RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 TRIM52Q96A61 297 aa6.97□□□□□ -1.29
LINC01538-201ENST00000588074 G3BP2Q9UN86 482 aaKnown RBP6.97□□□□□ -1.29
LINC01538-201ENST00000588074 INPP5FQ9Y2H2 1132 aa6.97□□□□□ -1.29
LINC01538-201ENST00000588074 FAN1Q9Y2M0 1017 aa6.97□□□□□ -1.29
LINC01538-201ENST00000588074 F12P00748 615 aaPredicted RBP6.97□□□□□ -1.29
LINC01538-201ENST00000588074 ATP1A2P50993 1020 aa6.97□□□□□ -1.29
LINC01538-201ENST00000588074 ARID5AQ03989 594 aa6.97□□□□□ -1.29
LINC01538-201ENST00000588074 PSMD2Q13200 908 aa6.97□□□□□ -1.29
LINC01538-201ENST00000588074 RETREG3Q86VR2 466 aa6.97□□□□□ -1.29
LINC01538-201ENST00000588074 IFT57Q9NWB7 429 aa6.97□□□□□ -1.29
LINC01538-201ENST00000588074 NOD1Q9Y239 953 aa6.97□□□□□ -1.29
LINC01538-201ENST00000588074 WEE1P30291 646 aa6.96□□□□□ -1.3
LINC01538-201ENST00000588074 GORABQ5T7V8 394 aa6.96□□□□□ -1.3
LINC01538-201ENST00000588074 CASC1Q6TDU7 716 aa6.96□□□□□ -1.3
LINC01538-201ENST00000588074 HELQQ8TDG4 1101 aa6.96□□□□□ -1.3
LINC01538-201ENST00000588074 PCDH12Q9NPG4 1184 aa6.96□□□□□ -1.3
LINC01538-201ENST00000588074 BSDC1Q9NW68 430 aaPredicted RBP6.96□□□□□ -1.3
LINC01538-201ENST00000588074 CGNQ9P2M7 1197 aaKnown RBP6.96□□□□□ -1.3
LINC01538-201ENST00000588074 CTSHP09668 335 aa6.96□□□□□ -1.3
LINC01538-201ENST00000588074 FGRP09769 529 aa6.96□□□□□ -1.3
LINC01538-201ENST00000588074 MAP2K1Q02750 393 aaPredicted RBP6.96□□□□□ -1.3
LINC01538-201ENST00000588074 FILIP1Q7Z7B0 1213 aa6.96□□□□□ -1.3
LINC01538-201ENST00000588074 TRIM50Q86XT4 487 aa6.96□□□□□ -1.3
LINC01538-201ENST00000588074 CCDC194A0A1B0GVG4 234 aa6.95□□□□□ -1.3
LINC01538-201ENST00000588074 CCDC66A2RUB6 948 aa6.95□□□□□ -1.3
LINC01538-201ENST00000588074 XRCC6P12956 609 aaKnown RBP eCLIP6.95□□□□□ -1.3
LINC01538-201ENST00000588074 PLEKHG6Q3KR16 790 aa6.95□□□□□ -1.3
LINC01538-201ENST00000588074 PUS10Q3MIT2 529 aaKnown RBP6.95□□□□□ -1.3
LINC01538-201ENST00000588074 ASTLQ6HA08 431 aaPredicted RBP6.95□□□□□ -1.3
LINC01538-201ENST00000588074 NBPF10Q6P3W6 841 aaKnown RBP6.95□□□□□ -1.3
LINC01538-201ENST00000588074 OTUD6BQ8N6M0 293 aa6.95□□□□□ -1.3
LINC01538-201ENST00000588074 TMC1Q8TDI8 760 aa6.95□□□□□ -1.3
LINC01538-201ENST00000588074 RBM28Q9NW13 759 aaKnown RBP6.95□□□□□ -1.3
LINC01538-201ENST00000588074 DDX41Q9UJV9 622 aaKnown RBP6.95□□□□□ -1.3
LINC01538-201ENST00000588074 SSR1P43307 286 aaKnown RBP6.95□□□□□ -1.3
LINC01538-201ENST00000588074 CHRDL2Q6WN34 429 aa6.95□□□□□ -1.3
LINC01538-201ENST00000588074 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.95□□□□□ -1.3
LINC01538-201ENST00000588074 PCDHGA11Q9Y5H2 935 aa6.95□□□□□ -1.3
LINC01538-201ENST00000588074 PHLDB1Q86UU1 1377 aa6.94□□□□□ -1.3
LINC01538-201ENST00000588074 POTEFA5A3E0 1075 aa6.94□□□□□ -1.3
LINC01538-201ENST00000588074 MRE11P49959 708 aa6.94□□□□□ -1.3
LINC01538-201ENST00000588074 GNL2Q13823 731 aaKnown RBP6.94□□□□□ -1.3
LINC01538-201ENST00000588074 DESI1Q6ICB0 168 aa6.94□□□□□ -1.3
LINC01538-201ENST00000588074 EVI5LQ96CN4 794 aa6.94□□□□□ -1.3
LINC01538-201ENST00000588074 MYCBPQ99417 103 aaPredicted RBP6.94□□□□□ -1.3
LINC01538-201ENST00000588074 SAP130Q9H0E3 1048 aa6.94□□□□□ -1.3
LINC01538-201ENST00000588074 TERF2IPQ9NYB0 399 aa6.94□□□□□ -1.3
LINC01538-201ENST00000588074 CEP83Q9Y592 693 aa6.94□□□□□ -1.3
LINC01538-201ENST00000588074 BAZ1BQ9UIG0 1483 aaKnown RBP6.94□□□□□ -1.3
LINC01538-201ENST00000588074 C19orf67A6NJJ6 358 aa6.93□□□□□ -1.3
LINC01538-201ENST00000588074 GOLIM4O00461 696 aa6.93□□□□□ -1.3
LINC01538-201ENST00000588074 FRAT2O75474 233 aaPredicted RBP6.93□□□□□ -1.3
LINC01538-201ENST00000588074 NPR3P17342 541 aa6.93□□□□□ -1.3
LINC01538-201ENST00000588074 IBSPP21815 317 aaPredicted RBP6.93□□□□□ -1.3
LINC01538-201ENST00000588074 HSD3B2P26439 372 aa6.93□□□□□ -1.3
LINC01538-201ENST00000588074 MAP7D1Q3KQU3 841 aa6.93□□□□□ -1.3
LINC01538-201ENST00000588074 RNF19BQ6ZMZ0 732 aa6.93□□□□□ -1.3
LINC01538-201ENST00000588074 PMM1Q92871 262 aa6.93□□□□□ -1.3
LINC01538-201ENST00000588074 PRKD2Q9BZL6 878 aa6.93□□□□□ -1.3
LINC01538-201ENST00000588074 IRF2BPLQ9H1B7 796 aa6.93□□□□□ -1.3
LINC01538-201ENST00000588074 TULP2O00295 520 aa6.93□□□□□ -1.3
LINC01538-201ENST00000588074 ZNF500O60304 480 aaPredicted RBP6.93□□□□□ -1.3
LINC01538-201ENST00000588074 CFHP08603 1231 aa6.93□□□□□ -1.3
LINC01538-201ENST00000588074 NBPF6Q5VWK0 638 aa6.93□□□□□ -1.3
LINC01538-201ENST00000588074 PACS2Q86VP3 889 aa6.93□□□□□ -1.3
LINC01538-201ENST00000588074 NBPF5PQ86XG9 351 aaPredicted RBP6.93□□□□□ -1.3
LINC01538-201ENST00000588074 NBPF4Q96M43 638 aa6.93□□□□□ -1.3
LINC01538-201ENST00000588074 DOLKQ9UPQ8 538 aa6.93□□□□□ -1.3
LINC01538-201ENST00000588074 PEG3Q9GZU2 1588 aa6.93□□□□□ -1.3
LINC01538-201ENST00000588074 FZD6O60353 706 aa6.92□□□□□ -1.3
LINC01538-201ENST00000588074 CBLBQ13191 982 aa6.92□□□□□ -1.3
LINC01538-201ENST00000588074 ZKSCAN8Q15776 578 aaPredicted RBP6.92□□□□□ -1.3
LINC01538-201ENST00000588074 SLC27A5Q9Y2P5 690 aa6.92□□□□□ -1.3
LINC01538-201ENST00000588074 ATP6V1AP38606 617 aa6.92□□□□□ -1.3
LINC01538-201ENST00000588074 CCDC181Q5TID7 509 aa6.92□□□□□ -1.3
LINC01538-201ENST00000588074 C3orf67Q6ZVT6 689 aa6.92□□□□□ -1.3
LINC01538-201ENST00000588074 SRA1Q9HD15 236 aaKnown RBP6.92□□□□□ -1.3
LINC01538-201ENST00000588074 KIF3AQ9Y496 699 aa6.92□□□□□ -1.3
LINC01538-201ENST00000588074 CECR2Q9BXF3 1484 aa6.92□□□□□ -1.3
LINC01538-201ENST00000588074 NDUFB5O43674 189 aa6.91□□□□□ -1.3
LINC01538-201ENST00000588074 STK10O94804 968 aaKnown RBP6.91□□□□□ -1.3
LINC01538-201ENST00000588074 KCNJ4P48050 445 aa6.91□□□□□ -1.3
LINC01538-201ENST00000588074 PLCB3Q01970 1234 aa6.91□□□□□ -1.3
LINC01538-201ENST00000588074 ARSIQ5FYB1 569 aa6.91□□□□□ -1.3
LINC01538-201ENST00000588074 CTR9Q6PD62 1173 aa6.91□□□□□ -1.3
LINC01538-201ENST00000588074 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.91□□□□□ -1.3
LINC01538-201ENST00000588074 ADAM32Q8TC27 787 aa6.91□□□□□ -1.3
LINC01538-201ENST00000588074 TIGD1Q96MW7 591 aa6.91□□□□□ -1.3
LINC01538-201ENST00000588074 ERBB4Q15303 1308 aa6.91□□□□□ -1.3
LINC01538-201ENST00000588074 ANP32CO43423 234 aa6.91□□□□□ -1.3
LINC01538-201ENST00000588074 CCDC172P0C7W6 258 aa6.91□□□□□ -1.3
LINC01538-201ENST00000588074 BLOC1S3Q6QNY0 202 aa6.91□□□□□ -1.3
LINC01538-201ENST00000588074 CFHR5Q9BXR6 569 aa6.91□□□□□ -1.3
LINC01538-201ENST00000588074 KANSL2Q9H9L4 492 aa6.91□□□□□ -1.3
LINC01538-201ENST00000588074 BCL2L12Q9HB09 334 aa6.91□□□□□ -1.3
LINC01538-201ENST00000588074 PRR12Q9ULL5 1215 aa6.91□□□□□ -1.3
LINC01538-201ENST00000588074 NINLQ9Y2I6 1382 aa6.91□□□□□ -1.3
LINC01538-201ENST00000588074 K7ELQ4 463 aaPredicted RBP6.9□□□□□ -1.3
LINC01538-201ENST00000588074 RNF187Q5TA31 235 aaPredicted RBP6.9□□□□□ -1.3
LINC01538-201ENST00000588074 USP48Q86UV5 1035 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms