RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 APBA3O96018 575 aa23.64■■□□□ 1.37
H3F3B-206ENST00000587560 SIK1P57059 783 aa23.64■■□□□ 1.37
H3F3B-206ENST00000587560 PTCD1O75127 700 aaKnown RBP23.63■■□□□ 1.37
H3F3B-206ENST00000587560 SNRPA1P09661 255 aaKnown RBP23.63■■□□□ 1.37
H3F3B-206ENST00000587560 TWISTNBQ3B726 338 aaPredicted RBP23.63■■□□□ 1.37
H3F3B-206ENST00000587560 CACNA1FO60840 1977 aa23.62■■□□□ 1.37
H3F3B-206ENST00000587560 PROM2Q8N271 834 aa23.61■■□□□ 1.37
H3F3B-206ENST00000587560 MYH14Q7Z406 1995 aaKnown RBP23.61■■□□□ 1.37
H3F3B-206ENST00000587560 ITPK1Q13572 414 aa23.6■■□□□ 1.37
H3F3B-206ENST00000587560 ELL2O00472 640 aaPredicted RBP23.59■■□□□ 1.37
H3F3B-206ENST00000587560 ZNF428Q96B54 188 aa23.59■■□□□ 1.37
H3F3B-206ENST00000587560 RBM42Q9BTD8 480 aaKnown RBP23.59■■□□□ 1.37
H3F3B-206ENST00000587560 USP16Q9Y5T5 823 aa23.59■■□□□ 1.37
H3F3B-206ENST00000587560 DNAJC10Q8IXB1 793 aa23.58■■□□□ 1.37
H3F3B-206ENST00000587560 TEX13AQ9BXU3 409 aaPredicted RBP23.58■■□□□ 1.37
H3F3B-206ENST00000587560 LRRC4BQ9NT99 713 aa23.57■■□□□ 1.36
H3F3B-206ENST00000587560 CYP19A1P11511 503 aaPredicted RBP23.56■■□□□ 1.36
H3F3B-206ENST00000587560 ATP6V1AP38606 617 aa23.56■■□□□ 1.36
H3F3B-206ENST00000587560 SLC27A3Q5K4L6 730 aa23.56■■□□□ 1.36
H3F3B-206ENST00000587560 RARSP54136 660 aaKnown RBP23.55■■□□□ 1.36
H3F3B-206ENST00000587560 PDIA6Q15084 440 aa23.55■■□□□ 1.36
H3F3B-206ENST00000587560 C4BP0C0L5 1744 aa23.54■■□□□ 1.36
H3F3B-206ENST00000587560 BRPF1P55201 1214 aaPredicted RBP23.54■■□□□ 1.36
H3F3B-206ENST00000587560 TXNRD1Q16881 649 aa23.54■■□□□ 1.36
H3F3B-206ENST00000587560 ALDH1L2Q3SY69 923 aa23.54■■□□□ 1.36
H3F3B-206ENST00000587560 LRP10Q7Z4F1 713 aa23.54■■□□□ 1.36
H3F3B-206ENST00000587560 LINC00116Q8NCU8 138 aa23.54■■□□□ 1.36
H3F3B-206ENST00000587560 CCNL1Q9UK58 526 aaPredicted RBP23.54■■□□□ 1.36
H3F3B-206ENST00000587560 ERBB4Q15303 1308 aa23.54■■□□□ 1.36
H3F3B-206ENST00000587560 SYT17Q9BSW7 474 aa23.53■■□□□ 1.36
H3F3B-206ENST00000587560 KCNQ4P56696 695 aa23.52■■□□□ 1.36
H3F3B-206ENST00000587560 HDGFL1Q5TGJ6 251 aa23.52■■□□□ 1.36
H3F3B-206ENST00000587560 CNTNAP4Q9C0A0 1308 aa23.52■■□□□ 1.36
H3F3B-206ENST00000587560 GOLGB1Q14789 3259 aaKnown RBP23.51■■□□□ 1.35
H3F3B-206ENST00000587560 NBPF26B4DH59 902 aa23.51■■□□□ 1.35
H3F3B-206ENST00000587560 PTGER2P43116 358 aa23.51■■□□□ 1.35
H3F3B-206ENST00000587560 CCDC30Q5VVM6 783 aa23.51■■□□□ 1.35
H3F3B-206ENST00000587560 NBPF10Q6P3W6 841 aaKnown RBP23.51■■□□□ 1.35
H3F3B-206ENST00000587560 INTS5Q6P9B9 1019 aaKnown RBP23.51■■□□□ 1.35
H3F3B-206ENST00000587560 NBPF15Q8N660 670 aa23.51■■□□□ 1.35
H3F3B-206ENST00000587560 SSH1Q8WYL5 1049 aa23.51■■□□□ 1.35
H3F3B-206ENST00000587560 CHMP4AQ9BY43 222 aa23.51■■□□□ 1.35
H3F3B-206ENST00000587560 UBR3Q6ZT12 1888 aa23.5■■□□□ 1.35
H3F3B-206ENST00000587560 STARD3NLO95772 234 aa23.5■■□□□ 1.35
H3F3B-206ENST00000587560 RC3H1Q5TC82 1133 aaKnown RBP23.5■■□□□ 1.35
H3F3B-206ENST00000587560 FHDC1Q9C0D6 1143 aaPredicted RBP23.5■■□□□ 1.35
H3F3B-206ENST00000587560 RCAN3Q9UKA8 241 aa23.5■■□□□ 1.35
H3F3B-206ENST00000587560 A1BGP04217 495 aa23.49■■□□□ 1.35
H3F3B-206ENST00000587560 EIF2S2P20042 333 aaKnown RBP23.49■■□□□ 1.35
H3F3B-206ENST00000587560 MRPL50Q8N5N7 158 aaKnown RBP23.49■■□□□ 1.35
H3F3B-206ENST00000587560 PDGFDQ9GZP0 370 aaPredicted RBP23.49■■□□□ 1.35
H3F3B-206ENST00000587560 DDX21Q9NR30 783 aaKnown RBP eCLIP23.49■■□□□ 1.35
H3F3B-206ENST00000587560 CRKLP46109 303 aaKnown RBP23.48■■□□□ 1.35
H3F3B-206ENST00000587560 PROSER3Q2NL68 480 aa23.48■■□□□ 1.35
H3F3B-206ENST00000587560 CHPF2Q9P2E5 772 aa23.48■■□□□ 1.35
H3F3B-206ENST00000587560 DBF4Q9UBU7 674 aaPredicted RBP23.48■■□□□ 1.35
H3F3B-206ENST00000587560 SLC34A2O95436 690 aa23.47■■□□□ 1.35
H3F3B-206ENST00000587560 CCDC87Q9NVE4 849 aa23.47■■□□□ 1.35
H3F3B-206ENST00000587560 TUBGCP6Q96RT7 1819 aa23.47■■□□□ 1.35
H3F3B-206ENST00000587560 NECTIN2Q92692 538 aa23.46■■□□□ 1.35
H3F3B-206ENST00000587560 ZBTB1Q9Y2K1 713 aa23.46■■□□□ 1.35
H3F3B-206ENST00000587560 TCERG1O14776 1098 aaKnown RBP23.45■■□□□ 1.34
H3F3B-206ENST00000587560 BCAR3O75815 825 aa23.45■■□□□ 1.34
H3F3B-206ENST00000587560 QSER1Q2KHR3 1735 aa23.45■■□□□ 1.34
H3F3B-206ENST00000587560 RNF123Q5XPI4 1314 aa23.44■■□□□ 1.34
H3F3B-206ENST00000587560 HMGB2P26583 209 aaKnown RBP23.44■■□□□ 1.34
H3F3B-206ENST00000587560 ZBTB7AO95365 584 aa23.43■■□□□ 1.34
H3F3B-206ENST00000587560 ANXA1P04083 346 aa23.43■■□□□ 1.34
H3F3B-206ENST00000587560 SLC4A2P04920 1241 aa23.43■■□□□ 1.34
H3F3B-206ENST00000587560 IL6STP40189 918 aaPredicted RBP23.43■■□□□ 1.34
H3F3B-206ENST00000587560 EIF5P55010 431 aaKnown RBP23.43■■□□□ 1.34
H3F3B-206ENST00000587560 G2E3Q7L622 706 aa23.43■■□□□ 1.34
H3F3B-206ENST00000587560 AKT1S1Q96B36 256 aa23.43■■□□□ 1.34
H3F3B-206ENST00000587560 STK31Q9BXU1 1019 aa23.43■■□□□ 1.34
H3F3B-206ENST00000587560 HYPKQ9NX55 129 aa23.43■■□□□ 1.34
H3F3B-206ENST00000587560 CENPBP07199 599 aaPredicted RBP23.42■■□□□ 1.34
H3F3B-206ENST00000587560 PIP4K2AP48426 406 aaPredicted RBP23.42■■□□□ 1.34
H3F3B-206ENST00000587560 BCL2L13Q9BXK5 485 aa23.42■■□□□ 1.34
H3F3B-206ENST00000587560 ANO8Q9HCE9 1232 aaPredicted RBP23.42■■□□□ 1.34
H3F3B-206ENST00000587560 SMC4Q9NTJ3 1288 aa23.42■■□□□ 1.34
H3F3B-206ENST00000587560 RPS6KA4O75676 772 aa23.41■■□□□ 1.34
H3F3B-206ENST00000587560 CAPN15O75808 1086 aa23.41■■□□□ 1.34
H3F3B-206ENST00000587560 AMIGO3Q86WK7 504 aa23.41■■□□□ 1.34
H3F3B-206ENST00000587560 PHAXQ9H814 394 aaKnown RBP23.41■■□□□ 1.34
H3F3B-206ENST00000587560 C4AP0C0L4 1744 aa23.41■■□□□ 1.34
H3F3B-206ENST00000587560 HSPA6P17066 643 aa23.4■■□□□ 1.34
H3F3B-206ENST00000587560 ZNF827Q17R98 1081 aa23.39■■□□□ 1.33
H3F3B-206ENST00000587560 ATF5Q9Y2D1 282 aaPredicted RBP23.39■■□□□ 1.33
H3F3B-206ENST00000587560 BCORQ6W2J9 1755 aa23.39■■□□□ 1.33
H3F3B-206ENST00000587560 MYL6BP14649 208 aa23.38■■□□□ 1.33
H3F3B-206ENST00000587560 CANXP27824 592 aaKnown RBP23.38■■□□□ 1.33
H3F3B-206ENST00000587560 FLIIQ13045 1269 aa23.38■■□□□ 1.33
H3F3B-206ENST00000587560 ARHGAP45Q92619 1136 aa23.38■■□□□ 1.33
H3F3B-206ENST00000587560 N4BP2Q86UW6 1770 aaPredicted RBP23.37■■□□□ 1.33
H3F3B-206ENST00000587560 KIF16BQ96L93 1317 aa23.37■■□□□ 1.33
H3F3B-206ENST00000587560 ARFGEF2Q9Y6D5 1785 aa23.37■■□□□ 1.33
H3F3B-206ENST00000587560 PTPRCP08575 1304 aa23.36■■□□□ 1.33
H3F3B-206ENST00000587560 XAGE3Q8WTP9 111 aa23.36■■□□□ 1.33
H3F3B-206ENST00000587560 NOB1Q9ULX3 412 aaKnown RBP23.36■■□□□ 1.33
H3F3B-206ENST00000587560 COL15A1P39059 1388 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 235.6 ms