RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 SNRPA1P09661 255 aaKnown RBP32.38■■■□□ 2.77
RUNDC3A-206ENST00000590941 KSR2Q6VAB6 950 aa32.38■■■□□ 2.77
RUNDC3A-206ENST00000590941 LAMB4A4D0S4 1761 aa32.37■■■□□ 2.77
RUNDC3A-206ENST00000590941 TBC1D32Q96NH3 1257 aa32.36■■■□□ 2.77
RUNDC3A-206ENST00000590941 SEC24BO95487 1268 aa32.35■■■□□ 2.77
RUNDC3A-206ENST00000590941 STRN4Q9NRL3 753 aa32.34■■■□□ 2.77
RUNDC3A-206ENST00000590941 LRRFIP2Q9Y608 721 aaKnown RBP32.34■■■□□ 2.77
RUNDC3A-206ENST00000590941 SHANK3Q9BYB0 1731 aa32.33■■■□□ 2.77
RUNDC3A-206ENST00000590941 SLC39A6Q13433 755 aa32.33■■■□□ 2.77
RUNDC3A-206ENST00000590941 LARP1Q6PKG0 1096 aaKnown RBP32.33■■■□□ 2.77
RUNDC3A-206ENST00000590941 PLEKHM2Q8IWE5 1019 aa32.33■■■□□ 2.77
RUNDC3A-206ENST00000590941 ERBB4Q15303 1308 aa32.32■■■□□ 2.77
RUNDC3A-206ENST00000590941 ZNF496Q96IT1 587 aaPredicted RBP32.31■■■□□ 2.76
RUNDC3A-206ENST00000590941 PAPPAQ13219 1627 aa32.31■■■□□ 2.76
RUNDC3A-206ENST00000590941 MAP3K2Q9Y2U5 619 aa32.31■■■□□ 2.76
RUNDC3A-206ENST00000590941 PLCH1Q4KWH8 1693 aa32.3■■■□□ 2.76
RUNDC3A-206ENST00000590941 UBR2Q8IWV8 1755 aa32.3■■■□□ 2.76
RUNDC3A-206ENST00000590941 SSH3Q8TE77 659 aa32.29■■■□□ 2.76
RUNDC3A-206ENST00000590941 ANXA1P04083 346 aa32.28■■■□□ 2.76
RUNDC3A-206ENST00000590941 BECN1Q14457 450 aa32.28■■■□□ 2.76
RUNDC3A-206ENST00000590941 PDIA6Q15084 440 aa32.28■■■□□ 2.76
RUNDC3A-206ENST00000590941 TTC22Q5TAA0 569 aa32.28■■■□□ 2.76
RUNDC3A-206ENST00000590941 LINS1Q8NG48 757 aa32.28■■■□□ 2.76
RUNDC3A-206ENST00000590941 PROSER3Q2NL68 480 aa32.27■■■□□ 2.76
RUNDC3A-206ENST00000590941 LRRCC1Q9C099 1032 aa32.27■■■□□ 2.76
RUNDC3A-206ENST00000590941 PRAMEF22A3QJZ6 481 aa32.27■■■□□ 2.76
RUNDC3A-206ENST00000590941 RAB11FIP3O75154 756 aa32.27■■■□□ 2.76
RUNDC3A-206ENST00000590941 GLI3P10071 1580 aa32.26■■■□□ 2.76
RUNDC3A-206ENST00000590941 CDC45O75419 566 aa32.26■■■□□ 2.75
RUNDC3A-206ENST00000590941 OSBPL3Q9H4L5 887 aa32.26■■■□□ 2.75
RUNDC3A-206ENST00000590941 BTG4Q9NY30 223 aa32.26■■■□□ 2.75
RUNDC3A-206ENST00000590941 COL16A1Q07092 1604 aaPredicted RBP32.26■■■□□ 2.75
RUNDC3A-206ENST00000590941 PNMA6EA0A0J9YXQ4 647 aa32.24■■■□□ 2.75
RUNDC3A-206ENST00000590941 NEXNQ0ZGT2 675 aa32.24■■■□□ 2.75
RUNDC3A-206ENST00000590941 POLA2Q14181 598 aa32.24■■■□□ 2.75
RUNDC3A-206ENST00000590941 HSP90AB4PQ58FF6 505 aa32.24■■■□□ 2.75
RUNDC3A-206ENST00000590941 C22orf23Q9BZE7 217 aa32.24■■■□□ 2.75
RUNDC3A-206ENST00000590941 MFAP1P55081 439 aaKnown RBP32.23■■■□□ 2.75
RUNDC3A-206ENST00000590941 MTX1Q13505 466 aa32.23■■■□□ 2.75
RUNDC3A-206ENST00000590941 C9orf78Q9NZ63 289 aaPredicted RBP32.23■■■□□ 2.75
RUNDC3A-206ENST00000590941 PHLPP1O60346 1717 aa32.23■■■□□ 2.75
RUNDC3A-206ENST00000590941 UTYO14607 1347 aa32.22■■■□□ 2.75
RUNDC3A-206ENST00000590941 DISP2A7MBM2 1401 aa32.21■■■□□ 2.75
RUNDC3A-206ENST00000590941 TNS2Q63HR2 1409 aa32.21■■■□□ 2.75
RUNDC3A-206ENST00000590941 RIC3Q7Z5B4 369 aa32.21■■■□□ 2.75
RUNDC3A-206ENST00000590941 NBPF7P0C2Y1 421 aaPredicted RBP32.2■■■□□ 2.74
RUNDC3A-206ENST00000590941 EXOC6BQ9Y2D4 811 aa32.2■■■□□ 2.74
RUNDC3A-206ENST00000590941 LRP6O75581 1613 aa32.19■■■□□ 2.74
RUNDC3A-206ENST00000590941 CASC1Q6TDU7 716 aa32.19■■■□□ 2.74
RUNDC3A-206ENST00000590941 PPP1R42Q7Z4L9 355 aa32.19■■■□□ 2.74
RUNDC3A-206ENST00000590941 KCPQ6ZWJ8 1503 aa32.19■■■□□ 2.74
RUNDC3A-206ENST00000590941 GSPT1P15170 499 aaKnown RBP32.18■■■□□ 2.74
RUNDC3A-206ENST00000590941 AEBP2Q6ZN18 517 aaPredicted RBP32.18■■■□□ 2.74
RUNDC3A-206ENST00000590941 DDX54Q8TDD1 881 aaKnown RBP32.18■■■□□ 2.74
RUNDC3A-206ENST00000590941 AOX1Q06278 1338 aa32.18■■■□□ 2.74
RUNDC3A-206ENST00000590941 WNK3Q9BYP7 1800 aa32.17■■■□□ 2.74
RUNDC3A-206ENST00000590941 SMARCA5O60264 1052 aaPredicted RBP32.17■■■□□ 2.74
RUNDC3A-206ENST00000590941 TBC1D9Q6ZT07 1266 aa32.17■■■□□ 2.74
RUNDC3A-206ENST00000590941 XAGE3Q8WTP9 111 aa32.17■■■□□ 2.74
RUNDC3A-206ENST00000590941 USP16Q9Y5T5 823 aa32.17■■■□□ 2.74
RUNDC3A-206ENST00000590941 APBB1O00213 710 aa32.16■■■□□ 2.74
RUNDC3A-206ENST00000590941 GRM8O00222 908 aa32.16■■■□□ 2.74
RUNDC3A-206ENST00000590941 SRGAP3O43295 1099 aa32.16■■■□□ 2.74
RUNDC3A-206ENST00000590941 RBM25P49756 843 aaKnown RBP32.16■■■□□ 2.74
RUNDC3A-206ENST00000590941 AIMP1Q12904 312 aaKnown RBP32.16■■■□□ 2.74
RUNDC3A-206ENST00000590941 C16orf71Q8IYS4 520 aaPredicted RBP32.16■■■□□ 2.74
RUNDC3A-206ENST00000590941 METTL22Q9BUU2 404 aaPredicted RBP32.16■■■□□ 2.74
RUNDC3A-206ENST00000590941 CDCA7Q9BWT1 371 aaPredicted RBP32.16■■■□□ 2.74
RUNDC3A-206ENST00000590941 MYL6BP14649 208 aa32.15■■■□□ 2.74
RUNDC3A-206ENST00000590941 LRP10Q7Z4F1 713 aa32.15■■■□□ 2.74
RUNDC3A-206ENST00000590941 TOGARAM1Q9Y4F4 1720 aa32.15■■■□□ 2.74
RUNDC3A-206ENST00000590941 PDE1AP54750 535 aa32.15■■■□□ 2.74
RUNDC3A-206ENST00000590941 ANKRD13DQ6ZTN6 518 aa32.15■■■□□ 2.74
RUNDC3A-206ENST00000590941 COPS6Q7L5N1 327 aa32.15■■■□□ 2.74
RUNDC3A-206ENST00000590941 TOM1O60784 492 aa32.14■■■□□ 2.74
RUNDC3A-206ENST00000590941 KIF1BPQ96EK5 621 aa32.14■■■□□ 2.74
RUNDC3A-206ENST00000590941 TMOD3Q9NYL9 352 aa32.14■■■□□ 2.74
RUNDC3A-206ENST00000590941 SALL3Q9BXA9 1300 aa32.13■■■□□ 2.73
RUNDC3A-206ENST00000590941 SURF6O75683 361 aaKnown RBP32.11■■■□□ 2.73
RUNDC3A-206ENST00000590941 STAP2Q9UGK3 403 aa32.11■■■□□ 2.73
RUNDC3A-206ENST00000590941 MX1P20591 662 aa32.11■■■□□ 2.73
RUNDC3A-206ENST00000590941 TEX13AQ9BXU3 409 aaPredicted RBP32.11■■■□□ 2.73
RUNDC3A-206ENST00000590941 ARFGEF2Q9Y6D5 1785 aa32.11■■■□□ 2.73
RUNDC3A-206ENST00000590941 COL15A1P39059 1388 aa32.1■■■□□ 2.73
RUNDC3A-206ENST00000590941 CWF19L2Q2TBE0 894 aaKnown RBP32.1■■■□□ 2.73
RUNDC3A-206ENST00000590941 ERC1Q8IUD2 1116 aa32.1■■■□□ 2.73
RUNDC3A-206ENST00000590941 PLBD2Q8NHP8 589 aa32.1■■■□□ 2.73
RUNDC3A-206ENST00000590941 OTUD7AQ8TE49 926 aaPredicted RBP32.1■■■□□ 2.73
RUNDC3A-206ENST00000590941 NEURL1BA8MQ27 555 aa32.09■■■□□ 2.73
RUNDC3A-206ENST00000590941 NRAPQ86VF7 1730 aa32.09■■■□□ 2.73
RUNDC3A-206ENST00000590941 VSIG10Q8N0Z9 540 aa32.09■■■□□ 2.73
RUNDC3A-206ENST00000590941 THRAP3Q9Y2W1 955 aaKnown RBP32.09■■■□□ 2.73
RUNDC3A-206ENST00000590941 USP35Q9P2H5 1018 aa32.08■■■□□ 2.73
RUNDC3A-206ENST00000590941 SDSP20132 328 aa32.08■■■□□ 2.73
RUNDC3A-206ENST00000590941 IGKV5-2P06315 115 aa32.07■■■□□ 2.72
RUNDC3A-206ENST00000590941 NWD2Q9ULI1 1742 aa32.06■■■□□ 2.72
RUNDC3A-206ENST00000590941 GCKRQ14397 625 aa32.06■■■□□ 2.72
RUNDC3A-206ENST00000590941 RHPN1Q8TCX5 695 aa32.06■■■□□ 2.72
RUNDC3A-206ENST00000590941 MYD88Q99836 296 aa32.05■■■□□ 2.72
RUNDC3A-206ENST00000590941 TUBGCP6Q96RT7 1819 aa32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms