22.19■■□□□ 1.14
AP3D1-211ENST00000591650 ZNF428Q96B54 188 aa22.19■■□□□ 1.14
AP3D1-211ENST00000591650 CHMP4AQ9BY43 222 aa22.19■■□□□ 1.14
AP3D1-211ENST00000591650 ANKRD36CQ5JPF3 1778 aa22.19■■□□□ 1.14
AP3D1-211ENST00000591650 NUP98P52948 1817 aa22.18■■□□□ 1.14
AP3D1-211ENST00000591650 G2E3Q7L622 706 aa22.18■■□□□ 1.14
AP3D1-211ENST00000591650 COL23A1Q86Y22 540 aaPredicted RBP22.18■■□□□ 1.14
AP3D1-211ENST00000591650 PHAXQ9H814 394 aaKnown RBP22.18■■□□□ 1.14
AP3D1-211ENST00000591650 SMC4Q9NTJ3 1288 aa22.18■■□□□ 1.14
AP3D1-211ENST00000591650 SLC4A2P04920 1241 aa22.17■■□□□ 1.14
AP3D1-211ENST00000591650 ADRA2BP18089 450 aa22.17■■□□□ 1.14
AP3D1-211ENST00000591650 ALDH1L2Q3SY69 923 aa22.17■■□□□ 1.14
AP3D1-211ENST00000591650 MRPL50Q8N5N7 158 aaKnown RBP22.17■■□□□ 1.14
AP3D1-211ENST00000591650 XAGE3Q8WTP9 111 aa22.17■■□□□ 1.14
AP3D1-211ENST00000591650 HYPKQ9NX55 129 aa22.17■■□□□ 1.14
AP3D1-211ENST00000591650 TTLL7Q6ZT98 887 aa22.16■■□□□ 1.14
AP3D1-211ENST00000591650 ARHGEF1Q92888 912 aaKnown RBP22.15■■□□□ 1.14
AP3D1-211ENST00000591650 N4BP2Q86UW6 1770 aaPredicted RBP22.15■■□□□ 1.14
AP3D1-211ENST00000591650 AIMP1Q12904 312 aaKnown RBP22.14■■□□□ 1.14
AP3D1-211ENST00000591650 TRAPPC3LQ5T215 181 aa22.14■■□□□ 1.14
AP3D1-211ENST00000591650 COPS6Q7L5N1 327 aa22.14■■□□□ 1.14
AP3D1-211ENST00000591650 SRP68Q9UHB9 627 aaKnown RBP22.14■■□□□ 1.14
AP3D1-211ENST00000591650 TBC1D2BQ9UPU7 963 aa22.14■■□□□ 1.14
AP3D1-211ENST00000591650 USP42Q9H9J4 1324 aaKnown RBP22.14■■□□□ 1.14
AP3D1-211ENST00000591650 BCAR3O75815 825 aa22.14■■□□□ 1.13
AP3D1-211ENST00000591650 FLIIQ13045 1269 aa22.14■■□□□ 1.13
AP3D1-211ENST00000591650 DZIP3Q86Y13 1208 aaKnown RBP22.14■■□□□ 1.13
AP3D1-211ENST00000591650 A0A087WZG4 1122 aa22.13■■□□□ 1.13
AP3D1-211ENST00000591650 NPM2Q86SE8 214 aaKnown RBP22.13■■□□□ 1.13
AP3D1-211ENST00000591650 RCAN3Q9UKA8 241 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms