RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 XIRP1Q702N8 1843 aaKnown RBP21.59■■□□□ 1.05
ERCC2-211ENST00000588652 GZF1Q9H116 711 aaPredicted RBP21.59■■□□□ 1.05
ERCC2-211ENST00000588652 ADCY9O60503 1353 aa21.59■■□□□ 1.05
ERCC2-211ENST00000588652 SSH3Q8TE77 659 aa21.59■■□□□ 1.05
ERCC2-211ENST00000588652 TNPO1Q92973 898 aaKnown RBP21.59■■□□□ 1.05
ERCC2-211ENST00000588652 SCN11AQ9UI33 1791 aa21.59■■□□□ 1.05
ERCC2-211ENST00000588652 RAB3GAP1Q15042 981 aa21.58■■□□□ 1.05
ERCC2-211ENST00000588652 SPATA31A3Q5VYP0 1347 aa21.58■■□□□ 1.04
ERCC2-211ENST00000588652 GOLGA6L3A6NEY3 463 aa21.58■■□□□ 1.04
ERCC2-211ENST00000588652 NBPF7P0C2Y1 421 aaPredicted RBP21.57■■□□□ 1.04
ERCC2-211ENST00000588652 MEGF6O75095 1541 aa21.57■■□□□ 1.04
ERCC2-211ENST00000588652 TUBGCP6Q96RT7 1819 aa21.57■■□□□ 1.04
ERCC2-211ENST00000588652 PRAMEF22A3QJZ6 481 aa21.57■■□□□ 1.04
ERCC2-211ENST00000588652 HSP90AA1P07900 732 aaKnown RBP21.57■■□□□ 1.04
ERCC2-211ENST00000588652 TATP17735 454 aaPredicted RBP21.57■■□□□ 1.04
ERCC2-211ENST00000588652 CASC1Q6TDU7 716 aa21.57■■□□□ 1.04
ERCC2-211ENST00000588652 ABCC6O95255 1503 aa21.57■■□□□ 1.04
ERCC2-211ENST00000588652 KDM6AO15550 1401 aaPredicted RBP21.56■■□□□ 1.04
ERCC2-211ENST00000588652 CHRNA2Q15822 529 aa21.56■■□□□ 1.04
ERCC2-211ENST00000588652 PROSER3Q2NL68 480 aa21.56■■□□□ 1.04
ERCC2-211ENST00000588652 PPP1R42Q7Z4L9 355 aa21.56■■□□□ 1.04
ERCC2-211ENST00000588652 FAM43AQ8N2R8 423 aa21.56■■□□□ 1.04
ERCC2-211ENST00000588652 USP26Q9BXU7 913 aa21.56■■□□□ 1.04
ERCC2-211ENST00000588652 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.56■■□□□ 1.04
ERCC2-211ENST00000588652 CSB-PGBD3P0DP91 1061 aa21.55■■□□□ 1.04
ERCC2-211ENST00000588652 PHKG2P15735 406 aa21.55■■□□□ 1.04
ERCC2-211ENST00000588652 POLA2Q14181 598 aa21.55■■□□□ 1.04
ERCC2-211ENST00000588652 SPG7Q9UQ90 795 aa21.55■■□□□ 1.04
ERCC2-211ENST00000588652 XRCC6P12956 609 aaKnown RBP eCLIP21.55■■□□□ 1.04
ERCC2-211ENST00000588652 MX1P20591 662 aa21.55■■□□□ 1.04
ERCC2-211ENST00000588652 SLC52A2Q9HAB3 445 aa21.54■■□□□ 1.04
ERCC2-211ENST00000588652 FOXD4L1Q9NU39 408 aa21.54■■□□□ 1.04
ERCC2-211ENST00000588652 TSHZ3Q63HK5 1081 aa21.54■■□□□ 1.04
ERCC2-211ENST00000588652 ZNF790Q6PG37 636 aa21.53■■□□□ 1.04
ERCC2-211ENST00000588652 GBP4Q96PP9 640 aa21.53■■□□□ 1.04
ERCC2-211ENST00000588652 CPDO75976 1380 aa21.53■■□□□ 1.04
ERCC2-211ENST00000588652 ARXQ96QS3 562 aa21.53■■□□□ 1.04
ERCC2-211ENST00000588652 MAP3K2Q9Y2U5 619 aa21.53■■□□□ 1.04
ERCC2-211ENST00000588652 RABEP1Q15276 862 aa21.52■■□□□ 1.04
ERCC2-211ENST00000588652 KSR2Q6VAB6 950 aa21.52■■□□□ 1.04
ERCC2-211ENST00000588652 BRINP3Q76B58 766 aa21.52■■□□□ 1.04
ERCC2-211ENST00000588652 HYPKQ9NX55 129 aa21.52■■□□□ 1.04
ERCC2-211ENST00000588652 STAP2Q9UGK3 403 aa21.52■■□□□ 1.04
ERCC2-211ENST00000588652 PLEKHG2Q9H7P9 1386 aa21.52■■□□□ 1.04
ERCC2-211ENST00000588652 SRGAP3O43295 1099 aa21.51■■□□□ 1.03
ERCC2-211ENST00000588652 IFNL2Q8IZJ0 200 aa21.51■■□□□ 1.03
ERCC2-211ENST00000588652 SURF6O75683 361 aaKnown RBP21.51■■□□□ 1.03
ERCC2-211ENST00000588652 SLC39A6Q13433 755 aa21.51■■□□□ 1.03
ERCC2-211ENST00000588652 RAB11FIP3O75154 756 aa21.5■■□□□ 1.03
ERCC2-211ENST00000588652 NFATC2IPQ8NCF5 419 aa21.5■■□□□ 1.03
ERCC2-211ENST00000588652 DDX21Q9NR30 783 aaKnown RBP eCLIP21.5■■□□□ 1.03
ERCC2-211ENST00000588652 ALDH1L1O75891 902 aa21.5■■□□□ 1.03
ERCC2-211ENST00000588652 REC8O95072 547 aa21.5■■□□□ 1.03
ERCC2-211ENST00000588652 PKD1L3Q7Z443 1732 aa21.5■■□□□ 1.03
ERCC2-211ENST00000588652 STRCQ7RTU9 1775 aa21.5■■□□□ 1.03
ERCC2-211ENST00000588652 C5P01031 1676 aa21.5■■□□□ 1.03
ERCC2-211ENST00000588652 ERC2O15083 957 aa21.49■■□□□ 1.03
ERCC2-211ENST00000588652 IL1RAPL2Q9NP60 686 aa21.49■■□□□ 1.03
ERCC2-211ENST00000588652 PDIA6Q15084 440 aa21.49■■□□□ 1.03
ERCC2-211ENST00000588652 CYP27B1O15528 508 aa21.48■■□□□ 1.03
ERCC2-211ENST00000588652 PTMSP20962 102 aa21.47■■□□□ 1.03
ERCC2-211ENST00000588652 RHPN1Q8TCX5 695 aa21.47■■□□□ 1.03
ERCC2-211ENST00000588652 DCAF5Q96JK2 942 aa21.47■■□□□ 1.03
ERCC2-211ENST00000588652 PANK2Q9BZ23 570 aa21.47■■□□□ 1.03
ERCC2-211ENST00000588652 AK9Q5TCS8 1911 aa21.47■■□□□ 1.03
ERCC2-211ENST00000588652 AOX1Q06278 1338 aa21.47■■□□□ 1.03
ERCC2-211ENST00000588652 MRC1P22897 1456 aa21.47■■□□□ 1.03
ERCC2-211ENST00000588652 MTX1Q13505 466 aa21.47■■□□□ 1.03
ERCC2-211ENST00000588652 SSFA2P28290 1259 aa21.46■■□□□ 1.03
ERCC2-211ENST00000588652 CWF19L2Q2TBE0 894 aaKnown RBP21.46■■□□□ 1.03
ERCC2-211ENST00000588652 KIF1BPQ96EK5 621 aa21.46■■□□□ 1.03
ERCC2-211ENST00000588652 C9orf78Q9NZ63 289 aaPredicted RBP21.46■■□□□ 1.03
ERCC2-211ENST00000588652 DDX58O95786 925 aaKnown RBP21.46■■□□□ 1.03
ERCC2-211ENST00000588652 MRE11P49959 708 aa21.45■■□□□ 1.02
ERCC2-211ENST00000588652 LINS1Q8NG48 757 aa21.45■■□□□ 1.02
ERCC2-211ENST00000588652 ZNF496Q96IT1 587 aaPredicted RBP21.45■■□□□ 1.02
ERCC2-211ENST00000588652 TRIM6-TRIM34B2RNG4 842 aa21.44■■□□□ 1.02
ERCC2-211ENST00000588652 AIMP1Q12904 312 aaKnown RBP21.44■■□□□ 1.02
ERCC2-211ENST00000588652 SKOR2Q2VWA4 1001 aaPredicted RBP21.44■■□□□ 1.02
ERCC2-211ENST00000588652 CLEC17AQ6ZS10 378 aa21.44■■□□□ 1.02
ERCC2-211ENST00000588652 NUTM1Q86Y26 1132 aa21.44■■□□□ 1.02
ERCC2-211ENST00000588652 RILPL2Q969X0 211 aa21.44■■□□□ 1.02
ERCC2-211ENST00000588652 HSP90AB4PQ58FF6 505 aa21.44■■□□□ 1.02
ERCC2-211ENST00000588652 ESYT1Q9BSJ8 1104 aa21.44■■□□□ 1.02
ERCC2-211ENST00000588652 ISY1Q9ULR0 285 aaKnown RBP21.44■■□□□ 1.02
ERCC2-211ENST00000588652 SOS2Q07890 1332 aaPredicted RBP21.43■■□□□ 1.02
ERCC2-211ENST00000588652 CHMLP26374 656 aa21.43■■□□□ 1.02
ERCC2-211ENST00000588652 UNC5CLQ8IV45 518 aa21.43■■□□□ 1.02
ERCC2-211ENST00000588652 SLAIN2Q9P270 581 aa21.43■■□□□ 1.02
ERCC2-211ENST00000588652 HDAC5Q9UQL6 1122 aa21.43■■□□□ 1.02
ERCC2-211ENST00000588652 GRPEL1Q9HAV7 217 aa21.42■■□□□ 1.02
ERCC2-211ENST00000588652 ANO8Q9HCE9 1232 aaPredicted RBP21.42■■□□□ 1.02
ERCC2-211ENST00000588652 PRDM11Q9NQV5 511 aa21.41■■□□□ 1.02
ERCC2-211ENST00000588652 UTYO14607 1347 aa21.41■■□□□ 1.02
ERCC2-211ENST00000588652 ZNF335Q9H4Z2 1342 aaPredicted RBP21.41■■□□□ 1.02
ERCC2-211ENST00000588652 GRM8O00222 908 aa21.41■■□□□ 1.02
ERCC2-211ENST00000588652 TTC5Q8N0Z6 440 aa21.41■■□□□ 1.02
ERCC2-211ENST00000588652 RRAGDQ9NQL2 400 aaPredicted RBP21.41■■□□□ 1.02
ERCC2-211ENST00000588652 MYL6BP14649 208 aa21.4■■□□□ 1.02
ERCC2-211ENST00000588652 PI4K2BQ8TCG2 481 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms