RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 POLD1P28340 1107 aa19.2■□□□□ 0.66
CXXC1-213ENST00000590234 MSL1Q68DK7 614 aa19.2■□□□□ 0.66
CXXC1-213ENST00000590234 TRIM35Q9UPQ4 493 aa19.2■□□□□ 0.66
CXXC1-213ENST00000590234 C4AP0C0L4 1744 aa19.2■□□□□ 0.66
CXXC1-213ENST00000590234 ZBTB1Q9Y2K1 713 aa19.19■□□□□ 0.66
CXXC1-213ENST00000590234 SNRPA1P09661 255 aaKnown RBP19.18■□□□□ 0.66
CXXC1-213ENST00000590234 ARHGEF1Q92888 912 aaKnown RBP19.18■□□□□ 0.66
CXXC1-213ENST00000590234 RFC4P35249 363 aa19.17■□□□□ 0.66
CXXC1-213ENST00000590234 ARXQ96QS3 562 aa19.17■□□□□ 0.66
CXXC1-213ENST00000590234 BABAM1Q9NWV8 329 aa19.17■□□□□ 0.66
CXXC1-213ENST00000590234 TSPYL4Q9UJ04 414 aa19.17■□□□□ 0.66
CXXC1-213ENST00000590234 SOS1Q07889 1333 aaPredicted RBP19.17■□□□□ 0.66
CXXC1-213ENST00000590234 LAMB4A4D0S4 1761 aa19.15■□□□□ 0.66
CXXC1-213ENST00000590234 PRAMEF22A3QJZ6 481 aa19.15■□□□□ 0.66
CXXC1-213ENST00000590234 CANXP27824 592 aaKnown RBP19.15■□□□□ 0.66
CXXC1-213ENST00000590234 EIF4A1P60842 406 aaKnown RBP19.15■□□□□ 0.66
CXXC1-213ENST00000590234 USP16Q9Y5T5 823 aa19.15■□□□□ 0.66
CXXC1-213ENST00000590234 COL15A1P39059 1388 aa19.15■□□□□ 0.66
CXXC1-213ENST00000590234 FAM9BQ8IZU0 186 aa19.14■□□□□ 0.65
CXXC1-213ENST00000590234 LAS1LQ9Y4W2 734 aaKnown RBP19.13■□□□□ 0.65
CXXC1-213ENST00000590234 USP42Q9H9J4 1324 aaKnown RBP19.13■□□□□ 0.65
CXXC1-213ENST00000590234 GIGYF1O75420 1035 aaPredicted RBP19.12■□□□□ 0.65
CXXC1-213ENST00000590234 A1BGP04217 495 aa19.12■□□□□ 0.65
CXXC1-213ENST00000590234 GYS1P13807 737 aa19.12■□□□□ 0.65
CXXC1-213ENST00000590234 SRP68Q9UHB9 627 aaKnown RBP19.12■□□□□ 0.65
CXXC1-213ENST00000590234 CHL1O00533 1208 aa19.11■□□□□ 0.65
CXXC1-213ENST00000590234 ZPR1O75312 459 aa19.11■□□□□ 0.65
CXXC1-213ENST00000590234 IL6STP40189 918 aaPredicted RBP19.11■□□□□ 0.65
CXXC1-213ENST00000590234 EIF5P55010 431 aaKnown RBP19.11■□□□□ 0.65
CXXC1-213ENST00000590234 CALD1Q05682 793 aaKnown RBP19.11■□□□□ 0.65
CXXC1-213ENST00000590234 NLGN1Q8N2Q7 840 aa19.11■□□□□ 0.65
CXXC1-213ENST00000590234 FHDC1Q9C0D6 1143 aaPredicted RBP19.11■□□□□ 0.65
CXXC1-213ENST00000590234 ZNF330Q9Y3S2 320 aaPredicted RBP19.11■□□□□ 0.65
CXXC1-213ENST00000590234 A0A087WZG4 1122 aa19.1■□□□□ 0.65
CXXC1-213ENST00000590234 SENP3-EIF4A1A0A087X0R7 540 aa19.1■□□□□ 0.65
CXXC1-213ENST00000590234 DIEXFQ68CQ4 756 aaKnown RBP19.1■□□□□ 0.65
CXXC1-213ENST00000590234 NPM2Q86SE8 214 aaKnown RBP19.1■□□□□ 0.65
CXXC1-213ENST00000590234 CFAP44Q96MT7 982 aa19.1■□□□□ 0.65
CXXC1-213ENST00000590234 CCDC27Q2M243 656 aa19.09■□□□□ 0.65
CXXC1-213ENST00000590234 USPL1Q5W0Q7 1092 aa19.09■□□□□ 0.65
CXXC1-213ENST00000590234 KLHL34Q8N239 644 aa19.09■□□□□ 0.65
CXXC1-213ENST00000590234 NARFQ9UHQ1 456 aa19.09■□□□□ 0.65
CXXC1-213ENST00000590234 CCER2I3L3R5 266 aa19.08■□□□□ 0.64
CXXC1-213ENST00000590234 MMP10P09238 476 aa19.08■□□□□ 0.64
CXXC1-213ENST00000590234 PIP4K2AP48426 406 aaPredicted RBP19.08■□□□□ 0.64
CXXC1-213ENST00000590234 SYT17Q9BSW7 474 aa19.08■□□□□ 0.64
CXXC1-213ENST00000590234 IFT57Q9NWB7 429 aa19.08■□□□□ 0.64
CXXC1-213ENST00000590234 GNAI1P63096 354 aa19.07■□□□□ 0.64
CXXC1-213ENST00000590234 FKBP8Q14318 412 aa19.07■□□□□ 0.64
CXXC1-213ENST00000590234 NCBP3Q53F19 620 aaKnown RBP19.07■□□□□ 0.64
CXXC1-213ENST00000590234 SCN7AQ01118 1682 aa19.07■□□□□ 0.64
CXXC1-213ENST00000590234 ZNF853P0CG23 659 aa19.06■□□□□ 0.64
CXXC1-213ENST00000590234 MBIPQ9NS73 344 aa19.06■□□□□ 0.64
CXXC1-213ENST00000590234 NBPF26B4DH59 902 aa19.05■□□□□ 0.64
CXXC1-213ENST00000590234 NBPF10Q6P3W6 841 aaKnown RBP19.05■□□□□ 0.64
CXXC1-213ENST00000590234 WWC1Q8IX03 1113 aa19.05■□□□□ 0.64
CXXC1-213ENST00000590234 NBPF15Q8N660 670 aa19.05■□□□□ 0.64
CXXC1-213ENST00000590234 TBC1D2BQ9UPU7 963 aa19.05■□□□□ 0.64
CXXC1-213ENST00000590234 DZIP3Q86Y13 1208 aaKnown RBP19.04■□□□□ 0.64
CXXC1-213ENST00000590234 BCORQ6W2J9 1755 aa19.04■□□□□ 0.64
CXXC1-213ENST00000590234 EIF2S2P20042 333 aaKnown RBP19.03■□□□□ 0.64
CXXC1-213ENST00000590234 KRT24Q2M2I5 525 aa19.03■□□□□ 0.64
CXXC1-213ENST00000590234 BCL2L12Q9HB09 334 aa19.03■□□□□ 0.64
CXXC1-213ENST00000590234 SALL2Q9Y467 1007 aaPredicted RBP19.03■□□□□ 0.64
CXXC1-213ENST00000590234 PARP3Q9Y6F1 533 aa19.03■□□□□ 0.64
CXXC1-213ENST00000590234 ERBB4Q15303 1308 aa19.02■□□□□ 0.64
CXXC1-213ENST00000590234 CD2APQ9Y5K6 639 aa19.02■□□□□ 0.64
CXXC1-213ENST00000590234 CAMTA2O94983 1202 aa19.01■□□□□ 0.63
CXXC1-213ENST00000590234 DDR1Q08345 913 aa19.01■□□□□ 0.63
CXXC1-213ENST00000590234 NGEFQ8N5V2 710 aa19.01■□□□□ 0.63
CXXC1-213ENST00000590234 HOXB7P09629 217 aa19■□□□□ 0.63
CXXC1-213ENST00000590234 MYL6BP14649 208 aa19■□□□□ 0.63
CXXC1-213ENST00000590234 TM4SF1P30408 202 aa19■□□□□ 0.63
CXXC1-213ENST00000590234 NFIXQ14938 502 aa19■□□□□ 0.63
CXXC1-213ENST00000590234 NLGN2Q8NFZ4 835 aa19■□□□□ 0.63
CXXC1-213ENST00000590234 IL16Q14005 1332 aa19■□□□□ 0.63
CXXC1-213ENST00000590234 POLRMTO00411 1230 aaKnown RBP18.99■□□□□ 0.63
CXXC1-213ENST00000590234 C10orf71Q711Q0 1435 aa18.99■□□□□ 0.63
CXXC1-213ENST00000590234 KIF13BQ9NQT8 1826 aa18.98■□□□□ 0.63
CXXC1-213ENST00000590234 HDGFL1Q5TGJ6 251 aa18.98■□□□□ 0.63
CXXC1-213ENST00000590234 DUSP27Q5VZP5 1158 aa18.98■□□□□ 0.63
CXXC1-213ENST00000590234 BICDL1Q6ZP65 573 aa18.98■□□□□ 0.63
CXXC1-213ENST00000590234 WDR63Q8IWG1 891 aa18.98■□□□□ 0.63
CXXC1-213ENST00000590234 MIER1Q8N108 512 aa18.98■□□□□ 0.63
CXXC1-213ENST00000590234 NECTIN2Q92692 538 aa18.98■□□□□ 0.63
CXXC1-213ENST00000590234 DCAF8L1A6NGE4 600 aa18.97■□□□□ 0.63
CXXC1-213ENST00000590234 PDIA6Q15084 440 aa18.97■□□□□ 0.63
CXXC1-213ENST00000590234 TBC1D9BQ66K14 1250 aa18.97■□□□□ 0.63
CXXC1-213ENST00000590234 TSR2Q969E8 191 aaKnown RBP18.97■□□□□ 0.63
CXXC1-213ENST00000590234 ZNF652Q9Y2D9 606 aa18.97■□□□□ 0.63
CXXC1-213ENST00000590234 RGL2O15211 777 aa18.96■□□□□ 0.63
CXXC1-213ENST00000590234 CLEC4GQ6UXB4 293 aa18.96■□□□□ 0.63
CXXC1-213ENST00000590234 KIF6Q6ZMV9 814 aa18.96■□□□□ 0.63
CXXC1-213ENST00000590234 AFDNP55196 1824 aaKnown RBP18.95■□□□□ 0.62
CXXC1-213ENST00000590234 CARMIL3Q8ND23 1372 aa18.95■□□□□ 0.62
CXXC1-213ENST00000590234 NRXN2Q9P2S2 1712 aa18.95■□□□□ 0.62
CXXC1-213ENST00000590234 PROSER3Q2NL68 480 aa18.95■□□□□ 0.62
CXXC1-213ENST00000590234 ELL2O00472 640 aaPredicted RBP18.94■□□□□ 0.62
CXXC1-213ENST00000590234 ANXA1P04083 346 aa18.94■□□□□ 0.62
CXXC1-213ENST00000590234 SERPINB2P05120 415 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 465 ms