RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 STARD3NLO95772 234 aa19.55■□□□□ 0.72
DNMT1-217ENST00000589091 U2AF1L5P0DN76 240 aaPredicted RBP19.55■□□□□ 0.72
DNMT1-217ENST00000589091 U2AF1Q01081 240 aaKnown RBP eCLIP19.55■□□□□ 0.72
DNMT1-217ENST00000589091 ZNF790Q6PG37 636 aa19.55■□□□□ 0.72
DNMT1-217ENST00000589091 TEX13AQ9BXU3 409 aaPredicted RBP19.55■□□□□ 0.72
DNMT1-217ENST00000589091 HEG1Q9ULI3 1381 aa19.55■□□□□ 0.72
DNMT1-217ENST00000589091 SBF1O95248 1867 aa19.54■□□□□ 0.72
DNMT1-217ENST00000589091 ATP10DQ9P241 1426 aa19.54■□□□□ 0.72
DNMT1-217ENST00000589091 GIGYF1O75420 1035 aaPredicted RBP19.54■□□□□ 0.72
DNMT1-217ENST00000589091 FKBP8Q14318 412 aa19.54■□□□□ 0.72
DNMT1-217ENST00000589091 NARFQ9UHQ1 456 aa19.54■□□□□ 0.72
DNMT1-217ENST00000589091 ZBTB1Q9Y2K1 713 aa19.54■□□□□ 0.72
DNMT1-217ENST00000589091 ADCY9O60503 1353 aa19.54■□□□□ 0.72
DNMT1-217ENST00000589091 LAMB4A4D0S4 1761 aa19.53■□□□□ 0.72
DNMT1-217ENST00000589091 PHACTR3Q96KR7 559 aa19.53■□□□□ 0.72
DNMT1-217ENST00000589091 WWC3Q9ULE0 1092 aa19.53■□□□□ 0.72
DNMT1-217ENST00000589091 USPL1Q5W0Q7 1092 aa19.52■□□□□ 0.72
DNMT1-217ENST00000589091 RTF1Q92541 710 aaKnown RBP19.52■□□□□ 0.72
DNMT1-217ENST00000589091 CCDC88AQ3V6T2 1871 aa19.52■□□□□ 0.71
DNMT1-217ENST00000589091 A0A087WZG4 1122 aa19.51■□□□□ 0.71
DNMT1-217ENST00000589091 A0A0G2JLW4 131 aa19.51■□□□□ 0.71
DNMT1-217ENST00000589091 TM4SF1P30408 202 aa19.51■□□□□ 0.71
DNMT1-217ENST00000589091 C1QTNF8P60827 252 aa19.51■□□□□ 0.71
DNMT1-217ENST00000589091 DDR1Q08345 913 aa19.51■□□□□ 0.71
DNMT1-217ENST00000589091 ZNF496Q96IT1 587 aaPredicted RBP19.51■□□□□ 0.71
DNMT1-217ENST00000589091 FMNL2Q96PY5 1086 aa19.51■□□□□ 0.71
DNMT1-217ENST00000589091 BCS1LQ9Y276 419 aa19.51■□□□□ 0.71
DNMT1-217ENST00000589091 POLRMTO00411 1230 aaKnown RBP19.5■□□□□ 0.71
DNMT1-217ENST00000589091 NEFMP07197 916 aa19.5■□□□□ 0.71
DNMT1-217ENST00000589091 DPEP1P16444 411 aa19.5■□□□□ 0.71
DNMT1-217ENST00000589091 CANXP27824 592 aaKnown RBP19.5■□□□□ 0.71
DNMT1-217ENST00000589091 ANKRD31Q8N7Z5 1873 aa19.5■□□□□ 0.71
DNMT1-217ENST00000589091 KDM3BQ7LBC6 1761 aa19.49■□□□□ 0.71
DNMT1-217ENST00000589091 BTBD11A6QL63 1104 aa19.49■□□□□ 0.71
DNMT1-217ENST00000589091 HTATSF1O43719 755 aaKnown RBP19.49■□□□□ 0.71
DNMT1-217ENST00000589091 EIF5P55010 431 aaKnown RBP19.48■□□□□ 0.71
DNMT1-217ENST00000589091 PIM2Q9P1W9 311 aa19.48■□□□□ 0.71
DNMT1-217ENST00000589091 CACNA1SQ13698 1873 aa19.48■□□□□ 0.71
DNMT1-217ENST00000589091 GPBP1L1Q9HC44 474 aaPredicted RBP19.47■□□□□ 0.71
DNMT1-217ENST00000589091 IL6STP40189 918 aaPredicted RBP19.46■□□□□ 0.71
DNMT1-217ENST00000589091 NFIXQ14938 502 aa19.46■□□□□ 0.71
DNMT1-217ENST00000589091 NPM2Q86SE8 214 aaKnown RBP19.46■□□□□ 0.71
DNMT1-217ENST00000589091 KCNA3P22001 575 aa19.45■□□□□ 0.7
DNMT1-217ENST00000589091 BCL2L12Q9HB09 334 aa19.45■□□□□ 0.7
DNMT1-217ENST00000589091 DALRD3Q5D0E6 543 aaKnown RBP19.44■□□□□ 0.7
DNMT1-217ENST00000589091 MCM10Q7L590 875 aa19.44■□□□□ 0.7
DNMT1-217ENST00000589091 PNNQ9H307 717 aaKnown RBP19.44■□□□□ 0.7
DNMT1-217ENST00000589091 ARFGEF2Q9Y6D5 1785 aa19.44■□□□□ 0.7
DNMT1-217ENST00000589091 SERPINB2P05120 415 aa19.43■□□□□ 0.7
DNMT1-217ENST00000589091 ARHGAP27Q6ZUM4 889 aa19.43■□□□□ 0.7
DNMT1-217ENST00000589091 DICER1Q9UPY3 1922 aaKnown RBP19.43■□□□□ 0.7
DNMT1-217ENST00000589091 KCNQ3O43525 872 aa19.42■□□□□ 0.7
DNMT1-217ENST00000589091 ZNF330Q9Y3S2 320 aaPredicted RBP19.42■□□□□ 0.7
DNMT1-217ENST00000589091 COL11A2P13942 1736 aaPredicted RBP19.42■□□□□ 0.7
DNMT1-217ENST00000589091 NUP98P52948 1817 aa19.41■□□□□ 0.7
DNMT1-217ENST00000589091 SENP3-EIF4A1A0A087X0R7 540 aa19.41■□□□□ 0.7
DNMT1-217ENST00000589091 SNRPA1P09661 255 aaKnown RBP19.41■□□□□ 0.7
DNMT1-217ENST00000589091 RALBP1Q15311 655 aa19.41■□□□□ 0.7
DNMT1-217ENST00000589091 A1BGP04217 495 aa19.4■□□□□ 0.7
DNMT1-217ENST00000589091 CHRNA5P30532 468 aa19.4■□□□□ 0.7
DNMT1-217ENST00000589091 TAF7Q15545 349 aaPredicted RBP19.4■□□□□ 0.7
DNMT1-217ENST00000589091 CARMIL3Q8ND23 1372 aa19.4■□□□□ 0.7
DNMT1-217ENST00000589091 TNRC6CQ9HCJ0 1690 aaKnown RBP19.4■□□□□ 0.7
DNMT1-217ENST00000589091 DCTN1Q14203 1278 aa19.39■□□□□ 0.69
DNMT1-217ENST00000589091 ZNF526Q8TF50 670 aaPredicted RBP19.39■□□□□ 0.69
DNMT1-217ENST00000589091 PDZRN3Q9UPQ7 1066 aa19.39■□□□□ 0.69
DNMT1-217ENST00000589091 TBC1D2BQ9UPU7 963 aa19.39■□□□□ 0.69
DNMT1-217ENST00000589091 FER1L6Q2WGJ9 1857 aa19.39■□□□□ 0.69
DNMT1-217ENST00000589091 TBC1D9BQ66K14 1250 aa19.38■□□□□ 0.69
DNMT1-217ENST00000589091 BICDL1Q6ZP65 573 aa19.38■□□□□ 0.69
DNMT1-217ENST00000589091 TIAM2Q8IVF5 1701 aa19.38■□□□□ 0.69
DNMT1-217ENST00000589091 PNISRQ8TF01 805 aaKnown RBP19.38■□□□□ 0.69
DNMT1-217ENST00000589091 PLEKHF1Q96S99 279 aa19.38■□□□□ 0.69
DNMT1-217ENST00000589091 MAPK8IP3Q9UPT6 1336 aa19.38■□□□□ 0.69
DNMT1-217ENST00000589091 USP16Q9Y5T5 823 aa19.38■□□□□ 0.69
DNMT1-217ENST00000589091 NFE2L2Q16236 605 aa19.37■□□□□ 0.69
DNMT1-217ENST00000589091 DZIP3Q86Y13 1208 aaKnown RBP19.37■□□□□ 0.69
DNMT1-217ENST00000589091 CAMTA2O94983 1202 aa19.36■□□□□ 0.69
DNMT1-217ENST00000589091 H0YIN7 160 aa19.35■□□□□ 0.69
DNMT1-217ENST00000589091 SETDB2Q96T68 719 aa19.35■□□□□ 0.69
DNMT1-217ENST00000589091 ZNF652Q9Y2D9 606 aa19.35■□□□□ 0.69
DNMT1-217ENST00000589091 RGL2O15211 777 aa19.34■□□□□ 0.69
DNMT1-217ENST00000589091 PDE6BP35913 854 aa19.34■□□□□ 0.69
DNMT1-217ENST00000589091 C9orf131Q5VYM1 1079 aa19.34■□□□□ 0.69
DNMT1-217ENST00000589091 CLEC4GQ6UXB4 293 aa19.34■□□□□ 0.69
DNMT1-217ENST00000589091 C2CD5Q86YS7 1000 aa19.34■□□□□ 0.69
DNMT1-217ENST00000589091 TTLL6Q8N841 843 aa19.34■□□□□ 0.69
DNMT1-217ENST00000589091 SLX4Q8IY92 1834 aa19.33■□□□□ 0.69
DNMT1-217ENST00000589091 PRAMEF22A3QJZ6 481 aa19.33■□□□□ 0.68
DNMT1-217ENST00000589091 PRR5LQ6MZQ0 368 aa19.33■□□□□ 0.68
DNMT1-217ENST00000589091 BRIP1Q9BX63 1249 aa19.33■□□□□ 0.68
DNMT1-217ENST00000589091 MYBBP1AQ9BQG0 1328 aaKnown RBP19.32■□□□□ 0.68
DNMT1-217ENST00000589091 NPHP1O15259 732 aa19.32■□□□□ 0.68
DNMT1-217ENST00000589091 CNBD1Q8NA66 436 aa19.32■□□□□ 0.68
DNMT1-217ENST00000589091 KIF3CO14782 793 aa19.31■□□□□ 0.68
DNMT1-217ENST00000589091 ST5P78524 1137 aa19.31■□□□□ 0.68
DNMT1-217ENST00000589091 DDX10Q13206 875 aaKnown RBP19.31■□□□□ 0.68
DNMT1-217ENST00000589091 RNF181Q9P0P0 153 aa19.31■□□□□ 0.68
DNMT1-217ENST00000589091 ZC3H4Q9UPT8 1303 aaKnown RBP19.3■□□□□ 0.68
DNMT1-217ENST00000589091 PIP4K2AP48426 406 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms