RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 LRRC4BQ9NT99 713 aa13.85□□□□□ -0.19
SDF2-208ENST00000589788 HMGB2P26583 209 aaKnown RBP13.84□□□□□ -0.19
SDF2-208ENST00000589788 KCNQ4P56696 695 aa13.84□□□□□ -0.19
SDF2-208ENST00000589788 CABP4P57796 275 aa13.84□□□□□ -0.19
SDF2-208ENST00000589788 AKAP4Q5JQC9 854 aa13.84□□□□□ -0.19
SDF2-208ENST00000589788 PAPPAQ13219 1627 aa13.83□□□□□ -0.2
SDF2-208ENST00000589788 E2F4Q16254 413 aa13.83□□□□□ -0.2
SDF2-208ENST00000589788 KDM6AO15550 1401 aaPredicted RBP13.83□□□□□ -0.2
SDF2-208ENST00000589788 PRKAR2BP31323 418 aa13.82□□□□□ -0.2
SDF2-208ENST00000589788 MTHFSDQ2M296 383 aaKnown RBP13.82□□□□□ -0.2
SDF2-208ENST00000589788 ASAP1Q9ULH1 1129 aa13.82□□□□□ -0.2
SDF2-208ENST00000589788 SCN11AQ9UI33 1791 aa13.82□□□□□ -0.2
SDF2-208ENST00000589788 LRP5O75197 1615 aa13.82□□□□□ -0.2
SDF2-208ENST00000589788 CLCN6P51797 869 aa13.81□□□□□ -0.2
SDF2-208ENST00000589788 GAS2L2Q8NHY3 880 aa13.81□□□□□ -0.2
SDF2-208ENST00000589788 RSPH6AQ9H0K4 717 aa13.81□□□□□ -0.2
SDF2-208ENST00000589788 VIRMAQ69YN4 1812 aaKnown RBP13.8□□□□□ -0.2
SDF2-208ENST00000589788 C5P01031 1676 aa13.8□□□□□ -0.2
SDF2-208ENST00000589788 FCHSD2O94868 740 aa13.8□□□□□ -0.2
SDF2-208ENST00000589788 ZNF827Q17R98 1081 aa13.8□□□□□ -0.2
SDF2-208ENST00000589788 ARHGEF1Q92888 912 aaKnown RBP13.8□□□□□ -0.2
SDF2-208ENST00000589788 LARP6Q9BRS8 491 aaKnown RBP13.8□□□□□ -0.2
SDF2-208ENST00000589788 ATG3Q9NT62 314 aa13.8□□□□□ -0.2
SDF2-208ENST00000589788 TFCP2L1Q9NZI6 479 aa13.8□□□□□ -0.2
SDF2-208ENST00000589788 MYBBP1AQ9BQG0 1328 aaKnown RBP13.8□□□□□ -0.2
SDF2-208ENST00000589788 CASZ1Q86V15 1759 aa13.79□□□□□ -0.2
SDF2-208ENST00000589788 LOC102724428A0A0B4J2F2 783 aa13.79□□□□□ -0.2
SDF2-208ENST00000589788 NEFMP07197 916 aa13.79□□□□□ -0.2
SDF2-208ENST00000589788 ATN1P54259 1190 aaPredicted RBP13.79□□□□□ -0.2
SDF2-208ENST00000589788 SIK1P57059 783 aa13.79□□□□□ -0.2
SDF2-208ENST00000589788 NFATC2IPQ8NCF5 419 aa13.79□□□□□ -0.2
SDF2-208ENST00000589788 SPON1Q9HCB6 807 aa13.79□□□□□ -0.2
SDF2-208ENST00000589788 MAP3K5Q99683 1374 aa13.79□□□□□ -0.2
SDF2-208ENST00000589788 TAF1LQ8IZX4 1826 aa13.78□□□□□ -0.2
SDF2-208ENST00000589788 RNMTO43148 476 aaKnown RBP13.78□□□□□ -0.2
SDF2-208ENST00000589788 PDE4AP27815 886 aa13.78□□□□□ -0.2
SDF2-208ENST00000589788 PDCD7Q8N8D1 485 aaKnown RBP13.78□□□□□ -0.2
SDF2-208ENST00000589788 PDGFDQ9GZP0 370 aaPredicted RBP13.78□□□□□ -0.2
SDF2-208ENST00000589788 LGR6Q9HBX8 967 aa13.78□□□□□ -0.2
SDF2-208ENST00000589788 GNAT3A8MTJ3 354 aa13.77□□□□□ -0.21
SDF2-208ENST00000589788 ATP6V1AP38606 617 aa13.77□□□□□ -0.21
SDF2-208ENST00000589788 PHACTR3Q96KR7 559 aa13.77□□□□□ -0.21
SDF2-208ENST00000589788 SLC52A2Q9HAB3 445 aa13.77□□□□□ -0.21
SDF2-208ENST00000589788 QSER1Q2KHR3 1735 aa13.77□□□□□ -0.21
SDF2-208ENST00000589788 ATMINO43313 823 aaPredicted RBP13.76□□□□□ -0.21
SDF2-208ENST00000589788 ZBTB7AO95365 584 aa13.76□□□□□ -0.21
SDF2-208ENST00000589788 ASTLQ6HA08 431 aaPredicted RBP13.76□□□□□ -0.21
SDF2-208ENST00000589788 DPY19L2Q6NUT2 758 aa13.76□□□□□ -0.21
SDF2-208ENST00000589788 PNNQ9H307 717 aaKnown RBP13.76□□□□□ -0.21
SDF2-208ENST00000589788 PRKRIP1Q9H875 184 aaPredicted RBP13.76□□□□□ -0.21
SDF2-208ENST00000589788 C4BP0C0L5 1744 aa13.76□□□□□ -0.21
SDF2-208ENST00000589788 TUBGCP6Q96RT7 1819 aa13.75□□□□□ -0.21
SDF2-208ENST00000589788 AK7Q96M32 723 aa13.75□□□□□ -0.21
SDF2-208ENST00000589788 MRC1P22897 1456 aa13.75□□□□□ -0.21
SDF2-208ENST00000589788 ADAMTS7Q9UKP4 1686 aa13.75□□□□□ -0.21
SDF2-208ENST00000589788 PTCD1O75127 700 aaKnown RBP13.74□□□□□ -0.21
SDF2-208ENST00000589788 TEFQ10587 303 aa13.74□□□□□ -0.21
SDF2-208ENST00000589788 PNPLA7Q6ZV29 1317 aa13.74□□□□□ -0.21
SDF2-208ENST00000589788 RTF1Q92541 710 aaKnown RBP13.74□□□□□ -0.21
SDF2-208ENST00000589788 DDX27Q96GQ7 796 aaKnown RBP13.74□□□□□ -0.21
SDF2-208ENST00000589788 MTFR1LQ9H019 292 aa13.74□□□□□ -0.21
SDF2-208ENST00000589788 PPP1R1BQ9UD71 204 aaPredicted RBP13.74□□□□□ -0.21
SDF2-208ENST00000589788 ZNF831Q5JPB2 1677 aa13.73□□□□□ -0.21
SDF2-208ENST00000589788 MAPK8IP3Q9UPT6 1336 aa13.73□□□□□ -0.21
SDF2-208ENST00000589788 CAMK2BQ13554 666 aa13.73□□□□□ -0.21
SDF2-208ENST00000589788 ITPK1Q13572 414 aa13.73□□□□□ -0.21
SDF2-208ENST00000589788 LINC00116Q8NCU8 138 aa13.73□□□□□ -0.21
SDF2-208ENST00000589788 IRX5P78411 483 aaPredicted RBP13.72□□□□□ -0.21
SDF2-208ENST00000589788 FLAD1Q8NFF5 587 aa13.72□□□□□ -0.21
SDF2-208ENST00000589788 IL17REQ8NFR9 667 aa13.72□□□□□ -0.21
SDF2-208ENST00000589788 SLC16A10Q8TF71 515 aa13.72□□□□□ -0.21
SDF2-208ENST00000589788 SLC39A6Q13433 755 aa13.71□□□□□ -0.21
SDF2-208ENST00000589788 WDR43Q15061 677 aaKnown RBP eCLIP13.71□□□□□ -0.21
SDF2-208ENST00000589788 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.71□□□□□ -0.21
SDF2-208ENST00000589788 TTC5Q8N0Z6 440 aa13.71□□□□□ -0.21
SDF2-208ENST00000589788 GNPATO15228 680 aa13.7□□□□□ -0.22
SDF2-208ENST00000589788 PHF14O94880 888 aa13.7□□□□□ -0.22
SDF2-208ENST00000589788 COL23A1Q86Y22 540 aaPredicted RBP13.7□□□□□ -0.22
SDF2-208ENST00000589788 MICALL2Q8IY33 904 aa13.7□□□□□ -0.22
SDF2-208ENST00000589788 SLC4A9Q96Q91 983 aa13.7□□□□□ -0.22
SDF2-208ENST00000589788 ARIH1Q9Y4X5 557 aaPredicted RBP13.7□□□□□ -0.22
SDF2-208ENST00000589788 UBR3Q6ZT12 1888 aa13.7□□□□□ -0.22
SDF2-208ENST00000589788 CEMIPQ8WUJ3 1361 aa13.7□□□□□ -0.22
SDF2-208ENST00000589788 HTATSF1O43719 755 aaKnown RBP13.69□□□□□ -0.22
SDF2-208ENST00000589788 MCM10Q7L590 875 aa13.69□□□□□ -0.22
SDF2-208ENST00000589788 PLEKHF1Q96S99 279 aa13.69□□□□□ -0.22
SDF2-208ENST00000589788 SIPA1L3O60292 1781 aaPredicted RBP13.69□□□□□ -0.22
SDF2-208ENST00000589788 COL5A3P25940 1745 aaPredicted RBP13.69□□□□□ -0.22
SDF2-208ENST00000589788 DLG5Q8TDM6 1919 aa13.68□□□□□ -0.22
SDF2-208ENST00000589788 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.68□□□□□ -0.22
SDF2-208ENST00000589788 ANP32CO43423 234 aa13.68□□□□□ -0.22
SDF2-208ENST00000589788 SSFA2P28290 1259 aa13.68□□□□□ -0.22
SDF2-208ENST00000589788 POLD1P28340 1107 aa13.68□□□□□ -0.22
SDF2-208ENST00000589788 PTGER2P43116 358 aa13.68□□□□□ -0.22
SDF2-208ENST00000589788 NFE2L2Q16236 605 aa13.68□□□□□ -0.22
SDF2-208ENST00000589788 GPHNQ9NQX3 736 aaPredicted RBP13.68□□□□□ -0.22
SDF2-208ENST00000589788 TJP1Q07157 1748 aa13.68□□□□□ -0.22
SDF2-208ENST00000589788 CNTNAP4Q9C0A0 1308 aa13.68□□□□□ -0.22
SDF2-208ENST00000589788 BTBD11A6QL63 1104 aa13.67□□□□□ -0.22
SDF2-208ENST00000589788 SEMA3EO15041 775 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms